Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0574
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0669 - 20542481-20542489,20543212-20543872,20543899-205439... 34 0.12
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677... 31 0.67
02_04_0443 - 22969690-22969700,22970561-22970642,22971484-229716... 31 0.88
12_02_0904 - 24181766-24181809,24181888-24182066,24182424-241824... 31 1.2
09_06_0352 + 22472369-22472731,22472829-22472941,22473420-224742... 30 2.0
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 30 2.0
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 30 2.0
01_05_0129 + 18431820-18432224 30 2.0
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 29 2.7
08_02_0021 + 11307795-11308093,11308454-11308556,11309623-113099... 29 3.5
07_01_0262 + 1957973-1958220,1958272-1958935 29 3.5
06_02_0201 - 12960493-12960606,12960727-12960853,12961100-129612... 29 3.5
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368... 29 3.5
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 29 3.5
02_01_0085 + 610872-611297 29 3.5
01_01_0601 - 4476261-4476728 29 3.5
11_06_0692 + 26327487-26328509 29 4.7
08_01_0827 + 8016704-8017150 29 4.7
05_07_0219 - 28474661-28475146,28475979-28476644 29 4.7
05_03_0474 + 14481063-14481403,14481597-14481710,14483428-144836... 29 4.7
03_02_1033 + 13550955-13551700,13552837-13553290,13553451-135536... 29 4.7
03_02_1031 + 13541327-13542072,13543209-13543662,13543823-135440... 29 4.7
03_02_1001 + 13120072-13120332 29 4.7
01_01_0957 + 7516314-7517489 29 4.7
06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315 28 6.2
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 28 6.2
04_04_0584 + 26381220-26381232,26381583-26381594,26381921-263820... 28 6.2
04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202 28 6.2
01_06_0409 + 29142409-29142870 28 6.2
12_02_1215 + 27070164-27070302,27070308-27071098 28 8.2
12_02_0506 - 19794383-19794670,19795066-19795140,19795337-197987... 28 8.2
10_08_0350 + 17066058-17066235,17067084-17067223 28 8.2
07_01_1186 + 11266210-11266517,11266608-11266656 28 8.2
04_03_0314 - 14238620-14240128 28 8.2
02_02_0327 - 8983983-8985878 28 8.2
01_01_0606 - 4503620-4504060 28 8.2
>07_03_0669 -
20542481-20542489,20543212-20543872,20543899-20543983,
20545311-20546625
Length = 689
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 396 AGSASKLSCPRSCSAKNWNGSSTSRCTRAATLRSCRGSR 512
AG + + SC RSC++ +ST RCT+A +R C+G++
Sbjct: 575 AGRSWRASCCRSCTS-----TSTLRCTQAMAIRRCQGAQ 608
>02_05_0003 -
24867053-24867145,24867264-24867437,24867673-24867735,
24868108-24868198,24869579-24869673,24870471-24870668,
24871475-24871648,24872335-24872439,24872645-24872737,
24873688-24873690,24874776-24874844,24875208-24875265,
24875810-24875918,24876603-24876714,24877992-24878204,
24878214-24878546
Length = 660
Score = 31.5 bits (68), Expect = 0.67
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -3
Query: 392 PFRGHRRRCRPDAASSAR-LPPRWTGVRCRSGSSLSPSQPFRQ-LESIDLSSKTWVSNP 222
P R H R C P AAS+ + PP R RS SS S S R+ + +I L ++NP
Sbjct: 30 PLRPHVRCCSPAAASTTKPPPPPPQDRRRRSASSSSSSTSDRESIRAIRLKKVLLLANP 88
>02_04_0443 -
22969690-22969700,22970561-22970642,22971484-22971601,
22973513-22973740,22973948-22974231
Length = 240
Score = 31.1 bits (67), Expect = 0.88
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Frame = +3
Query: 258 RLELSEWLRRT-----QRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSC 422
RL L E RT QRR A DP PP A + P S P A+ + C
Sbjct: 12 RLSLREGAARTVGKAAQRRDVVAADPAPPPMDL-ALPRLDPASPPPDQGHGHTGAALVRC 70
