Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0572
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0282 - 32824950-32825135,32825247-32825505,32825651-328259... 143 1e-34
02_05_0144 + 26258841-26258948,26259099-26259212,26259335-262595... 143 2e-34
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093... 142 4e-34
01_05_0337 + 21115388-21115961,21116471-21116597,21116683-211168... 63 3e-10
01_01_1191 + 9487835-9488467,9492584-9492787 33 0.32
06_03_0810 - 24817268-24817350,24817547-24817697,24818441-248185... 31 0.74
02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523,134... 31 0.74
05_06_0158 - 26054487-26054672,26054770-26055018,26056003-260566... 31 1.3
12_02_0858 + 23740589-23743233,23743362-23743503,23744778-237449... 30 2.3
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 29 3.0
02_04_0030 + 19041107-19041334,19041413-19041733 29 3.9
11_06_0074 - 19821699-19823702 29 5.2
11_01_0311 + 2322511-2323527 29 5.2
08_01_0089 - 646310-646397,646566-647932 29 5.2
01_01_0104 + 780442-781273,782514-783424 28 6.9
11_03_0158 + 10911997-10912078,10912203-10912288,10913780-109138... 28 9.1
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 28 9.1
04_03_0690 + 18751601-18753667 28 9.1
03_06_0100 - 31647506-31647664,31647752-31647835,31647933-316480... 28 9.1
03_01_0065 + 529200-529438,529770-529929,530217-530299,530398-53... 28 9.1
01_06_0580 - 30380260-30380747,30380816-30381107 28 9.1
01_01_0241 + 1992553-1993231,1993820-1993918,1994611-1994649,199... 28 9.1
>03_06_0282 -
32824950-32825135,32825247-32825505,32825651-32825901,
32826309-32826425,32826613-32826687,32826788-32827009,
32827396-32827509,32827694-32827801
Length = 443
Score = 143 bits (347), Expect = 1e-34
Identities = 83/211 (39%), Positives = 117/211 (55%)
Frame = +3
Query: 9 RSQRXVTRXEVKALSALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLELA 188
R V EV AL+ LMT+K A ++P+GGAK GI +P + S ELE++TR FT ++
Sbjct: 70 RYHHEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPGDLSISELERLTRVFTQKI- 128
Query: 189 KKGFIGPGVDVPAPDMGTGEREMSWIADTYAKTVGFQDINAHACVTGKPINQGGIHGRVS 368
IG DVPAPDMGT + M+WI D Y+K G+ + A VTGKP++ GG GR +
Sbjct: 129 -HDLIGIHTDVPAPDMGTNSQTMAWILDEYSKFHGY----SPAVVTGKPVDLGGSLGRDA 183
Query: 369 ATGRGVFHGLENFINEANYMSMIGTTPGWGGKTFIVQGFGNVGLHTCRYLVRAGATCIGV 548
ATGRGV E + E G G+ F++QGFGNVG + + AG I +
Sbjct: 184 ATGRGVLFATEALLAEHG--------KGIAGQRFVIQGFGNVGSWAAQLISEAGGKVIAI 235
Query: 549 IEHDGSIYNPDGINPKALEDYRIXNXTVVGF 641
+ G++ N +G++ L + N + GF
Sbjct: 236 SDVTGAVKNSNGLDIAKLMKHSSENRGIKGF 266
>02_05_0144 +
26258841-26258948,26259099-26259212,26259335-26259556,
26259660-26259734,26259827-26259943,26260046-26260296,
26260833-26260908,26261045-26261131,26261216-26261401
Length = 411
Score = 143 bits (346), Expect = 2e-34
Identities = 86/202 (42%), Positives = 114/202 (56%)
Frame = +3
Query: 36 EVKALSALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGV 215
EV AL+ LMT+K A VP+GGAK GI P E S ELE++TR FT ++ IG
Sbjct: 79 EVNALAQLMTWKTAVAAVPYGGAKGGIGCTPGELSRSELERLTRVFTQKI--HDLIGINT 136
