Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0582
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 138 5e-33
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 129 2e-30
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 128 3e-30
09_06_0359 + 22508900-22509439 112 2e-25
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 107 8e-24
02_01_0160 + 1116160-1116678 100 1e-21
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 85 4e-17
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 84 9e-17
10_01_0309 + 3417602-3418147 80 1e-15
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 80 1e-15
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 77 1e-14
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 71 7e-13
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 71 9e-13
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 69 5e-12
06_01_0214 + 1634171-1634173,1634263-1634742 64 1e-10
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 58 7e-09
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 52 4e-07
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 44 1e-04
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 44 1e-04
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 31 1.2
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 138 bits (333), Expect = 5e-33
Identities = 72/140 (51%), Positives = 89/140 (63%), Gaps = 5/140 (3%)
Frame = +1
Query: 175 FIASAKSD--EIPKGPKVTHKVSFDMXIGDD---NIGTIVIGLFGKTVPKTTXNFFQLAQ 339
F++SA +D E+ K+T+KV FD+ IG+ N+G +VIGL+G VP+T NF L
Sbjct: 64 FVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCT 123
Query: 340 KPEGEGYKGSKXHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMA 519
+G GYKGS HRVI +FMIQ + IYG +DENFKL H G G SMA
Sbjct: 124 GEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMA 183
Query: 520 NAGXDTNGSQFFITTVKTPW 579
NAG +TNGSQFFI TVKTPW
Sbjct: 184 NAGPNTNGSQFFICTVKTPW 203
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 129 bits (311), Expect = 2e-30
Identities = 66/123 (53%), Positives = 75/123 (60%)
Frame = +1
Query: 217 KVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNF 396
KV K FD+ +G + G IVIGLFG+ VPKT NF L +G GYKG HR+I +F
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDF 122
Query: 397 MIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTVKTP 576
MIQ R IYGE +DENF LKH G G SMANAG DTNGSQFFI TVK
Sbjct: 123 MIQGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTVKFS 182
Query: 577 WFR 585
F+
Sbjct: 183 HFK 185
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 128 bits (310), Expect = 3e-30
Identities = 71/143 (49%), Positives = 83/143 (58%), Gaps = 7/143 (4%)
Frame = +1
Query: 172 LFIASAKSDEIPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEG 351
L +A AK + +VTHKV FD+ I G +V+GLFGKTVPKT NF L +G
Sbjct: 34 LALAQAKKSKADL-TEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKG 92
Query: 352 EG-------YKGSKXHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWX 510
G +KGS HR+I +FMIQ IYG + DENFK+KH G G
Sbjct: 93 TGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLL 152
Query: 511 SMANAGXDTNGSQFFITTVKTPW 579
SMANAG DTNGSQFFITTV T W
Sbjct: 153 SMANAGRDTNGSQFFITTVTTSW 175
>09_06_0359 + 22508900-22509439
Length = 179
Score = 112 bits (270), Expect = 2e-25
Identities = 61/124 (49%), Positives = 70/124 (56%), Gaps = 7/124 (5%)
Frame = +1
Query: 229 KVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------YKGSKXHRVI 387
KV FD+ IG G +V+ LF TVPKT NF L +G G YKGS HR+I
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 388 XNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTV 567
NFM Q IYG+R DENFKL+H G G SMANAG +TNGSQFFI T
Sbjct: 67 PNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTT 126
Query: 568 KTPW 579
+T W
Sbjct: 127 RTTW 130
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 107 bits (257), Expect = 8e-24
Identities = 61/125 (48%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Frame = +1
Query: 217 KVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------YKGSKX 375
KVT KV FD+ I G IV+GLFG TVPKT NF + +G G YKG+
Sbjct: 37 KVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPF 96