Query: 423 PRSCSAKNWNGSSTSRCTRAATL-RSCRG--SRRWSAGDCTPEASGYG 557
R + W G++++ RA + RG + RW A T +SG G
Sbjct: 71 RR---RRRWRGAASAAKARATVIVVEARGWMAARWLA--VTAVSSGCG 113
>12_02_0904 -
24181766-24181809,24181888-24182066,24182424-24182464,
24182829-24182860,24183816-24184140
Length = 206
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = +1
Query: 301 PERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEARRSSHVLEAVPRR 444
P HR+P RG A AA+G RC R TP R L V RR
Sbjct: 50 PPLHRSPRRRGQGAAGVAAAGPRGGRCSRRRTP---RRGGALHGVRRR 94
>09_06_0352 +
22472369-22472731,22472829-22472941,22473420-22474226,
22474314-22474620,22474862-22475027,22475491-22475534,
22476019-22476161,22477900-22477937,22478032-22478129,
22478130-22478220,22478514-22478693,22479311-22479495,
22479583-22479678,22480151-22480297,22480763-22480864,
22480932-22481564
Length = 1170
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +2
Query: 359 PADID----ADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPL 496
PAD D ++RE+ R+ V L+ S FRE L+R++ + G APL
Sbjct: 411 PADDDNVYSTELRELLSRRSVSNLLHSA-FRENLDRLIRSYVERQGRAPL 459
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 125 NLCVNFVCSDHLICRYA 175
NLC +C +H +CRYA
Sbjct: 467 NLCWKLICMEHAVCRYA 483
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 308 GTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELER 454
G G E E+E +QR + + R+ E RKR E + REE ER
Sbjct: 475 GGGKGEKEREEEERRQREKEEEERRRQEEERKRREEEEKERREREEEER 523
>01_05_0129 + 18431820-18432224
Length = 134
Score = 29.9 bits (64), Expect = 2.0
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +3
Query: 282 RRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSAS-KLSCPRSCSAKNWNGS 458
RR QR S ++P P PP P + + A A +A K++C RS +AK+
Sbjct: 4 RRRQRPS-SSP-PLPPEHS--------PLPSVIVATARARTADPKIACDRSAAAKSPASG 53
Query: 459 STSRCTRAATLRSCRGSRRWSAGDCTPEASGYGCV 563
ST+ A LR C P A+G C+
Sbjct: 54 STAAALPTAKLRRCSPPHHRIRRHRVPTATGPRCL 88
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 328 RGGRRALEAASGRHRRRCP-RNGTPEARRSSHVLEAV 435
R GRRA AA HRRR P R+ PEA V++ V
Sbjct: 4 REGRRA-AAARAVHRRRLPARSDAPEANPRGQVIQCV 39
>08_02_0021 +
11307795-11308093,11308454-11308556,11309623-11309931,
11310190-11310618
Length = 379
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +3
Query: 285 RTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSC---PRSCSAKNWNG 455
R ++R P P P RR+ V TP SA A S +L C PR CS+ G
Sbjct: 149 RGRQRRLGPPPPLPARRRLGPPPPVLVPHTPASAA--AASHPRLRCRCEPRGCSSGRIEG 206
Query: 456 SSTS 467
+ +
Sbjct: 207 AGAA 210
>07_01_0262 + 1957973-1958220,1958272-1958935
Length = 303
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 276 WLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 413
WLR+ S CP RR+ S ++ S P S AG A +
Sbjct: 85 WLRQASSSSAPVAVGCPTRRRPSPAAAAEKCSLPASPPTTAGVARR 130
>06_02_0201 -
12960493-12960606,12960727-12960853,12961100-12961276,
12961864-12961975,12964141-12964144
Length = 177
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 400 PAFHFADIGVDVGRTLLQALVFLLGGQGSGAVRDRL*VRLSHSD 269
P HF D D+GRTL Q +V +L + ++L R+ H +
Sbjct: 102 PTVHFVDEHYDIGRTLAQRVVSMLAND----ILEQLATRVLHEE 141
>05_07_0310 +
29135875-29136052,29136206-29136617,29136723-29136867,
29137944-29138102,29138183-29138242,29138349-29138546
Length = 383
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/66 (21%), Positives = 32/66 (48%)
Frame = +2
Query: 272 GMAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 451
G+A+ +E + P + E+E + +++D D E + + ++ EE E
Sbjct: 194 GLAQEVAEAVNTEEAPATAEDEKKPEDVPQSEVDKDKESPENEEEEKEPEDKEMTLEEYE 253
