Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0575
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 39 0.005
03_02_0484 + 8805053-8805538 39 0.005
03_02_0483 - 8804021-8804485 39 0.005
02_02_0077 - 6586638-6587165 38 0.011
03_02_0478 + 8775892-8776377 37 0.015
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.046
01_01_0229 - 1943473-1943922 35 0.061
04_04_0017 + 22176759-22177406 35 0.081
01_01_0231 + 1951047-1951499 35 0.081
11_02_0041 - 7669692-7670312 34 0.11
12_01_0061 + 514798-515967 34 0.14
02_05_0494 + 29486960-29487454 33 0.19
01_01_0227 + 1933247-1933699 33 0.33
01_01_0599 - 4448290-4448790 32 0.57
02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558... 30 1.7
05_03_0029 - 7525408-7525634,7526253-7526457 30 2.3
12_02_0643 - 21461123-21461902 29 3.0
05_03_0619 + 16274255-16274396,16274775-16274848,16275111-162761... 29 3.0
03_05_0865 - 28365430-28367640 29 3.0
01_05_0523 - 22915390-22915901,22916496-22916619,22916708-229168... 29 4.0
01_01_0228 + 1940149-1940649 29 4.0
10_01_0204 + 2199778-2200835,2201212-2201311 29 5.3
07_03_0725 + 20991640-20992471,20993308-20993418,20993542-209937... 28 7.0
03_02_0467 + 8707777-8707892,8708030-8708096,8708190-8708260,870... 28 7.0
02_05_0276 + 27378994-27380094,27380185-27380250,27380586-273806... 28 7.0
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 28 7.0
12_02_0759 - 22882435-22882731 28 9.3
01_01_0277 + 2274383-2274465,2274889-2274955,2275040-2275110,227... 28 9.3
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 388 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 501
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 111 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 388 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 501
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 113 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 388 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 501
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 106 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 142
>02_02_0077 - 6586638-6587165
Length = 175
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 394 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAXKGERKVPIAQTG 546
+F+RR+ LPE A + V + DGVLT+T +K P K R V + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>03_02_0478 + 8775892-8776377
Length = 161
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +1
Query: 388 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 495
S +F+RR+ LP+ A PE +++ + +GVLT+T P++
Sbjct: 113 SGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKE 147
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.046
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 388 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 492
S QF+RR+ LPE A + V++ L +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.061
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 388 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 492
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 101 SGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPK 134
>04_04_0017 + 22176759-22177406
Length = 215
Score = 34.7 bits (76), Expect = 0.081
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 394 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAXKGERKVPIAQTG 546
+F R+ LP+ A +++ + L + GVLT+ + PD KG R V IA G
Sbjct: 141 RFWRQLRLPDNADLDSIAASLDN-GVLTVRFRKLAPDQIKGPRVVGIASAG 190
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.7 bits (76), Expect = 0.081
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 388 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 492
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPK 135
>11_02_0041 - 7669692-7670312
Length = 206
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1
Query: 394 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAXKGERKV 528
+F RR+ +P GA V +RL DGVLT+T P KVP E +V
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP-KVPGHRGREPRV 183
>12_01_0061 + 514798-515967
Length = 389
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = -1
Query: 590 SWVPSLWSLISLRTGPVCAMGTFLSPLXASGTFLGAVMVRTPSDDSRDSTV 438
SW PS +LISL +G CA F S + A+ FL SDD D TV
Sbjct: 295 SWSPSKLNLISLGSGRFCAAKIFRSNMPAAAAFL------DDSDDDDDYTV 339
>02_05_0494 + 29486960-29487454
Length = 164
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 391 RQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 495
R V ++ LPE AA + +R++ DGVLT+T P++
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVPKR 139
>01_01_0227 + 1933247-1933699
Length = 150
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 388 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 495
S +F RR+ LP GA + V + + +GVLT+T P++
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>01_01_0599 - 4448290-4448790
Length = 166
