Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0574
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 29 0.14
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 26 0.99
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 3.0
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 24 4.0
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 9.2
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 9.2
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 9.2
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 9.2
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 9.2
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 23 9.2
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 29.1 bits (62), Expect = 0.14
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 275 MAETDSETIPNGTGPLSTEEEDERLKQRPADID-ADVREMERRKRVEALMSSKLFREELE 451
+ E E +P P E+E+ ++ AD + AD E E + + L ++L EELE
Sbjct: 61 LPEDAPEPVPEDGSPDEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELE 120
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 26.2 bits (55), Expect = 0.99
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 323 STEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGD 487
+ + +E+ +RP+ + R ERR + A M+ R + +++ EGGD
Sbjct: 1062 TVRQREEQCGERPSMPSSSPRTSERRANIRARMARLRQRHRQHQQDERRGVEGGD 1116
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 24.6 bits (51), Expect = 3.0
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3
Query: 285 RTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSST 464
R++ RSR+ R S R S S +AG S+ S RS S S
Sbjct: 1102 RSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAG--SRKSGSRSRSRSGSQASRG 1159
Query: 465 SRCTRAATLRSCRGSR-RWSAGDCTPEAS 548
SR +R+ + RS GSR R +G + +AS
Sbjct: 1160 SRRSRSRS-RSRSGSRSRSRSGSGSRQAS 1187
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 24.2 bits (50), Expect = 4.0
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 326 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP 493
T E + ++ R AD +A RE+E RKR E +++ E D + + G P
Sbjct: 20 TRESLQAIEARIADEEAKQRELE-RKRAEGESDFGRKKKKKEIRYDDEDEDEGPQP 74
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 23.0 bits (47), Expect = 9.2
Identities = 9/67 (13%), Positives = 32/67 (47%)
Frame = +2
Query: 314 GPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP 493
GP E+ ++ + + + ++ +++++ + + + E ++ QQ H+ +
Sbjct: 216 GPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQ 275
Query: 494 LLQRIKE 514
QR+++
Sbjct: 276 QQQRVQQ 282
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.0 bits (47), Expect = 9.2
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 310 HRTPVHRGGRRALEAASGRHRRRCPRN-GTPEARRSSHVLEA 432
H +PV GGR + +RR+ TP R +H A
Sbjct: 465 HWSPVFMGGRSGILGRESENRRKLVTTVSTPVFDRRNHSTRA 506
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.0 bits (47), Expect = 9.2
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 416 ELRRASGVPFRGHRRRCRPDAASSARLPPRWT 321
E RR R RRRCRP A R PP T
Sbjct: 490 EGRRRRRAIARARRRRCRPRA---RRNPPATT 518
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.0 bits (47), Expect = 9.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -3
Query: 104 H*ARNIIFVKTRTYRSLYNFYSTSLTDTACTG 9
H NII + Y S Y L TAC G
Sbjct: 3102 HNTSNIIGITEDHYSSCYPIEYNGLLTTACAG 3133
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.0 bits (47), Expect = 9.2
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 514 DGRRETAHRKPQGMVALFISLCCC 585
D +TAHR G A +I C C
Sbjct: 672 DVELQTAHRGAAGRQATWIEQCTC 695
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 23.0 bits (47), Expect = 9.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 383 REMERRKRVEALMSSKLFREELERVLDQ 466
++ + RKR EAL+ S EEL ++L +
Sbjct: 109 KQNKPRKRPEALLISDCTSEELAKLLKE 136
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,470
Number of Sequences: 2352
Number of extensions: 13409
Number of successful extensions: 60
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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