Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0582
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 138 3e-33
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 134 7e-32
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 133 9e-32
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 127 8e-30
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 125 3e-29
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 111 6e-25
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 108 4e-24
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 107 7e-24
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 106 2e-23
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 104 7e-23
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 98 6e-21
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 97 7e-21
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 95 4e-20
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 93 1e-19
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 93 1e-19
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 73 1e-13
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 69 4e-12
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 66 2e-11
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 62 3e-10
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 57 1e-08
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 50 1e-06
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 47 1e-05
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 42 4e-04
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 37 0.011
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 32 0.42
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 32 0.42
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 32 0.42
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 30 1.7
At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5) i... 28 6.8
At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5) i... 28 6.8
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 138 bits (334), Expect = 3e-33
Identities = 79/160 (49%), Positives = 96/160 (60%), Gaps = 7/160 (4%)
Frame = +1
Query: 121 TKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKT 300
+ + L++ +L + LG L I + KS E K ++THKV FD+ I G IV+GLFGKT
Sbjct: 3 SSVTLLLWSLLL-LGTLSAIQAKKSKENLK--EITHKVYFDVEIDGKAAGRIVMGLFGKT 59
Query: 301 VPKTTXNFFQLAQKPEGEG-------YKGSKXHRVIXNFMIQXXXXXXXXXXXXRIIYGE 459
VPKT NF L +G G YKGS HR+I +FM+Q IYGE
Sbjct: 60 VPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGE 119
Query: 460 RXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTVKTPW 579
+ DENFKLKH G G+ SMANAG DTNGSQFFITTV T W
Sbjct: 120 KFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSW 159
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 134 bits (323), Expect = 7e-32
Identities = 69/134 (51%), Positives = 83/134 (61%)
Frame = +1
Query: 178 IASAKSDEIPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG 357
+A+ + + I KVT+KV FD+ IG + G IV+GLFG+ VPKT NF L + G
Sbjct: 79 MAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG 138
Query: 358 YKGSKXHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDT 537
YKGS HR+I +FMIQ IYG + EDENF LKH G G SMANAG +T
Sbjct: 139 YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNT 198
Query: 538 NGSQFFITTVKTPW 579
NGSQFFI TVKT W
Sbjct: 199 NGSQFFICTVKTSW 212
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 133 bits (322), Expect = 9e-32
Identities = 74/141 (52%), Positives = 86/141 (60%), Gaps = 7/141 (4%)
Frame = +1
Query: 178 IASAKSDEIPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG 357
IAS ++ E K +VTHKV FD+ I + G +VIGLFGK VPKT NF L +G G
Sbjct: 18 IASIQAKEDLK--EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVG 75
Query: 358 -------YKGSKXHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSM 516
YKGSK HR+I +FMIQ IYG++ DENFKLKH G G SM
Sbjct: 76 KSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSM 135
Query: 517 ANAGXDTNGSQFFITTVKTPW 579
AN+G DTNGSQFFITTV T W
Sbjct: 136 ANSGEDTNGSQFFITTVTTSW 156
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 127 bits (306), Expect = 8e-30
Identities = 64/124 (51%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Frame = +1
Query: 217 KVTHKVSFDMXIGDDN---IGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVI 387
K+THKV FD+ +G+ G IVIGL+G VP+T NF L +G GYKGS HRVI
Sbjct: 87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146
