Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0581
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              26   0.33 
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    26   0.33 
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    23   3.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   5.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.3  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +1

Query: 88  FLH*IKIILRISIYSNKSVSEV 153
           F+H I +IL I IYSN+++++V
Sbjct: 9   FIHSIFLILIIFIYSNETIAQV 30


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +1

Query: 88  FLH*IKIILRISIYSNKSVSEV 153
           F+H I +IL I IYSN+++++V
Sbjct: 9   FIHSIFLILIIFIYSNETIAQV 30


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 359 RHFQSRHNQADRM 397
           RHFQ +H Q+D +
Sbjct: 23  RHFQDKHEQSDTL 35


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 344 RPKSSRHFQSRHNQADRMAPSAAQESVKNV*GKPK 448
           RPK  +    +  Q D  AP+A +  V+ V  KP+
Sbjct: 365 RPKLRKDMYEKMVQVDPTAPNAEERRVQGV-TKPR 398


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 344 RPKSSRHFQSRHNQADRMAPSAAQESVKNV*GKPK 448
           RPK  +    +  Q D  AP+A +  V+ V  KP+
Sbjct: 280 RPKLRKDMYEKMVQVDPTAPNAEERRVQGV-TKPR 313


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 344 RPKSSRHFQSRHNQADRMAPSAAQESVKNV*GKPK 448
           RPK  +    +  Q D  AP+A +  V+ V  KP+
Sbjct: 599 RPKLRKDMYEKMVQVDPTAPNAEERRVQGV-TKPR 632


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 371 SRHNQADRMAPSAAQESVKNV*GKPKRH 454
           +RH +AD    S + E+  N    P+ H
Sbjct: 242 TRHREADDAEESVSSETNHNERSTPRSH 269


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 371 SRHNQADRMAPSAAQESVKNV*GKPKRH 454
           +RH +AD    S + E+  N    P+ H
Sbjct: 242 TRHREADDAEESVSSETNHNERSTPRSH 269


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 371 SRHNQADRMAPSAAQESVKNV*GKPKRH 454
           +RH +AD    S + E+  N    P+ H
Sbjct: 242 TRHREADDAEESVSSETNHNERSTPRSH 269


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,363
Number of Sequences: 438
Number of extensions: 4163
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)