Query: 216 DVPAPDMGTGEREMSWIADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRGVFHG 395
DVPAPDMGT + M+WI D Y+K G ++ A VTGKPI+ GG GR +ATGRGV +
Sbjct: 137 DVPAPDMGTNAQTMAWILDEYSKFHG----HSPAVVTGKPIDLGGSLGRDAATGRGVMYA 192
Query: 396 LENFINEANYMSMIGTTPGWGGKTFIVQGFGNVGLHTCRYLVRAGATCIGVIEHDGSIYN 575
E + E Y I G TF++QG GNVG + + + G + V + G+I N
Sbjct: 193 TEALLTE--YSESI------SGSTFVIQGLGNVGSWAAKLIHQKGGKIVAVGDVTGAIRN 244
Query: 576 PDGINPKALEDYRIXNXTVVGF 641
GI+ AL +R ++ F
Sbjct: 245 KSGIDIPALLKHRSEGGSLEDF 266
>04_04_0678 +
27207340-27207447,27207555-27207668,27209111-27209332,
27209407-27209481,27209569-27209685,27210145-27210395,
27210686-27210761,27210862-27210948,27211037-27211222
Length = 411
Score = 142 bits (343), Expect = 4e-34
Identities = 84/193 (43%), Positives = 110/193 (56%)
Frame = +3
Query: 36 EVKALSALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGV 215
EV AL+ LMT+K A +P+GGAK GI P E S ELE++TR FT ++ IG
Sbjct: 79 EVNALAQLMTWKTAVAAIPYGGAKGGIGCAPGELSTSELERLTRVFTQKI--HDLIGAHT 136
Query: 216 DVPAPDMGTGEREMSWIADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRGVFHG 395
DVPAPDMGT + M+WI D Y+K G ++ A VTGKPI+ GG GR +ATGRGV +
Sbjct: 137 DVPAPDMGTNSQTMAWILDEYSKFHG----HSPAVVTGKPIDLGGSLGRDAATGRGVMYA 192
Query: 396 LENFINEANYMSMIGTTPGWGGKTFIVQGFGNVGLHTCRYLVRAGATCIGVIEHDGSIYN 575
E + E G TF++QGFGNVG R + G I + + GSI N
Sbjct: 193 TEALLAEHG--------KSISGSTFVIQGFGNVGSWAARIIHEKGGKVIALGDVTGSIRN 244
Query: 576 PDGINPKALEDYR 614
+G++ AL +R
Sbjct: 245 KNGLDIPALMKHR 257
>01_05_0337 +
21115388-21115961,21116471-21116597,21116683-21116884,
21117460-21117546,21117622-21117681,21117800-21117886,
21118451-21118522,21118675-21118730,21118812-21118897,
21119427-21119517,21119593-21119750,21119827-21119918,
21120110-21120190,21120282-21120479
Length = 656
Score = 62.9 bits (146), Expect = 3e-10
Identities = 51/189 (26%), Positives = 78/189 (41%)
Frame = +3
Query: 24 VTRXEVKALSALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFI 203
+T K L+ T K A GGA G +PK SE E+ + + F EL + ++
Sbjct: 289 MTLSVAKFLAFEQTLKNALSQYKLGGAAGGSDFDPKGKSESEIMRFCQSFMDELYR--YL 346
Query: 204 GPGVDVPAPDMGTGEREMSWIADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRG 383
GP D PA D+G G REM ++ Y + G N TG I G R ATG G
Sbjct: 347 GPDQDFPAEDVGVGPREMGYLFGQYRRLSGHFQGN----FTGPKIFWSGSSFRTEATGYG 402
Query: 384 VFHGLENFINEANYMSMIGTTPGWGGKTFIVQGFGNVGLHTCRYLVRAGATCIGVIEHDG 563
+ + + N G ++ G G + +H L+ A + V + G
Sbjct: 403 LVFFARVVLADMN--------KELKGLRCVISGSGKIAMHVLEKLLSCEAIPVTVSDSKG 454
Query: 564 SIYNPDGIN 590
+ + +G +
Sbjct: 455 YLLDTEGFD 463
>01_01_1191 + 9487835-9488467,9492584-9492787
Length = 278
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 393 GLENFINEANYMSMIGTTPGWGGKTFIVQGFGNVGLHTCRYLVRAGATCIGVI--EHDGS 566
G+E F + + + + G+ GK+ +V G GN G+ L GA VI E D
Sbjct: 156 GMETFPGKVVHAADYRSAEGFKGKSVLVVGGGNSGMEIAYDLAVGGAATSIVIRSESDDG 215
Query: 567 IYNPDGINPKALEDY 611
+ DG+ ++ D+
Sbjct: 216 LIGDDGMAGRSYPDH 230
>06_03_0810 - 24817268-24817350,24817547-24817697,24818441-24818542,
24818722-24818802,24818900-24819020,24819284-24819401,