Query: 388 XNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTV 567
+FMIQ + +YG +DENFKL H G G SMANAG +TNGSQFFI T+
Sbjct: 147 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 206
Query: 568 KTPW 579
KT W
Sbjct: 207 KTSW 210
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 125 bits (301), Expect = 3e-29
Identities = 68/142 (47%), Positives = 83/142 (58%), Gaps = 8/142 (5%)
Frame = +1
Query: 178 IASAKSDEIPKGPK-VTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGE 354
I AK +++ + + VTHKV FD+ I G I+IGLFG VPKT NF L +G
Sbjct: 42 ILDAKLNQVGEDLEGVTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGV 101
Query: 355 G-------YKGSKXHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXS 513
G +KGS HR+I FMIQ IYG++ DENFKLKH G G+ S
Sbjct: 102 GNMGKPLYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLS 161
Query: 514 MANAGXDTNGSQFFITTVKTPW 579
MAN+G D+NGSQFFITTV T W
Sbjct: 162 MANSGPDSNGSQFFITTVTTSW 183
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 111 bits (266), Expect = 6e-25
Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Frame = +1
Query: 124 KLVLIMGTLTMALGILLFIASAKSD-EIPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKT 300
+ +L++ LT+ L LF + ++ + ++T++V D+ I +G IVIGL+G
Sbjct: 12 RCLLLLVALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDIDGQRLGRIVIGLYGTV 71
Query: 301 VPKTTXNFFQLAQKPEGEG-------YKGSKXHRVIXNFMIQXXXXXXXXXXXXRIIYGE 459
VPKT NF L +G+ YKG+ HR+I F+IQ IYG
Sbjct: 72 VPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGG 131
Query: 460 RXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTVKTPW 579
DENFK++H AG +MAN G D+NGSQFFITTVK W
Sbjct: 132 TFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASW 171
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 108 bits (259), Expect = 4e-24
Identities = 61/124 (49%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Frame = +1
Query: 229 KVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------YKGSKXHRVI 387
KV FDM IG G IV+ L+ PKT NF L +G G +KGS HRVI
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 388 XNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTV 567
NFM Q IYG + EDENF+ KH G G SMANAG +TNGSQFFI TV
Sbjct: 66 PNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 125
Query: 568 KTPW 579
KT W
Sbjct: 126 KTDW 129
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 107 bits (257), Expect = 7e-24
Identities = 60/124 (48%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Frame = +1
Query: 229 KVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------YKGSKXHRVI 387
KV FDM I G IV+ L+ P+T NF L +G G +KGSK HRVI
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 388 XNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTV 567
NFM Q IYG + EDENF+ KH G G SMANAG +TNGSQFFI TV
Sbjct: 65 PNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 124
Query: 568 KTPW 579
KT W
Sbjct: 125 KTDW 128
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 106 bits (254), Expect = 2e-23
Identities = 58/124 (46%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Frame = +1
Query: 229 KVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------YKGSKXHRVI 387
KV FD+ IG G +V+ LF P+T NF L G G YKGS HR+I
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64
Query: 388 XNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTV 567
FM Q IYG + EDENFKLKH G G SMAN+G +TNGSQFFI T
Sbjct: 65 PGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTE 124
Query: 568 KTPW 579
KT W
Sbjct: 125 KTSW 128
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 104 bits (249), Expect = 7e-23
Identities = 58/124 (46%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Frame = +1
Query: 229 KVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------YKGSKXHRVI 387
KV FDM +G + G IV+ L+ T P+T NF L G G YKGS HRVI
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65
Query: 388 XNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTV 567
FM Q IYG + +DENF KH G G SMANAG +TNGSQFFI T
Sbjct: 66 PKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTE 125
Query: 568 KTPW 579
KT W
Sbjct: 126 KTSW 129
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 97.9 bits (233), Expect = 6e-21
Identities = 56/123 (45%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Frame = +1
Query: 229 KVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG--------YKGSKXHRV 384
K D+ IG + G IVI L+ VPKT NF L +G G YKG++ HRV
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64
