Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0574
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 48 9e-06
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 48 9e-06
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 48 9e-06
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 48 9e-06
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 48 9e-06
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 48 9e-06
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 48 9e-06
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 32 0.34
AL132949-13|CAB70106.2| 425|Caenorhabditis elegans Hypothetical... 32 0.45
AF197575-1|AAF18441.1| 425|Caenorhabditis elegans ASC-1 protein. 32 0.45
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 2.4
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 3.2
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 29 3.2
U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical pr... 29 4.2
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 29 4.2
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 28 5.6
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 28 5.6
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 28 5.6
Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 28 7.4
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 27 9.8
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 27 9.8
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 27 9.8
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 27 9.8
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +2
Query: 353 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 520
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 521 --GGRLHTGSLRVW 556
G + G+L +
Sbjct: 87 VPQGNMSFGNLHTY 100
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +2
Query: 353 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 520
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 521 --GGRLHTGSLRVW 556
G + G+L +
Sbjct: 87 VPQGNMSFGNLHTY 100
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein
1, isoform e protein.
Length = 718
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +2
Query: 353 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 520
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 521 --GGRLHTGSLRVW 556
G + G+L +
Sbjct: 87 VPQGNMSFGNLHTY 100
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +2
Query: 353 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 520
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 521 --GGRLHTGSLRVW 556
G + G+L +
Sbjct: 87 VPQGNMSFGNLHTY 100
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein
1, isoform c protein.
Length = 702
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +2
Query: 353 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 520
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 521 --GGRLHTGSLRVW 556
G + G+L +
Sbjct: 87 VPQGNMSFGNLHTY 100
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +2
Query: 353 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 520
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 521 --GGRLHTGSLRVW 556
G + G+L +
Sbjct: 87 VPQGNMSFGNLHTY 100
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +2
Query: 353 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 520
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 521 --GGRLHTGSLRVW 556
G + G+L +
Sbjct: 87 VPQGNMSFGNLHTY 100
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 35.1 bits (77), Expect = 0.049
Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Frame = +3
Query: 300 SRTAPDPC--PPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTSRC 473
S T PC PP A S+ A W AGS + +SCP + + G+S S C
Sbjct: 1248 SGTGTGPCYTPPLTPVGA---TLTYSSGYFAPWTAGSTATMSCP---AGQTVIGTSISYC 1301
Query: 474 TRAA---TLRSCRGSRRWSAGDCT------PEASGYGCVV 566
T +A L SC GS A T P A YG +V
Sbjct: 1302 TNSAWSPALGSCSGSSVGQASTTTTTCSFLPIAPPYGSIV 1341
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 329 EEEDERLKQRPADIDADVREMERRKRV-EALMSSKLFREELERVLDQQMHEGGDAPLLQR 505
EE+++R K ++ ++E E+RKRV E M K EE + L+ +M E + ++R
Sbjct: 449 EEDEKRRKAEESERVRKLKEEEKRKRVLEEEMEMKRKNEEAKIKLEAEMREKAEQAEIKR 508
Query: 506 IKE 514
+E
Sbjct: 509 REE 511
>AL132949-13|CAB70106.2| 425|Caenorhabditis elegans Hypothetical
protein Y53F4B.15 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +2
Query: 281 ETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 460
++D TI N P + + E LK R ++ A +RE ER+K V +L E+ R
Sbjct: 141 QSDYSTIENS--PFLSASDREALKLRREELKA-LREKERKKFVVSLDFDGGVVHEMTRRS 197
Query: 461 DQQMHEGGDAPLLQRIKEMV 520
+ + + P++QRI E V
Sbjct: 198 GTEALQDKNDPVIQRIMERV 217
>AF197575-1|AAF18441.1| 425|Caenorhabditis elegans ASC-1 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +2
Query: 281 ETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 460
++D TI N P + + E LK R ++ A +RE ER+K V +L E+ R
Sbjct: 141 QSDYSTIENS--PFLSASDREALKLRREELKA-LREKERKKFVVSLDFDGGVVHEMTRRS 197
Query: 461 DQQMHEGGDAPLLQRIKEMV 520
+ + + P++QRI E V
Sbjct: 198 GTEALQDKNDPVIQRIMERV 217
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical
protein T05G5.1 protein.