24819514-24819637,24819898-24819963,24820117-24820407,
24820455-24820592,24820967-24821116,24821240-24821410,
24821543-24821746,24821880-24822104,24822461-24822595,
24822995-24823096,24823586-24823882,24823979-24824167,
24824581-24824628,24824872-24825070,24825501-24825730,
24826373-24826568,24826695-24826882
Length = 1202
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 132 EYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSWIADTYAKTVGFQDINA 311
E S H L+K+T + + F+G ++V T E S + D Y TV +D +
Sbjct: 893 EPSPHSLQKLTLQSVKDAVMNQFVGDNMEVSIVGDFTEEEVESCVLD-YLGTVYIKDTDE 951
Query: 312 HAC--VTGKPINQGG 350
AC + G N+ G
Sbjct: 952 RACAYIAGPAPNRWG 966
>02_01_0201 -
1347868-1347925,1348040-1348135,1348447-1348523,
1349385-1349453,1349576-1349629,1350295-1350350,
1350487-1350694,1350978-1351066,1351163-1351187
Length = 243
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 557 VLDNSDASGAGADEVAAS---VESHVTETLDDERLATPTGGCTD 435
+ D+SDAS +GA +VAA+ + E + ++ AT + GC D
Sbjct: 68 IFDSSDASASGAADVAATFAKASRKMDEFIAEDARATSSNGCLD 111
>05_06_0158 -
26054487-26054672,26054770-26055018,26056003-26056611,
26056970-26056972
Length = 348
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 384 VFHGLENFINEANYMSMIGTTPGWGGKTFIVQGFGNVGLHTC 509
V GLE F + S + + GKT +V G GN G+ C
Sbjct: 150 VIDGLEEFRGSVIHTSAYKSGSKFAGKTVLVVGCGNSGMEVC 191
>12_02_0858 +
23740589-23743233,23743362-23743503,23744778-23744990,
23745083-23745190,23745378-23745587,23745881-23746055,
23746197-23746264
Length = 1186
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 347 WHPRQSFSHGQGRIPRLGELHQRSQLHEHDRYNPRL 454
+HP S SHG + QL EH YNPR+
Sbjct: 303 YHPVFSVSHGTSASSSSQHPYMARQLLEHPEYNPRM 338
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 510 RYLVRAGATCIGVIEHDGSIYNPDGINPKALEDYRIXNXTVVGFP 644
R LV AGA +G DG +G+ +ALE++ + TVV P
Sbjct: 664 RVLVAAGAAEVGTHRSDGQRLRCEGLTEEALEEF-LDGVTVVRGP 707
>02_04_0030 + 19041107-19041334,19041413-19041733
Length = 182
Score = 29.1 bits (62), Expect = 3.9
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Frame = -2
Query: 458 TPTGGCTDHAHVVGFVDEVLQAVEYAPARG*NSAVDATLVNRFASDAGVSVDVLKTDGLR 279
T GC VV VDEV A A R + D ++ F S A D LR
Sbjct: 76 TDRSGCLAAGAVVSLVDEVGSAASIADGRPVKVSTDMSV--SFVSLA----QARPGDRLR 129
Query: 278 ISIGDPRH-FSFAGTHV-----RSGDIHARPNESFFGKFKGETTS 162
I+ H +++ THV +G++ A S FG+ K +TS
Sbjct: 130 ITARALGHKGAYSATHVLISNAATGEVVAEGRHSLFGRMKVVSTS 174
>11_06_0074 - 19821699-19823702
Length = 667
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 123 NPKEYSEHELEKITRRFTLELAKKGF 200
N + ++EH++EKIT ++ + K GF
Sbjct: 27 NIRSFTEHDIEKITSNYSTLIGKGGF 52
>11_01_0311 + 2322511-2323527
Length = 338
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 64 PSSARAWTCLSAVLRPVSRSIPKNTPSMNWKRSLVVSPL-NLPKKDSLGLAWMSPLLTWV 240
PSS R TC S+ S S P + +++++ +L+ +P L + + G + + P L++
Sbjct: 36 PSSTRVSTCSSSSSTTASSSSPTLSVTVSYRATLLAAPAPPLQLRLTWGHSPLGPTLSFA 95
Query: 241 PA 246
P+
Sbjct: 96 PS 97
>08_01_0089 - 646310-646397,646566-647932
Length = 484