Query: 376 HRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFF 555
HR+I FMIQ IYG DENFK+ H G SMAN DTNGSQFF
Sbjct: 97 HRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQFF 156
Query: 556 ITTVK 570
ITTVK
Sbjct: 157 ITTVK 161
>02_01_0160 + 1116160-1116678
Length = 172
Score = 100 bits (239), Expect = 1e-21
Identities = 57/124 (45%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Frame = +1
Query: 229 KVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------YKGSKXHRVI 387
+V FDM +G G IV+ L+ K VP+T NF L +G G YKGS HRVI
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVI 64
Query: 388 XNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTV 567
FM Q IYGE+ DE FK KH G SMANAG +TNGSQFFI TV
Sbjct: 65 PEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFICTV 124
Query: 568 KTPW 579
W
Sbjct: 125 PCSW 128
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 85.4 bits (202), Expect = 4e-17
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 22/167 (13%)
Frame = +1
Query: 142 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXN 321
GT T A +A+ K +E + D+ IG D G IV+ L+ P+T N
Sbjct: 7 GTTTAAAAAA--VAAGKEEEAEVVVVRNPRCYLDVSIGGDMEGRIVVELYASVAPRTAEN 64
Query: 322 FFQLAQKPEGEGY----------------------KGSKXHRVIXNFMIQXXXXXXXXXX 435
F L +G KGS HR++ FM+Q
Sbjct: 65 FRALCTGEKGVSAATGVPLHYKISLKAASVCTRWTKGSCIHRIVKGFMVQGGDITAGDGT 124
Query: 436 XXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTVKTP 576
IYG EDENF LKH G SMANAG DTNGSQFFITT +TP
Sbjct: 125 GGESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRTP 171
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 84.2 bits (199), Expect = 9e-17
Identities = 52/118 (44%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Frame = +1
Query: 232 VSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG--------YKGSKXHRVI 387
V D+ IGD+ +V LF P+T NF L G G YKGS HRVI
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 388 XNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFIT 561
FM Q IYG EDENF L+H G SMANAG +TNGSQFFIT
Sbjct: 69 KGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFIT 126
>10_01_0309 + 3417602-3418147
Length = 181
Score = 80.2 bits (189), Expect = 1e-15
Identities = 51/131 (38%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Frame = +1
Query: 217 KVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLA--QKPEGEG-----YKGSKX 375
K +V D+ IG + +G +VI L VP T NF +L ++ G YKGS
Sbjct: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
Query: 376 HRVIXNFMIQXXXXXXXXXXXXRIIY---GERXEDENFKLKHYGAGWXSMANAGXDTNGS 546
HRV+ FM Q DE F +KH G G SMANAG +TNGS
Sbjct: 68 HRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGS 127
Query: 547 QFFITTVKTPW 579
QFFIT K PW
Sbjct: 128 QFFITVDKAPW 138
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 80.2 bits (189), Expect = 1e-15
Identities = 55/130 (42%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Frame = +1
Query: 214 PKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------YKGSK 372
P VT++V D+ I +IG IVIGL+G VPKT NF L EG G YKGS+
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
Query: 373 XHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAG-WXSMANAGXDTNGSQ 549
HR+I FMIQ I+ G+ G G +MAN+G D+NGSQ
Sbjct: 94 FHRIIPGFMIQGGD----------IVRGD------------GKGSVIAMANSGPDSNGSQ 131
Query: 550 FFITTVKTPW 579
F+ITT+KT W
Sbjct: 132 FYITTIKTSW 141
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = +1
Query: 361 KGSKXHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTN 540
+GS HRVI FM+Q IYG + EDENF LKH G SMAN+G +TN
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTN 177
Query: 541 GSQFFITTVKTP 576
GSQFFITT +TP
Sbjct: 178 GSQFFITTTRTP 189
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 178 IASAKSDEIP-KGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGE 354
+ASA + E+ K P+ D+ IG + G IVI L+ VP+T NF L +G
Sbjct: 13 VASAAAAEVEVKNPRCF----MDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGV 68
Query: 355 G 357
G
Sbjct: 69 G 69
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 71.3 bits (167), Expect = 7e-13
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +1
Query: 256 DDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQXXXXXXXXXX 435