Length = 411
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 329 EEEDERLKQRPADIDADVREMERRKR-VEALMSSKLFREELERVLDQQMHEGGD 487
EEE RL + +A VR+ ERR++ E + +L + + + +Q +EGGD
Sbjct: 190 EEESRRLAAQRETDEARVRDEERRRQETEKEVEKELNDKRTQSMNEQFEYEGGD 243
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/66 (22%), Positives = 37/66 (56%)
Frame = +2
Query: 320 LSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPLL 499
L E ED R+ + +++++ E E +++ K ++L+ +++++++ GD L
Sbjct: 49 LEFEPEDRRVPEVAEEVESEDEE-EEDVQIKYPYERKDAYQDLQERIERRLNDSGDEKLE 107
Query: 500 QRIKEM 517
Q+ KE+
Sbjct: 108 QKAKEL 113
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 332 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 451
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 332 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 451
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 332 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 451
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 356 RPADI-DADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVGGRL 532
+P +I D V + + K V SS FR E VLD + G PL +K +
Sbjct: 302 KPREIFDPKVLDYDPTKMVGEWKSSSKFRPERPLVLDSVLDAIGKTPL---VKLQHVPKA 358
Query: 533 HTGSLRVWLRCSYLYA 580
H V+++C +L A
Sbjct: 359 HGVRCNVYVKCEFLNA 374
>U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical
protein T14E8.2 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 275 MAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELER 454
M E D + + N + S EEE+ + + D D +E ERR++ EA R L
Sbjct: 248 MNEKDDDDV-NKSVEESDEEEENQESEEQEDNDKAEKEEERRRQEEAARQHSKRRRTLRH 306
Query: 455 VL 460
+L
Sbjct: 307 LL 308
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 20 RCLLS*CCKNYKENDKCVFLQI*CFVLSACYDRRSNLCVN--FVCSDHLIC 166
RC CK++ + C +Q C + + S+ C+N FVC L C
Sbjct: 231 RCDAEVDCKDHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVCDGELDC 281
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 20 RCLLS*CCKNYKENDKCVFLQI*CFVLSACYDRRSNLCVN--FVCSDHLIC 166
RC CK++ + C +Q C + + S+ C+N FVC L C
Sbjct: 233 RCDAEVDCKDHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVCDGELDC 283
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 258 RLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 413
R E+ E R R + T P P R++++ + P+ KWN G+AS+
Sbjct: 876 RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 258 RLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 413
R E+ E R R + T P P R++++ + P+ KWN G+AS+
Sbjct: 876 RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +2
Query: 326 TEEEDERLKQRPADIDAD---VREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPL 496
T E+ LK D+ A+ ++EM+ R L SK F+E L R+ D+ D
Sbjct: 82 TTSEENNLKILNRDLVAENLELKEMKEELRKIWLSDSKKFQEALTRISDENTKLQKDCHE 141
Query: 497 LQRIKE 514
L+ I++
Sbjct: 142 LESIRQ 147
>Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical
protein C27A7.1b protein.
Length = 824
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 413 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVG 523
A+ SSK+ EEL R L Q + + G P L+R+ M G
Sbjct: 82 AMSSSKVQLEELTRKLSQPLEQLG--PTLERLSNMPG 116
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 413 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVG 523
A+ SSK+ EEL R L Q + + G P L+R+ M G
Sbjct: 87 AMSSSKVQLEELTRKLSQPLEQLG--PTLERLSNMPG 121
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/61 (19%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 332 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLD-QQMHEGGDAPLLQRI 508
+ +E +KQ+ + + + + ++++E L KLF + + L ++ H+ + L+++
Sbjct: 249 KREEEIKQQNQEREKQINDDFEKRKLEKLQREKLFEKNKQAKLQREKAHQESERRKLEKL 308
Query: 509 K 511
K
Sbjct: 309 K 309
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 287 DSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVE 412
+S T+ N GP+ E EDE PA I R+ ++R R E
Sbjct: 1694 ESATVTNLEGPVKIEIEDENWMAPPA-ITETSRKSKKRLRAE 1734
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical protein
ZK662.4 protein.
Length = 1440
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 326 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEG 481
T E ++L Q+ D E ER E + KLFR+ ++VL+ H+G
Sbjct: 1059 TPAELKKLGQQYFDYREPEPEPERNDVDEQEIIPKLFRQPRKQVLEADQHDG 1110
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical protein
ZK662.4 protein.
Length = 1440
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 326 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEG 481
T E ++L Q+ D E ER E + KLFR+ ++VL+ H+G
Sbjct: 1059 TPAELKKLGQQYFDYREPEPEPERNDVDEQEIIPKLFRQPRKQVLEADQHDG 1110
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 326 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEG 481
T E ++L Q+ D E ER E + KLFR+ ++VL+ H+G
Sbjct: 1059 TPAELKKLGQQYFDYREPEPEPERNDVDEQEIIPKLFRQPRKQVLEADQHDG 1110
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 326 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEG 481
T E ++L Q+ D E ER E + KLFR+ ++VL+ H+G
Sbjct: 1059 TPAELKKLGQQYFDYREPEPEPERNDVDEQEIIPKLFRQPRKQVLEADQHDG 1110
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 326 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEG 481
T E ++L Q+ D E ER E + KLFR+ ++VL+ H+G
Sbjct: 1059 TPAELKKLGQQYFDYREPEPEPERNDVDEQEIIPKLFRQPRKQVLEADQHDG 1110
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 287 DSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVE 412
+S T+ N GP+ E EDE PA I R+ ++R R E
Sbjct: 1694 ESATVTNLEGPVKIEIEDENWMAPPA-ITETSRKSKKRLRAE 1734
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 335 EDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHE 478
+D R K++ DI REMER+KR AL K E +R ++ HE
Sbjct: 354 DDMRKKEKEKDIKK--REMERKKR-HALQEKKEEAEAAKRREARKKHE 398
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,825,358
Number of Sequences: 27780
Number of extensions: 292383
Number of successful extensions: 1336
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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