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 394 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAXKGERKVPI 534
+F+R++ LP+ A + + S + DGVLT+T + P K + + +
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163
>02_05_0308 -
27754340-27754634,27755591-27755696,27755781-27755855,
27756039-27757410
Length = 615
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -1
Query: 323 VFTEISSGEKCCTSRLTWNLSLSAFMLEPRSRD 225
+F ++S GE+C ++ T+N+ +SA + R+ D
Sbjct: 401 LFEKMSKGEECLPNQDTYNIIISAMFMRKRAED 433
>05_03_0029 - 7525408-7525634,7526253-7526457
Length = 143
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = -3
Query: 330 VGSLHRNLFRREVLHVQIDLELVLVGL---YAGAEVTRCSRELSPRSEVVFGEHWTGDGS 160
V S R R + +IDL+L G Y EV R RE R FG GDG+
Sbjct: 11 VDSRERKKLRNQSKPPRIDLQLRSHGQARSYVRHEVARRKRERR-RDGYTFGSDSNGDGA 69
Query: 159 QHVVRG*RQSEILINKTTGPVVVTNAG 79
VR R + +L+ G +TN+G
Sbjct: 70 NGSVRVERWAPVLVPAMRG---MTNSG 93
>12_02_0643 - 21461123-21461902
Length = 259
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 473 SPSPRRGRYPTPXRERERCPSHRPVPF 553
SPSP RGR TP R R P+ P P+
Sbjct: 211 SPSPLRGRPRTPPPPRPRPPTTPPRPY 237
>05_03_0619 +
16274255-16274396,16274775-16274848,16275111-16276139,
16276484-16276702,16277228-16277250,16277482-16277606,
16279480-16279670,16280202-16280360,16281359-16281598
Length = 733
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -2
Query: 445 PQSQAPRLQAARNVXRTA-LKYTRARLSSLRACLPP--RCTRRQSSPKSLPARSAARPD* 275
P+ Q P + R ++ RA + + C+ P R R L A +A+
Sbjct: 598 PRKQMPEFETTRYFNLAGFVEQLRALAAEVGYCITPEYRVVRNFEDKGVLEALWSAKSSP 657
Query: 274 LGTCPCRPL 248
GTCP RPL
Sbjct: 658 YGTCPSRPL 666
>03_05_0865 - 28365430-28367640
Length = 736
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 492 EGTRRRQGREKGAHRTDRSRSQGD*GPERGN 584
+ +RR + RE+G DR R +GD ERG+
Sbjct: 114 DSSRRDRDRERGDRDRDRDRERGDRDRERGD 144
>01_05_0523 -
22915390-22915901,22916496-22916619,22916708-22916844,
22917383-22917518,22917614-22917951,22919426-22919663
Length = 494
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 483 RAEEGTRRRQGREKGAHRTDRSRSQGD*GPERG 581
R EEG RRR+G+ KGA + + D P G
Sbjct: 8 REEEGRRRRKGKGKGAGEMVLQQEEEDAAPAMG 40
>01_01_0228 + 1940149-1940649
Length = 166
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 397 FVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAXKGER 522
+V R LP G E V + VL IT R V KG+R
Sbjct: 52 YVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQR 93
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 445 ESRLSSDGVLTITAPRKVPDAXKGERKVPIAQTGPVRKEIKDQSEGTQDAENK*GGVLQW 624
++ S G L + ++ +G ++ P+ G RKE + G AE GG +W
Sbjct: 14 QTTTSPPGALEVETRKRPSRTSRGSQREPVGGAG--RKEKAKSAVGAARAERWGGGAERW 71
Query: 625 G 627
G
Sbjct: 72 G 72
>07_03_0725 +
20991640-20992471,20993308-20993418,20993542-20993739,
20993860-20993891,20993943-20994153,20994806-20995043,
20995507-20995657,20996171-20996533
Length = 711
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 118 DQDFGLALTPNDMLAAVACPVLSEDYFRPWRQLAAASRD 234
D+ FGLAL DM A AC F+ R L RD
Sbjct: 75 DRVFGLALCRGDMRDAAACAGCVSGAFQRLRALCGRDRD 113
>03_02_0467 +
8707777-8707892,8708030-8708096,8708190-8708260,
8708629-8708746,8708820-8708893,8709278-8709333,
8709448-8709531,8709611-8709698,8709786-8709863,
8710335-8710391,8710606-8711044
Length = 415
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 404 DVTRCLKARRLRLWNRGCHQTGFSPSPRR 490
+ + + A R+RLWN+G F P R+
Sbjct: 189 ETAKVVSANRVRLWNKGVDSESFHPKFRK 217
>02_05_0276 +
27378994-27380094,27380185-27380250,27380586-27380660,
27381927-27382025,27382353-27382436,27382519-27382868,
27383190-27383406,27383579-27383658,27383760-27383850,
27386544-27386672,27388771-27388858,27389967-27390097
Length = 836
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 346 PPRCTRRQSSPKSLPARSAARP 281
P R TRR++SP S PA AA P
Sbjct: 94 PARSTRRKTSPGSSPASVAAAP 115
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 462 RRGSHHHRAEEGTRRRQGREKGAHRTDRSRSQ 557
R+GS+H + E +++R K A DRS ++
Sbjct: 448 RKGSNHGKGESKSKKRSSTSKDASSPDRSSAE 479
>12_02_0759 - 22882435-22882731
Length = 98
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +3
Query: 462 RRGSHHHRAEEGTRRRQGREKGAHRTDRSRSQGD*GPERGNPGCRK*VGG 611
R HH E G RRR R G DR GP+ G R+ GG
Sbjct: 41 RTHERHHLVERGQRRRGDRGAGVLGADRVEE----GPQHGGGERRRGRGG 86
>01_01_0277 +
2274383-2274465,2274889-2274955,2275040-2275110,
2275550-2275667,2275755-2275828,2276094-2276149,
2276237-2276320,2276422-2276509,2276602-2276679,
2276814-2276870,2277074-2277578
Length = 426
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 404 DVTRCLKARRLRLWNRGCHQTGFSPSPR 487
+ + A R+RLWN+G F P R
Sbjct: 178 ETAHVISANRIRLWNKGVDSASFHPKFR 205
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,050,483
Number of Sequences: 37544
Number of extensions: 409191
Number of successful extensions: 1635
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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