Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0581
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.65 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.85 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.0  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 392 YRPGCAAIESVSSFLDG 342
           Y PGCA ++S S+ L G
Sbjct: 382 YLPGCAMVDSCSNILTG 398


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
 Frame = -3

Query: 370 LKVSRAFWTASAADIV--FC--LDVVRFPTVILNFEIPCLIFIVATP 242
           LK + A   A+AA+ V  FC  LD     ++I+N  +PC+  +VA P
Sbjct: 293 LKDTEAEVRAAAANKVKDFCQNLDKAHQESIIMNNILPCVKELVADP 339


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 492 FCFVSDPCVGPPP*RFGFP 436
           FC   DP   PPP   G P
Sbjct: 127 FCHNGDPLSQPPPAHMGIP 145


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 492 FCFVSDPCVGPPP*RFGFP 436
           FC   DP   PPP   G P
Sbjct: 19  FCHNGDPLSQPPPAHMGIP 37


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 266 FNIYCCHTLRN*KVFSKK 213
           +NIY C T+ N + F +K
Sbjct: 195 YNIYVCQTVSNFEYFQRK 212


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 266 FNIYCCHTLRN*KVFSKK 213
           +NIY C T+ N + F +K
Sbjct: 121 YNIYVCQTVSNFEYFQRK 138


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 344 GLSS*HRLLFGCCKIPDCHLEF 279
           G+++ H   FG    PDC +EF
Sbjct: 346 GMAAPHHQNFGPRHPPDCSMEF 367


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +2

Query: 194 VHIESYFFWKKLFNFLRCGNN 256
           +H+ +   ++   +F RCGN+
Sbjct: 685 IHVGTQLIYRPFSHFPRCGNH 705


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,482
Number of Sequences: 336
Number of extensions: 3556
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)