Query: 452 RVLDQQ 469
+VL+++
Sbjct: 254 KVLEEK 259
>03_03_0246 +
15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 329 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELER--VLDQQMHEGGDAPLLQ 502
EEE +RL + A A + E ER + + ++ REE +R ++++ + G LQ
Sbjct: 512 EEERQRLVEEEARHAAWLAEQERLEAAKRAEEQRIAREEEKRKAAIEEERRKEGARKKLQ 571
Query: 503 RIKEMVGGRLHTGSLR 550
++ + R ++R
Sbjct: 572 ELEARIARRQAESNIR 587
>02_01_0085 + 610872-611297
Length = 141
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
Frame = +3
Query: 282 RRTQRRSRTAPDP---CPPRRKTS 344
RR RSR APDP CPP R+ S
Sbjct: 82 RRRSARSRAAPDPPTSCPPSRQIS 105
>01_01_0601 - 4476261-4476728
Length = 155
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1
Query: 325 HRGGRRALEAASGRHRRRCPRNGTPEARRSS 417
HRG RRA+ GRHR R R EA R +
Sbjct: 44 HRGRRRAVTGDGGRHRER--RRAAREAARGN 72
>11_06_0692 + 26327487-26328509
Length = 340
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 306 TAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSAS 410
TAP P PP+R S S P SA+ G+A+
Sbjct: 237 TAPPPPPPKRSPSPSPSPSPAPAAASARGGRGAAT 271
>08_01_0827 + 8016704-8017150
Length = 148
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 312 PDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTSRCTRAATL 491
P P PPRR+ + T PM+ +GSA+ C RSCS + ++ S A T
Sbjct: 14 PSPPPPRRQEVGAAVRLTTRFPMTTA-PSGSATSALC-RSCS----SAAAPSPWPCAPTT 67
Query: 492 RSC-RGSRRWSAG 527
C R S W G
Sbjct: 68 PPCGRASTAWKNG 80
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +3
Query: 249 QINRLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPR 428
Q+ + ++ W R TAP P PP SA + P +P ++ +A+ + P
Sbjct: 53 QLEKTRMTTWARSVVESFDTAPPPSPP--PLSATTPHPPPPSPATSSSRTATATATATPT 110
Query: 429 S 431
S
Sbjct: 111 S 111
>05_03_0474 +
14481063-14481403,14481597-14481710,14483428-14483676,
14485844-14486225
Length = 361
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 300 SRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRS 431
S ++P P P R+T+ +VRP S P + A S +L+ P S
Sbjct: 16 SSSSPPPPSPGRRTATAFAVRPRSLP-DPPFQAPSRDRLTLPAS 58
>03_02_1033 +
13550955-13551700,13552837-13553290,13553451-13553648,
13553726-13553807,13554496-13554590
Length = 524
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 383 REMERRKRVEALMSSKLFREELERVLDQQMHEGGDA 490
REMERR R+ ALM L+R+L Q E G A
Sbjct: 118 REMERRDRLRALMVRLEADGHLDRLLRAQEEEQGAA 153
>03_02_1031 +
13541327-13542072,13543209-13543662,13543823-13544020,
13544098-13544179,13544868-13544962
Length = 524
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 383 REMERRKRVEALMSSKLFREELERVLDQQMHEGGDA 490
REMERR R+ ALM L+R+L Q E G A
Sbjct: 118 REMERRDRLRALMVRLEADGHLDRLLRAQEEEQGAA 153
>03_02_1001 + 13120072-13120332
Length = 86
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 408 SKLSCPRSCSAKNWNGSSTSRCTRAATLRSCRGS 509
S+ C R+ SA+ NG + RC + + S RG+
Sbjct: 5 SRARCSRTSSARKLNGLFSRRCNSSGEVTSSRGA 38
>01_01_0957 + 7516314-7517489
Length = 391
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 289 LRDDPERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEAR 408
++D+P R ++G AA+ R RRR P G PE R
Sbjct: 180 VKDNPFLMRDRENKGNDGGAAAAAARWRRRDPFEGYPERR 219
>06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315
Length = 678
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 306 TAPDPCPPRRKTSA*SSVRPTST-PMSAKWNAGSASKLSCPRSCSAKNWNGSSTS 467
++P P P +A S PTS P ++ W SA+ S +AK + +S+S
Sbjct: 622 SSPSPAPSPDSATASRSASPTSARPATSSWTCTSAATASA-SPATAKRTSSTSSS 675
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 279 LRRTQRRS-RTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPR--SCSAKNW 449
+RR+ RR R + PRR S ++ + + MS W A A+ S PR + SA++W
Sbjct: 237 IRRSYRRGRRLSCSSFSPRRSLSP-RALSSSPSAMSQMWRAAVAAVGSSPRASAASARSW 295
>04_04_0584 +
26381220-26381232,26381583-26381594,26381921-26382028,
26382137-26382217,26382320-26382465,26382550-26382624,
26382709-26382756,26382845-26382994,26383081-26383140,
26383394-26384274,26384674-26385670,26385887-26385895
Length = 859
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -1
Query: 511 LDPLQER--SVAALVHLLVEDPFQFFAEQLRGHESFDAL---PAF 392
LDP QE S L+H ++ P +Q G ESF +L PAF
Sbjct: 116 LDPRQEGQLSYTNLIHQIIHSPTVTIQQQTGGQESFTSLLRTPAF 160
>04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202
Length = 234
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/88 (26%), Positives = 34/88 (38%)
Frame = +3
Query: 294 RRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTSRC 473
R ++T P P PP +++ R + P K +G AS+ ++ G R
Sbjct: 90 REAKTLPPPLPPSSSSASPPPERSPAKPHGRKEGSGGASRQPA-QAARGVTQGGGGGRRH 148
Query: 474 TRAATLRSCRGSRRWSAGDCTPEASGYG 557
AA RS G GD + G G
Sbjct: 149 ICAALARS--GGVSAGGGDGVSNSGGDG 174
>01_06_0409 + 29142409-29142870
Length = 153
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 423 PRSCS-AKNWNGSSTSRCTRAATLRSCRGSRRWSAGDCTPEASG 551
PRS + W + R A T + GSRRWS D SG
Sbjct: 14 PRSAPLGRIWRVEAVGRRQLATTTTTAGGSRRWSRPDLDAGGSG 57
>12_02_1215 + 27070164-27070302,27070308-27071098
Length = 309
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 307 RHRTPVHRGGRRALEAASGRHRRRC 381
R P GGRR L AA R RRRC
Sbjct: 67 RASRPDLEGGRRQLAAAVRRRRRRC 91
>12_02_0506 -
19794383-19794670,19795066-19795140,19795337-19798704,
19799503-19799671,19799758-19799850
Length = 1330
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3
Query: 386 RGHRRRCRPDAASSARLPPR 327
R RRR RP AAS A PPR
Sbjct: 55 RAQRRRTRPAAASVALAPPR 74
>10_08_0350 + 17066058-17066235,17067084-17067223
Length = 105
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 285 RTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSAS 410
RT RR R P PP+ + S S R ++P+S N G A+
Sbjct: 18 RTARR-RIFPQMQPPKARASRASDQRRVASPLSKSENDGDAA 58
>07_01_1186 + 11266210-11266517,11266608-11266656
Length = 118
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 341 ERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 451
ERL+ R ++M+R+++ +AL S K F E LE
Sbjct: 73 ERLRARHRQGGQQSKKMDRKRKGKALASQKRFEEFLE 109
>04_03_0314 - 14238620-14240128
Length = 502
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 434 TASRT*ELRRASGVPFRGHRRRCR-PDAASSARLPPRWTGVRCRSGSSLSPS 282
TAS + L S P H RR R P+ S PP T VRC + +PS
Sbjct: 4 TASSSSSLSFLSPQPI--HPRRVRLPNPPPSTAAPPTPTAVRCTPAPAAAPS 53
>02_02_0327 - 8983983-8985878
Length = 631
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = +3
Query: 408 SKLSCPRSCSAKNWNGSSTSRCTRAATLRSCRGSRRWSAGDCTPEASGYGC 560
S ++C S SST CT ++ RG S+G C G C
Sbjct: 223 SPVACTSGLSRPQQRSSSTKNCTYPGCMKGARG----SSGRCIAHGGGRRC 269
>01_01_0606 - 4503620-4504060
Length = 146
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 306 TAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSAS---KLSCPRSCSAKNWNGSSTSRCT 476
T P P P R++T+A S + T P + +AS P S + + +++ R T
Sbjct: 54 TTPTPTPARKRTAAASPLGATPAPAPERKGMSAASLPGATPTPTSATERKGTTAASPRGT 113
Query: 477 RAAT 488
++ T
Sbjct: 114 QSTT 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,155,525
Number of Sequences: 37544
Number of extensions: 383080
Number of successful extensions: 2042
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2040
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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