Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0572
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...   316   1e-86
Z81097-15|CAB03172.1|  412|Caenorhabditis elegans Hypothetical p...    33   0.29 
Z95559-15|CAB63361.1|  917|Caenorhabditis elegans Hypothetical p...    30   2.0  
Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z78198-6|CAB01572.2|  848|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score =  316 bits (775), Expect = 1e-86
 Identities = 147/242 (60%), Positives = 179/242 (73%)
 Frame = +3

Query: 24  VTRXEVKALSALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFI 203
           V   EVKALSALMT+KCA VDVPFGGAK G+KI+PK+Y+++E+EKITRR  +E AKKGF+
Sbjct: 134 VCEDEVKALSALMTYKCAVVDVPFGGAKGGVKIDPKQYTDYEIEKITRRIAIEFAKKGFL 193

Query: 204 GPGVDVPAPDMGTGEREMSWIADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRG 383
           GPGVDVPAPDMGTGEREM WIADTYA+T+G  D +A AC+TGKPI  GGIHGRVSATGRG
Sbjct: 194 GPGVDVPAPDMGTGEREMGWIADTYAQTIGHLDRDASACITGKPIVSGGIHGRVSATGRG 253

Query: 384 VFHGLENFINEANYMSMIGTTPGWGGKTFIVQGFGNVGLHTCRYLVRAGATCIGVIEHDG 563
           V+ GLE F N+A+YM M+G   G  GKT I+QGFGNVGLHT RYL RAG+  IG+ E+D 
Sbjct: 254 VWKGLEVFTNDADYMKMVGLDTGLAGKTAIIQGFGNVGLHTHRYLHRAGSKVIGIQEYDC 313

Query: 564 SIYNPDGINPKALEDYRIXNXTVVGFPXXXXXXXXXXXXXXXXXXCTRRHSNRSLNKDNA 743
           ++YNPDGI+PK LED++  N T+  FP                         +S++K+NA
Sbjct: 314 AVYNPDGIHPKELEDWKDANGTIKNFPGAKNFDPFTELMYEKCDIFVPAACEKSIHKENA 373

Query: 744 HR 749
            R
Sbjct: 374 SR 375


>Z81097-15|CAB03172.1|  412|Caenorhabditis elegans Hypothetical
           protein K07A1.11 protein.
          Length = 412

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 25/93 (26%), Positives = 40/93 (43%)
 Frame = +3

Query: 132 EYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSWIADTYAKTVGFQDINA 311
           +Y++H  E    +F  +L  KG  G G  +   +  T E  +    D     +   DINA
Sbjct: 148 DYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSN--TREGHLLTAGDD--GMICHWDINA 203

Query: 312 HACVTGKPINQGGIHGRVSATGRGVFHGLENFI 410
           +  ++G+ + Q    G  S      FH L NF+
Sbjct: 204 NQTISGQIVPQSKFKGHSSNAEDVSFHALHNFV 236


>Z95559-15|CAB63361.1|  917|Caenorhabditis elegans Hypothetical
           protein Y41E3.11 protein.
          Length = 917

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -3

Query: 385 TPLPVAETLPWMPPWLIGLPVTQA*ALMS*KPTVFA--*VSAIQDISRSPVPMSGAGTST 212
           +PL   E    +PP  IGLPV  + A  S  PTV A   V+     S  P P+  A  ++
Sbjct: 676 SPLVREEPTIILPPVKIGLPVVVSTADDSSSPTVAAAVVVAGNNQFSFPPPPVVMAAPAS 735

Query: 211 PGPMNPFLASSRVKR 167
             P  P     ++++
Sbjct: 736 AAPQTPIQQQQKIQQ 750


>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical
           protein F52G2.2a protein.
          Length = 1319

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 540 IGVIEHDGSIYNPDGINPKALEDYRIXNXTVVGF 641
           +G++  D SIY  D    K  E  R+ N   +GF
Sbjct: 785 LGIVVADSSIYGSDNEQSKVFEFERLRNPITLGF 818


>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical
           protein F52G2.2b protein.
          Length = 1129

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 540 IGVIEHDGSIYNPDGINPKALEDYRIXNXTVVGF 641
           +G++  D SIY  D    K  E  R+ N   +GF
Sbjct: 595 LGIVVADSSIYGSDNEQSKVFEFERLRNPITLGF 628


>Z78198-6|CAB01572.2|  848|Caenorhabditis elegans Hypothetical
           protein F55C5.7 protein.
          Length = 848

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 504 TCRYLVRAGATCIGVIEHDGSIYNPDGINPKALEDYRI 617
           T +YLV+A       +  DGS++N +G+   A++D  I
Sbjct: 306 TAKYLVKAEKLYRTYLSLDGSVFNFEGLLTAAMQDPNI 343


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,839,608
Number of Sequences: 27780
Number of extensions: 341284
Number of successful extensions: 936
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)