Query: 385 IXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITT 564
I FMIQ IYG + +DENF+LKH G SMAN+G +TNGSQFFITT
Sbjct: 65 IKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITT 124
Query: 565 VKT 573
+T
Sbjct: 125 TRT 127
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 97.5 bits (232), Expect = 7e-21
Identities = 56/124 (45%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Frame = +1
Query: 229 KVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------YKGSKXHRVI 387
+V FDM + IG I + LF T P T NF L +G G +KGS HRVI
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64
Query: 388 XNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQFFITTV 567
FM Q IYG + +DENF KH GAG SMAN+G +TNGSQFFI T
Sbjct: 65 PGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTD 124
Query: 568 KTPW 579
KT W
Sbjct: 125 KTSW 128
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 95.1 bits (226), Expect = 4e-20
Identities = 56/130 (43%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Frame = +1
Query: 205 PKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQ---KPEGE--GYKGS 369
P PK V FD+ IG G I + LF PKT NF Q + G+ GYK
Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKEC 84
Query: 370 KXHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQ 549
+ HRVI +FM+Q IYG + EDENF KH G G SMAN+G +TNG Q
Sbjct: 85 QFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQ 144
Query: 550 FFITTVKTPW 579
FFIT K W
Sbjct: 145 FFITCAKCDW 154
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 93.5 bits (222), Expect = 1e-19
Identities = 56/128 (43%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Frame = +1
Query: 217 KVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG--------YKGSK 372
K V D+ IG D + IVI LF VPKT NF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 373 XHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQF 552
HRVI FM Q IYG + DENF+L H GAG SMAN G +TNGSQF
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 553 FITTVKTP 576
FI + P
Sbjct: 124 FILFKRQP 131
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 93.5 bits (222), Expect = 1e-19
Identities = 56/128 (43%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Frame = +1
Query: 217 KVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG--------YKGSK 372
K V D+ IG D + IVI LF VPKT NF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 373 XHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQF 552
HRVI FM Q IYG + DENF+L H GAG SMAN G +TNGSQF
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 553 FITTVKTP 576
FI + P
Sbjct: 124 FILFKRQP 131
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 73.3 bits (172), Expect = 1e-13
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Frame = +1
Query: 256 DDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQXXXXXXXXXX 435
+ ++G + ++ K P+T NF +L+++ Y HR++ +F++Q
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQGGDPTGTGRG 71
Query: 436 XXRIIYGERXEDE-NFKLKHYGAGWXSMANAGXDTNGSQFFITTVKTP 576
I YG + EDE N +LKH GAG SMANAG +TNGSQFFIT P
Sbjct: 72 GESI-YGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQP 118
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 68.5 bits (160), Expect = 4e-12
Identities = 45/106 (42%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = +1
Query: 265 IGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQXXXXXXXXXXXXR 444
+G I + L+ + PKT NF + Y HRVI FMIQ +
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQTGDPLGDGTGG-Q 539
Query: 445 IIYGERXEDENFK-LKHYGAGWXSMANAGXDTNGSQFFITTVKTPW 579
I+G EDE K L+H SMANAG +TNGSQFFITTV TPW
Sbjct: 540 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPW 585
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 66.5 bits (155), Expect = 2e-11
Identities = 43/106 (40%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 262 NIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQXXXXXXXXXXXX 441
N+G I +F VPK+ NF L Y G+ HR I FMIQ
Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQGGDPKGTGKGGT 64
Query: 442 RIIYGERXEDE-NFKLKHYGAGWXSMANAGXDTNGSQFFITTVKTP 576
I +G++ DE LKH G SMAN+G +TNGSQFFIT K P
Sbjct: 65 SI-WGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQP 109
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 62.5 bits (145), Expect = 3e-10
Identities = 46/121 (38%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +1
Query: 199 EIPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXH 378
++ K PK V F GD NI L P+ NF L ++ Y G H