+ ++G I ++ K PKT NF +L+++ Y HR+I +F++Q
Sbjct: 15 ETSMGAFTIEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQGGDPTGTGRG 71
Query: 436 XXRIIYGERXEDE-NFKLKHYGAGWXSMANAGXDTNGSQFFIT 561
I YG + EDE +LKH GAG SMANAG +TNGSQFFIT
Sbjct: 72 GESI-YGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFIT 113
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 70.9 bits (166), Expect = 9e-13
Identities = 45/112 (40%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Frame = +1
Query: 205 PKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLA---QKPEG--EGYKGS 369
P PK V FD+ IG G I + LF VPKT NF Q + G +GYKG
Sbjct: 31 PPNPK-NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGC 89
Query: 370 KXHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANA 525
+ HRVI +FMIQ IYG + +DENF KH G G SM +
Sbjct: 90 QFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 68.5 bits (160), Expect = 5e-12
Identities = 46/114 (40%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = +1
Query: 241 DMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQXXXXX 420
D + ++G I + L+ + PKT NF + Y HRVI FMIQ
Sbjct: 496 DNLVMHTSMGDIHLRLYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQTGDPL 552
Query: 421 XXXXXXXRIIYGERXEDENFK-LKHYGAGWXSMANAGXDTNGSQFFITTVKTPW 579
+ I+G EDE K L+H SMANAG +TNGSQFFITTV TPW
Sbjct: 553 GDGTGG-QSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPW 605
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 63.7 bits (148), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +1
Query: 262 NIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQXXXXXXXXXXXX 441
N+G I +F P+T NF L Y G+ HR I FMIQ
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQGGDPTGTGKGGT 64
Query: 442 RIIYGERXEDE-NFKLKHYGAGWXSMANAGXDTNGSQFFITTVKTP 576
I +G++ DE LKH G SMAN+G +TNGSQFFIT K P
Sbjct: 65 SI-WGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQP 109
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 58.0 bits (134), Expect = 7e-09
Identities = 47/127 (37%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Frame = +1
Query: 199 EIPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXH 378
++ K PK V GD N+ L P+T NF E Y G H
Sbjct: 336 KVEKNPKKKGYVQLHTTHGDLNLE-----LHCDITPRTCENFLTHC---ENGYYNGLIFH 387
Query: 379 RVIXNFMIQXXXXXXXXXXXXRIIYGERXEDE-NFKLKHYGAGWXSMANAGXDTNGSQFF 555
R I NFMIQ I +G+ +DE N KL H G G SMAN+G TNGSQFF
Sbjct: 388 RSIKNFMIQGGDPTGTGSGGESI-WGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFF 446
Query: 556 ITTVKTP 576
I P
Sbjct: 447 ILYKSAP 453
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 52.0 bits (119), Expect = 4e-07
Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +1
Query: 268 GTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQXXXXXXXXXXXXRI 447
G + I L+ K PK NF QL EG Y G+ HRVI +F++Q
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQ-GGDPTGSGTGGES 77
Query: 448 IYGERXEDE-NFKLKHYGAGWXSMANAG-XDTNGSQFFITTVKTPW 579
IYG DE + +L+ G + ANAG +NGSQFFI+ + W
Sbjct: 78 IYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDW 123
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +1
Query: 202 IPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------- 357
+PK K H V FD+ IG I LF VPKTT NF L G G
Sbjct: 1 MPKAKKNPH-VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLY 59
Query: 358 YKGSKXHRVIXNFMIQ 405
+KG+ HR++ FM Q
Sbjct: 60 FKGTNMHRILKGFMAQ 75
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Frame = +1
Query: 262 NIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQXXXXXXXXXXXX 441
++G I + L P TT NF +L + + Y G H+V +F+ Q
Sbjct: 8 SVGDIEVDLHTDMCPLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQTGDPTGTGAGGD 64
Query: 442 RI---IYGE--RXEDENFK--LKHYGAGWXSMANAGXDTNGSQFFIT 561
+ +YG+ R D+ + L+H G +MA+AG + N SQF+IT
Sbjct: 65 SVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYIT 111
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 481 KLKHYGAGWXSMANAGXDTNGSQFFIT 561
+L+H G +MA+AG + N SQF+IT
Sbjct: 115 ELRHSKMGTIAMASAGENCNASQFYIT 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,096,577
Number of Sequences: 37544
Number of extensions: 252251
Number of successful extensions: 436
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -