Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0574
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12) 43 2e-04
SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27) 42 6e-04
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_8580| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_2182| Best HMM Match : EGF_CA (HMM E-Value=0) 32 0.51
SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018) 32 0.51
SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0) 32 0.51
SB_33722| Best HMM Match : EGF_CA (HMM E-Value=0) 31 0.90
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_31615| Best HMM Match : GCC2_GCC3 (HMM E-Value=0.053) 31 1.2
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 31 1.2
SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14) 30 1.6
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 30 2.1
SB_38884| Best HMM Match : SpoA (HMM E-Value=1.5) 30 2.1
SB_31862| Best HMM Match : E7 (HMM E-Value=4.4) 30 2.1
SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24) 29 2.7
SB_48850| Best HMM Match : EGF_CA (HMM E-Value=2.1e-27) 29 2.7
SB_46539| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 29 3.6
SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_31603| Best HMM Match : DUF1279 (HMM E-Value=0.51) 29 3.6
SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_6350| Best HMM Match : Acyl_transf_1 (HMM E-Value=0.87) 29 4.8
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_46351| Best HMM Match : EGF_CA (HMM E-Value=2.3e-14) 29 4.8
SB_45968| Best HMM Match : DUF1279 (HMM E-Value=1.2) 28 6.3
SB_40000| Best HMM Match : Pox_A32 (HMM E-Value=0.053) 28 6.3
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 6.3
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 28 8.4
SB_29813| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 8.4
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 28 8.4
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22) 28 8.4
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 28 8.4
SB_16535| Best HMM Match : ShTK (HMM E-Value=2.2e-18) 28 8.4
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12)
Length = 716
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +2
Query: 326 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPLLQR 505
TE+ +R P I+ DVR ++ R+RV ++ ++FREELE ++ GD +L+R
Sbjct: 222 TEKGFDRAISTPDQINRDVRGLKLRQRVSIVLGDEVFREELEEIVGSNSCSPGDPLVLER 281
>SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27)
Length = 468
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +2
Query: 353 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEG 481
+RP D+ DVR ++ R+RV +++ K+ REELE +++ +H G
Sbjct: 28 RRPDDVLRDVRGLKLRQRVSLVLNDKVLREELEDIVENFVHNG 70
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 288 TQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTS 467
T + AP PR ++ +S TSTP + SA S PR+ S + STS
Sbjct: 58 TSNSTTRAPSTSTPRAGSTTTTSAPSTSTPRTGSTTTTSAPSTSTPRTGSTTTTSAPSTS 117
Query: 468 RCTRAAT 488
+ + T
Sbjct: 118 TTSNSTT 124
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +3
Query: 288 TQRRSRTAPDPCPPRRKTSA*SSVRP-TSTPMSAKWNAGSASKLSCPRSCSAKNWNGSST 464
T R T P TS ++ P TSTP + SA S PR+ S + ST
Sbjct: 41 TPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPRAGSTTTTSAPSTSTPRTGSTTTTSAPST 100
Query: 465 SRCTRAATLRSCRGSRRWSAGDCT 536
S +T + S ++ T
Sbjct: 101 STPRTGSTTTTSAPSTSTTSNSTT 124
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 323 STEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELER 454
+T+EE ER K + D++ E ER+KR EA + REE ER
Sbjct: 411 TTDEEKERKKSETKNKDSEDEEKERKKR-EAEEEEERRREEEER 453
>SB_8580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATLRSCRGSRRWS 521
+CP S N +GS T RC R TL + + RWS
Sbjct: 68 TCPASADCVNNDGSYTCRCKRGYTLVNKTCTARWS 102
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATL--RSCRGSRRWSAGDCTPEASGYGCV 563
+CP S N +GS T RC R TL ++C+ + G T AS CV
Sbjct: 296 TCPASADCVNNDGSYTCRCKRGYTLVNKTCKDIDECALGVATCPASA-DCV 345
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATL 491
+CP S N NGS T RC R TL
Sbjct: 337 TCPASADCVNNNGSYTCRCKRGFTL 361
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATL--RSCRGSRRWSAGDCTPEASGYGCV 563
+CP S N NGS T RC TL +C + + G T AS CV
Sbjct: 255 NCPASADCVNNNGSYTCRCKPGYTLVNNTCIDTDECALGVATCPASA-DCV 304
>SB_2182| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 299
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATLRSCRGSRRWS 521
+CP S N +GS T RC R TL + + RWS
Sbjct: 19 TCPASADCVNNDGSYTCRCKRGYTLVNKTCTARWS 53
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATL 491
+CP S N NGS T RC R TL
Sbjct: 268 TCPASADCVNNNGSYTCRCKRGFTL 292
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATL--RSCRG 506
+CP S N NGS T RC TL +C+G
Sbjct: 206 NCPASADCVNNNGSYTCRCKPGFTLVNNTCKG 237
>SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018)
Length = 1066
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +2
Query: 290 SETIPNGTGPLSTEEEDERL--KQRPADIDADVREMERRKR-VEALMSSKLFREEL---- 448
S T P+ + + ++++ QR +ID E+ER +R +E ++ REEL
Sbjct: 151 SSTTPSKRAAIEAAKLEQKMIALQRRQEIDRRRDELERERRELERSSEREILREELSAAQ 210
Query: 449 --ERVLDQQMHEGGDAPLLQRI 508
+R+L+ Q H+ PL +I
Sbjct: 211 VIQRILEDQPHDQSARPLSDKI 232
>SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1054
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATLRSCRGSRRWS 521
+CP S N +GS T RC R TL + + RWS
Sbjct: 286 TCPASADCVNNDGSYTCRCKRGYTLVNKTCTARWS 320
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATLRS 497
+CP S N +GS T RC R TL++
Sbjct: 473 TCPASADCVNNDGSYTCRCKRGYTLKN 499
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATLRS 497
+CP S N +GS T RC R TL +
Sbjct: 111 TCPASADCVNNDGSYTCRCKRGYTLNN 137
>SB_33722| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 124
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATL--RSCRGSRRWSAGDCTPEASGYGCV 563
+CP S N++GS T RC R TL ++C + G T AS CV
Sbjct: 11 NCPASADCFNYDGSYTCRCKRGYTLVNKTCTDIDECALGVATCPASA-DCV 60
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATL 491
+CP S N++GS T RC R TL
Sbjct: 93 NCPASADCFNYDGSYTCRCKRGYTL 117
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 305 NGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKL--FREELE-RVLDQQMH 475
N + S E++++ LKQ+ AD+++ R R K A + SKL +E+L+ ++ +
Sbjct: 1621 NESARASLEKQNKDLKQKLADLESSTR--SRHKMAIASLESKLTNMQEQLDLETKERALQ 1678
Query: 476 EGGDAPLLQRIKEMV 520
+ L ++IKE++
Sbjct: 1679 SKANRKLERKIKELM 1693
>SB_31615| Best HMM Match : GCC2_GCC3 (HMM E-Value=0.053)
Length = 870
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 269 VGMAETD-SETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRV 409
+G+ E + E + T P+ E+EDE + + D DA + ++R+KRV
Sbjct: 822 LGILEVELEEPVVEQTNPIDGEDEDEEILEEQQDEDA--KRVKRKKRV 867
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 441 KNWNGSSTSRCTRAATLRSCRGSRRWSAGDCTPEASGYGCVVHIFML 581
+N S+ +C R +L+ C GS + G C P + Y VVH +L
Sbjct: 360 RNIRKSTIEQCIRPLSLKPCLGSLFETPG-CAPAIAQYSDVVHALVL 405
>SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14)
Length = 506
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Frame = +3
Query: 291 QRRSRTAPDPCPPRR-KTSA*SSVRPTSTPMSAKWNAGSASKL---SCPRSCSAKN--WN 452
+RR R P PCPPR SA SS P + NAG+ ++ + +C ++
Sbjct: 78 RRRRRRRPPPCPPRNCAVSAWSSWGPCTHQCG---NAGTQTRTRTKTVSEACPGGRCPYH 134
Query: 453 GSSTSRCTRAATLRSCRGSRRWSAGDCTPEASGYG-CVVHI 572
S + C R A CR AG C A G C H+
Sbjct: 135 FSESQACNRNA----CRNGGTPHAGRCGCRAGFTGTCCEHV 171
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 339 TSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTSRCTRAATLRSCRGSR 512
T+ S + +T A+ N + L P C+ WNG +T A LR CR SR
Sbjct: 945 TTRESQLMSYATSSFARRNKRAKGFLQHPTVCNI-TWNGPTTKLLYGVAPLRQCRTSR 1001
>SB_38884| Best HMM Match : SpoA (HMM E-Value=1.5)
Length = 399
Score = 29.9 bits (64), Expect = 2.1
Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Frame = +3
Query: 240 LA*QINRLELSEWLRRTQRRS----RTAPDPCPP--RRKTSA*SSVRPTSTPMSAKWNAG 401
LA I L + WL QRR+ RTA DP P R A V P N
Sbjct: 159 LANGIKNLHVRLWLPSRQRRANHEPRTARDPTSPWTSRSRKALGKVEP---------NQQ 209
Query: 402 SASKL-SCPRSCSAKNWNGSSTSRCTRAATLRSC--RGSRRWSA 524
S ++ SC R +A G+ + A R C R +RW A
Sbjct: 210 SEERVASCRRCAAAAGGPGAERAAAGSALARRRCRLRNGKRWHA 253
>SB_31862| Best HMM Match : E7 (HMM E-Value=4.4)
Length = 584
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 339 TSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTSRCTRAATLRSCRGSR 512
T+ S + +T A+ N + L P C+ WNG +T A LR CR SR
Sbjct: 469 TTRESQLMSYATSSFARRNKRAKGFLQHPTVCNI-TWNGPTTKLLYGVAPLRQCRTSR 525
>SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24)
Length = 298
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Frame = +2
Query: 263 RAVGMAETDSETIPNGTGP---------LSTEEEDERLKQRPADIDADVREMERRKR-VE 412
+A G DS T+ G G L + EED ++R + + ++ E KR E
Sbjct: 58 QASGAGVEDSSTVAYGVGEAGSKVKVTRLESMEEDREKRRREKEEEERLKRAEEEKRREE 117
Query: 413 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVGGRLHT 538
K EEL+R +Q + L++ K+ +G + T
Sbjct: 118 KRREEKRREEELKRERKEQERREKERQRLEKEKKEIGFKSST 159
>SB_48850| Best HMM Match : EGF_CA (HMM E-Value=2.1e-27)
Length = 83
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATL 491
+CP S N++GS T RC R TL
Sbjct: 52 NCPASADCFNYDGSYTCRCKRGYTL 76
>SB_46539| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 300
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +2
Query: 65 KCVFLQI*CF-VLSAC-YDRRSN-LCVNFVCSDHLICRYA 175
+CV + I C+ V+ C Y+ S CV+F+ +++CRYA
Sbjct: 157 RCVVMSICCYDVMLLCRYNVTSKYFCVDFLICCYVVCRYA 196
>SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 297 RSRTAPDPCPPRRKTSA*SSVRPTSTP 377
R + P P PPRRK S S P +TP
Sbjct: 800 RKHSDPPPLPPRRKKSHEDSPSPCTTP 826
>SB_31603| Best HMM Match : DUF1279 (HMM E-Value=0.51)
Length = 161
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 272 GMAETDSETIPNGTGPLSTEEED-ERLKQRPADIDADVREMERRKRVEALMSSKLFREEL 448
G+ TD ETI P S +E ER ++R ++ID E+ER R L + K RE +
Sbjct: 5 GVVATDRETIDGPNTPESRRQEARERNEERLSEID----ELERENR--ELENQKPLRERI 58
Query: 449 ERV 457
+ +
Sbjct: 59 KAI 61
>SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.1 bits (62), Expect = 3.6
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 294 RRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTSR- 470
RR RT PR ++ + SS R + SA+ GSASK+ PR+ S + +S+
Sbjct: 461 RRKRTLSGGSLPRGRSRSLSSDRVGTRLPSAR--KGSASKIGIPRTSSTGSLGSRRSSQS 518
Query: 471 CTRAATL--RSCRGSRRWSA 524
T A L +S R +RR S+
Sbjct: 519 STDGAVLTDQSNRQTRRRSS 538
>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 791
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +3
Query: 258 RLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCS 437
R EW QR T+P PRR +S+ SS +S+ S+ + S S+ P S S
Sbjct: 170 RFGSDEWHDPWQRT--TSPKRRSPRRSSSSYSSRSRSSSSSSSGSSHSSRSQSHTPSSGS 227
Query: 438 AKNWNGSSTSRCTRAATLRS 497
+ S SR + RS
Sbjct: 228 GSRNSSRSASRSQSHSVSRS 247
>SB_6350| Best HMM Match : Acyl_transf_1 (HMM E-Value=0.87)
Length = 721
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = -3
Query: 278 PFRQLESIDLSSKTWVSNPVARVLQESCTVQQMARRSDKLDDHYTQNSHTNLNGDRNRH 102
P RQLE+ + + +A L+ C SDKLD T L +R H
Sbjct: 448 PHRQLEAFKIFNTCLTVRTIATRLRTLCAYTYTMSVSDKLDPQRTPRIPLGLKAERTVH 506
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 5/43 (11%)
Frame = +3
Query: 447 WNGSSTSR-----CTRAATLRSCRGSRRWSAGDCTPEASGYGC 560
WNG R C RA S R W DCT + Y C
Sbjct: 1263 WNGEPNDRGITGSCVRATMTVSSRDWMYWVDSDCTENSHAYVC 1305
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +2
Query: 302 PNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEG 481
PNG P+ + RL RPAD+ D E + R L R E + +D +G
Sbjct: 296 PNGRPPVPRQGPGSRLPPRPADMKPDGEREESKPR------PALLRPEDIQAMDDDDDDG 349
Query: 482 G 484
G
Sbjct: 350 G 350
>SB_46351| Best HMM Match : EGF_CA (HMM E-Value=2.3e-14)
Length = 58
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 417 SCPRSCSAKNWNGSSTSRCTRAATLRS 497
+CP S N +GS T RC R TL++
Sbjct: 27 TCPASADCVNNDGSYTCRCKRGYTLKN 53
>SB_45968| Best HMM Match : DUF1279 (HMM E-Value=1.2)
Length = 180
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +2
Query: 272 GMAETDSETI--PNGTGPL---STEEEDERLKQRPADIDADVREMERRK 403
G+ TD ETI PN + + E +ERL +R +++ + RE+E +K
Sbjct: 23 GVVTTDRETIDDPNTSESRRQEARERNEERLSERIEELERENRELENQK 71
>SB_40000| Best HMM Match : Pox_A32 (HMM E-Value=0.053)
Length = 946
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -3
Query: 416 ELRRASGVPFRGHRRRCRPDAASSARLPPRWTGVRCRSGSSLSPSQPFR 270
E R + + RG RR AA+ R + + CRSG S S S+ FR
Sbjct: 820 EPARCNTLDRRGRRRDSARKAAAGGRTADQGSAA-CRSGDSASRSRTFR 867
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 GLRDDPERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEARRSS 417
G RD R +P H RR+ + R RR R+ +P RR S
Sbjct: 205 GYRDQRRRSHSPAHH--RRSRSRSRSRSPRRRRRSRSPRRRRRS 246
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 10/45 (22%)
Frame = +1
Query: 325 HRGGRRALEAASGRHRR----------RCPRNGTPEARRSSHVLE 429
H+GG RA + +HRR R PR GTP R ++ E
Sbjct: 873 HKGGNRATQEREKKHRRNQPDKRRTQMRIPRKGTPRKRNQTNPRE 917
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 282 RRTQR-RSRTAPDPCPPRRKTSA*SSVRPTSTPMSAK 389
RR +R R R +P PC P KT A PTS + AK
Sbjct: 163 RRGRRDRFRRSPGPCTPVVKTPAVPVRAPTSEEVQAK 199
>SB_29813| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 659
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -3
Query: 245 SKTWVSNPVARVLQESCTVQQMARRSDKLDDHYTQNSHTNL 123
S TW N + + S +++ R + L+DH+TQ+ ++N+
Sbjct: 206 SLTWFINLYLQSILNSERSPELSERIEFLNDHFTQSIYSNV 246
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 278 AETDSETIPNGTGPLSTEEEDERLKQRP--ADIDADVREMERRKRVEALMSSKLFREELE 451
A++D++ T L E L Q + +D++ EMER++ L+ S+ ELE
Sbjct: 570 ADSDAQKFKKLTKELLALERAYALLQAQVGSTMDSEREEMERQQLQSDLIESQARIHELE 629
Query: 452 RVLD 463
R+LD
Sbjct: 630 RMLD 633
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 282 RRTQR-RSRTAPDPCPPRRKTSA*SSVRPTSTPMSAK 389
RR +R R R +P PC P KT A PTS + AK
Sbjct: 163 RRGRRDRFRRSPGPCTPVVKTPAVPVRAPTSEEVQAK 199
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 282 RRTQR-RSRTAPDPCPPRRKTSA*SSVRPTSTPMSAK 389
RR +R R R +P PC P KT A PTS + AK
Sbjct: 434 RRGRRDRFRRSPGPCTPVVKTPAVPVRAPTSEEVQAK 470
>SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22)
Length = 1043
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/46 (21%), Positives = 28/46 (60%)
Frame = +2
Query: 332 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQ 469
++ + +K++ ++ + RE+ER+ VE L ++E++ +L ++
Sbjct: 80 QKQQDIKRQRETLEREQRELERKGEVEKLEEELTAQKEIQSILQEE 125
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +3
Query: 402 SASKLSCPRSCSAKNWNGSSTS-RCTRAATLRSCRGSRRWSAGDCTPEASGYGCV 563
S +C + C + TS +C + RSC +C E G GCV
Sbjct: 415 SCKAKNCDQECPGNQCRMACTSDKCRQVCAGRSCSMECARGTRECHQECKGGGCV 469
>SB_16535| Best HMM Match : ShTK (HMM E-Value=2.2e-18)
Length = 101
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 426 RSCSAKNWNGSSTSRCTRAATLRSCRGSRRWSAGDCTPEASGYGCV 563
RSC + GSS +C + A C+ + +W C P + G CV
Sbjct: 23 RSCEDSTFKGSSEFQCQKWAKAGECQRNTKWMFHYC-PVSCGI-CV 66
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Frame = +3
Query: 294 RRSRTAPDPCPPRRKTSA*SSVRP--TSTPMSAKWNAGSAS---------KLSCPRSCSA 440
RR R +P P PPRR+ + S+ P S+P+ +++ K++ P
Sbjct: 920 RRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRARRKVASPEEQDR 979
Query: 441 KNWNGSSTSRCTRAATLRSCRGSRR 515
+ NG + SR + ++ +GS+R
Sbjct: 980 QKSNGRN-SRSVSPSAVKRTKGSKR 1003
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,411,762
Number of Sequences: 59808
Number of extensions: 419874
Number of successful extensions: 2071
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2058
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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