Sbjct: 335 KVEKNPKKKGYVQFQTTHGDLNIE-----LHCDIAPRACENFITLCERGY---YNGVAFH 386
Query: 379 RVIXNFMIQXXXXXXXXXXXXRIIYGERXEDE-NFKLKHYGAGWXSMANAGXDTNGSQFF 555
R I NFMIQ I +G+ +DE N KL H G G SMAN+G TNGSQFF
Sbjct: 387 RSIRNFMIQGGDPTGTGKGGESI-WGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFF 445
Query: 556 I 558
+
Sbjct: 446 V 446
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/123 (33%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Frame = +1
Query: 217 KVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG--------YKGSK 372
K +V D+ I D T+V LF + PKT+ NF L +G G YKGS
Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSF 63
Query: 373 XHRVIXNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHYGAGWXSMANAGXDTNGSQF 552
HR++ Q IY + DE+ KL+H G SM+ A D GS F
Sbjct: 64 FHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHF 123
Query: 553 FIT 561
IT
Sbjct: 124 HIT 126
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 268 GTIVIGLFGKTVPKTTXNFFQLAQKPEGEGY-KGSKXHRVIXNFMIQXXXXXXXXXXXXR 444
G I + L+ K PK+ NF QL EGY + HRVI F++Q
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGDS 77
Query: 445 IIYGERXEDENFKLKHYGAGWXSMANAGX-DTNGSQFFITTVKTPW 579
I G ++ + +L+ G +MANA ++NGSQFF T K W
Sbjct: 78 IYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDW 123
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/118 (34%), Positives = 50/118 (42%), Gaps = 8/118 (6%)
Frame = +1
Query: 229 KVSFDMXIGDDNIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEG-------YKGSKXHRVI 387
KV FD+ + G IVI LF P+T NF L G G YKGS ++
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64
Query: 388 XNFMIQXXXXXXXXXXXXRIIYGERXEDENFKLKHY-GAGWXSMANAGXDTNGSQFFI 558
+ M I+ E +DE F L H G G SMA D+NGSQF I
Sbjct: 65 PDLM----WCGGDIIFENEPIHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQI 114
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 41.9 bits (94), Expect = 4e-04
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Frame = +1
Query: 262 NIGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQXXXXXXXXXXXX 441
++G IVI L P T NF +L + + Y G H V +F Q
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQTGDPTGTGAGGD 64
Query: 442 RI---IYGERX---EDE-NFKLKHYGAGWXSMANAGXDTNGSQFFIT 561
I +YGE+ +DE + LKH G +MA+ G + N SQF+ T
Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFT 111
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 37.1 bits (82), Expect = 0.011
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Frame = +1
Query: 118 RTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTH--------KVSFDMXIGDDNIGT 273
++ L+L++ T T L LL + A++D I P +T+ K D+ I + IG
Sbjct: 50 KSSLLLLLTTQT-TLTPLLDFSKAQADTIAN-PNLTNCENRIPTKKAFIDVSIDGEPIGR 107
Query: 274 IVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFM 399
I+IGL+G VP T F + G Y+ +++ ++
Sbjct: 108 IIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 268 GTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQ 405
G I + LF + P+ F L QK + +KG RVI N+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 268 GTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQ 405
G I + LF + P+ F L QK + +KG RVI N+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 268 GTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRVIXNFMIQ 405
G I + LF + P+ F L QK + +KG RVI N+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 265 IGTIVIGLFGKTVPKTTXNFFQLAQKPEGEGYKGSKXHRV 384
+G +V+GL+G+ VP T F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKI 123
>At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 680
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 136 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTT 315
++ + L +LLFIA + K K T + +GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 316 XNFFQ---LAQKPEGEGYKGS 369
+F + + + GE YKG+
Sbjct: 349 NDFAESNKIGRGGFGEVYKGT 369
>At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 674
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 136 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMXIGDDNIGTIVIGLFGKTVPKTT 315
++ + L +LLFIA + K K T + +GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 316 XNFFQ---LAQKPEGEGYKGS 369
+F + + + GE YKG+
Sbjct: 349 NDFAESNKIGRGGFGEVYKGT 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,541,929
Number of Sequences: 28952
Number of extensions: 217866
Number of successful extensions: 417
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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