Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0572
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.57 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.8  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           24   1.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   7.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   9.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.3  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 432 MIGTTPGWGGKTFIVQGFGNVGLHTCRYLVRAGATCIG 545
           M+ + P W  + +    +G +G+     +V AGATC+G
Sbjct: 546 MVCSAPVWRFQPWGPFTWGGIGVVVLFAVVLAGATCLG 583


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 169 VSPLNLPKKD-SLGLAWMSPLLTWVPANEK 255
           V P N+  KD S+ L W+S  + W   N K
Sbjct: 172 VVPGNMGLKDQSMALRWVSENIEWFGGNPK 201


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 169 VSPLNLPKKD-SLGLAWMSPLLTWVPANEK 255
           V P N+  KD S+ L W+S  + W   N K
Sbjct: 43  VVPGNMGLKDQSMALRWVSENIEWFGGNPK 72


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 169 VSPLNLPKKD-SLGLAWMSPLLTWVPANEK 255
           V P N+  KD S+ L W+S  + W   N K
Sbjct: 172 VVPGNMGLKDQSMALRWVSENIEWFGGNPK 201


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 384 VFHGLENFINEANYMSMIGTTPGWGG 461
           VF  L ++IN  NY + +  T  + G
Sbjct: 121 VFDDLNDYINRLNYSAFVNLTAYYDG 146


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +3

Query: 420 NY-MSMIGTTPGWGGKTFIV 476
           NY M+ +  T  WG KTF++
Sbjct: 58  NYTMNYLLDTDQWGDKTFVI 77


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/40 (22%), Positives = 14/40 (35%)
 Frame = +2

Query: 341 PGWHPRQSFSHGQGRIPRLGELHQRSQLHEHDRYNPRLGW 460
           P W  ++     + R  + G+L     L    R  P   W
Sbjct: 174 PFWDDQRVEQEAKRRFEKYGQLFMEETLKAAKRMRPAANW 213


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 562  APFTTLMASTLRPWRTTESXTVX*SGFPXAKAYEG 666
            A  T+     +RPWR + +      G P  + Y+G
Sbjct: 1314 ARITSFGGHVVRPWRGSATLACNAVGDPTREWYKG 1348


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 12/42 (28%), Positives = 15/42 (35%)
 Frame = -3

Query: 568 MEPSCSITPMQVAPARTR*RQVWSPTLPKPWTMNVLPPQPGV 443
           M P C +   Q A  R   +       P   TMN  P   G+
Sbjct: 252 MRPECVVPEYQCAVKRKEEKAQKEKDKPNSTTMNGSPGSGGI 293


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 562  APFTTLMASTLRPWRTTESXTVX*SGFPXAKAYEG 666
            A  T+     +RPWR + +      G P  + Y+G
Sbjct: 1310 ARITSFGGHVVRPWRGSATLACNAVGDPTREWYKG 1344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,724
Number of Sequences: 438
Number of extensions: 4038
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)