Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0581
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    28   0.27 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    28   0.27 
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    26   1.4  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +2

Query: 350 KSSRHFQSRHNQADRMAPSAAQESVKNV*GKPKRHGGGPTQGSE 481
           + S+H Q +H       P  AQ + +    KP  H GG T G +
Sbjct: 477 QQSQH-QQQHQHQPGGGPLPAQSAKQRTKSKPAEHAGGSTTGDK 519


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +2

Query: 350 KSSRHFQSRHNQADRMAPSAAQESVKNV*GKPKRHGGGPTQGSE 481
           + S+H Q +H       P  AQ + +    KP  H GG T G +
Sbjct: 477 QQSQH-QQQHQHQPGGGPLPAQSAKQRTKSKPAEHAGGSTTGDK 519


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = -3

Query: 526 SSSRLRGRMASILLR----LRSLCRASTMTFWFSSYILNRFLSC*RRHSIGLVVPRLKVS 359
           S+ R  G+M S LL+    L +  R+  M  W +  +LN  +S     ++G+ +  + V 
Sbjct: 243 SAIRNVGQMHSGLLKCIRLLNTSIRSMLMLQWLTC-VLNWSISLIYLTNVGISLQSVTVV 301

Query: 358 RAFWTASAADIVFCLDVVRFPT 293
             F+ A+A   ++CL   R  T
Sbjct: 302 VMFFLATAETFLYCLLGTRLAT 323


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,378
Number of Sequences: 2352
Number of extensions: 15944
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)