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 120 INPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSWIADTYAKTVG 293
I P+ EHE + L L +I GV +P P G GE + +A ++A+ +G
Sbjct: 16 IRPELPPEHETTVHLTPWDLPLLTAEYIQKGVLLPKPPTG-GEHLVKHLASSFARALG 72
>01_01_0104 + 780442-781273,782514-783424
Length = 580
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 126 PKEYSEHELEKITRRFTLELAKKGF 200
P YS +++KITRRF +L + GF
Sbjct: 324 PTRYSFSDVKKITRRFKEQLGQGGF 348
>11_03_0158 +
10911997-10912078,10912203-10912288,10913780-10913857,
10913967-10914098,10914385-10914435,10914529-10914669,
10914754-10914876,10914989-10915066,10915448-10915541,
10915633-10915739,10915936-10916019,10916649-10916744,
10916835-10917023,10917705-10917780,10918507-10918610,
10918708-10918967,10920000-10920086,10920184-10920411,
10920752-10920826,10921264-10921346,10921552-10921661
Length = 787
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 560 VVLDNSDASGAGADEVAASVESHVTETLDDERL 462
+V+D D S G D V SH TE D+E +
Sbjct: 409 MVIDEQDHSDNGGDGSDMDVVSHFTEKFDEETI 441
>06_03_0097 -
16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 375 GRGVFHGLENFINEANYMSMIGTTPGWGGKTF 470
GR FHG A Y + +GT GW +TF
Sbjct: 52 GRRRFHGAFTGGFSAGYYNTVGTKEGWTPQTF 83
>04_03_0690 + 18751601-18753667
Length = 688
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -3
Query: 271 SAIQDISRSPVPMSGAGTSTPGPMNP---FLASSRVKRR 164
S D+ SP+P SGAG + P P P F A+ R+ R+
Sbjct: 67 SITADLFPSPLPSSGAGPTPPPPPPPRGAFEAAERLIRQ 105
>03_06_0100 -
31647506-31647664,31647752-31647835,31647933-31648089,
31648181-31648446,31648524-31648796,31648874-31648985,
31649112-31649331,31649476-31649899
Length = 564
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 483 FGNVGLHTCRYLVRAGATCIGVIEHDGSIYNPDGIN 590
F +G+H + AGAT GS+ P G+N
Sbjct: 270 FAPIGVHIAMIFIMAGATLSATGSFKGSVDVPQGLN 305
>03_01_0065 +
529200-529438,529770-529929,530217-530299,530398-530488,
530585-530680,531107-531220,531325-531408,531493-531648,
531755-531829,532172-532278,532361-532544,532970-533158,
533372-533452,533794-533925,534302-534355,534484-534809,
534925-535030,535491-535640,535763-535909
Length = 857
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 569 NGAVVLDNSDASGAGADEVAASVESHV-TETLDDERLATPTGGCTDHAHVVGFVD 408
+G++V+ SG+G AAS + +V E L L P G H+V +D
Sbjct: 285 DGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLD 339
>01_06_0580 - 30380260-30380747,30380816-30381107
Length = 259
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 259 DISRSPVPMSGAGTSTPGPMNPFLASSRV 173
D + SP P SG GTS P P SS++
Sbjct: 5 DQNPSPTPASGTGTSVPPPGRATTVSSQL 33
>01_01_0241 +
1992553-1993231,1993820-1993918,1994611-1994649,
1994806-1995857
Length = 622
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 126 PKEYSEHELEKITRRFTLELAKKGF 200
PK Y+ EL+KITR F +L + G+
Sbjct: 324 PKRYNYSELKKITRSFKDKLGQGGY 348
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,821,716
Number of Sequences: 37544
Number of extensions: 448591
Number of successful extensions: 1490
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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