Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0565
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1; ...   155   8e-37
UniRef50_Q5MGF8 Cluster: Putative uncharacterized protein; n=1; ...    61   2e-08
UniRef50_UPI000051A0D1 Cluster: PREDICTED: similar to corin isof...    35   1.9  
UniRef50_A6GEX5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_Q55NL3 Cluster: Putative uncharacterized protein; n=2; ...    34   3.3  
UniRef50_Q9LJ64 Cluster: Extensin protein-like; n=8; Eukaryota|R...    34   4.3  
UniRef50_A1SEK9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_Q2GNG0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_A5E5P4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_Q2GAH4 Cluster: Zinc finger/thioredoxin putative; n=2; ...    33   9.9  
UniRef50_Q4UHK5 Cluster: SfiI-subtelomeric related protein famil...    33   9.9  

>UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 272

 Score =  155 bits (377), Expect = 8e-37
 Identities = 81/105 (77%), Positives = 81/105 (77%)
 Frame = +1

Query: 85  MKVLLLCIAFAAVXLAMPVAEEKDVVPAQPILEVAPKIDDSXXXXXXXXXXXXXXXXXXX 264
           MKVLLLCIAFAAV LAMPVAEEKDVVPAQPILEVAPKIDDS                   
Sbjct: 1   MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAATEEKKAEPAP 60

Query: 265 XSNDEVPAIPEAXKDDIAPEDSDIAKPETVPXVKTEXKVPEAKSS 399
            SNDEVPAIPEA KDDIAPEDSDIAKPETVP VKTE KVPEAKSS
Sbjct: 61  VSNDEVPAIPEAKKDDIAPEDSDIAKPETVPEVKTEEKVPEAKSS 105



 Score =  118 bits (285), Expect = 1e-25
 Identities = 62/77 (80%), Positives = 63/77 (81%)
 Frame = +2

Query: 365 KPXXKSRKQNHPEIPDAEAKSADIKVEEPAAQPEDSKTEXQATVAEISKEEXPSATDAEG 544
           K   K  +    EIPDAEAKSADIKVEEPAAQPEDSKTE QATVAEISKEE PSATDAEG
Sbjct: 94  KTEEKVPEAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEG 153

Query: 545 SADSXAIIXNMVXKIDL 595
           SADS AII NMV KIDL
Sbjct: 154 SADSAAIIPNMVKKIDL 170


>UniRef50_Q5MGF8 Cluster: Putative uncharacterized protein; n=1;
           Lonomia obliqua|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 206

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 44/113 (38%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
 Frame = +1

Query: 82  KMKVLLLCIAFAAVXLAMPVAEEKDVVPAQPI-------LEVAPKIDDSXXXXXXXXXXX 240
           +MKVLLLC+AFAAV +AMPVAEEK  V   P+       +   P+ D             
Sbjct: 18  RMKVLLLCMAFAAVSMAMPVAEEKPEVAEVPVPVAETKAVNTEPQPDVKTISTDEKKTET 77

Query: 241 XXXXXXXXXSNDEVPAIPEAXKDDIAPEDSDIAKPETVPXVKTEXKVPEAKSS 399
                       EV + P A  +   PE+    KPE VP VKTE K PE+KS+
Sbjct: 78  SPEIKSDKTPEPEVKSAP-AEAEAKQPEE---PKPEPVPEVKTEDKAPESKSA 126


>UniRef50_UPI000051A0D1 Cluster: PREDICTED: similar to corin isoform
           1; n=1; Apis mellifera|Rep: PREDICTED: similar to corin
           isoform 1 - Apis mellifera
          Length = 2733

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 27/78 (34%), Positives = 36/78 (46%)
 Frame = +2

Query: 320 QKTPISRNRKPFLX*KPXXKSRKQNHPEIPDAEAKSADIKVEEPAAQPEDSKTEXQATVA 499
           QK  I  N K F   +P  +      PE P AE + +     EP+A+PE S     +   
Sbjct: 622 QKPEIESNSKSFAEPEPSAEPEPSAEPE-PSAEPEPS--AEPEPSAEPEPSAEPEPSAEP 678

Query: 500 EISKEEXPSATDAEGSAD 553
           E S E  PSA + E SA+
Sbjct: 679 EPSSEPEPSA-EPEPSAE 695


>UniRef50_A6GEX5 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 545

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 407 PDAEAKSADIKVEEPAAQPEDSKTEXQAT-VAEISKEEXPSATDAEGSADS 556
           PD E  S D +  E     EDS     +T  A+ + EE  S  ++EGS DS
Sbjct: 57  PDEEGSSTDAEGSEDETSSEDSSDSTDSTDSADSTDEESSSGAESEGSEDS 107


>UniRef50_Q55NL3 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 998

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 317 PQKTPISRNRKPF-LX*KPXXKSRKQNHPEIPDAEAKSADIKVEEPAAQPEDSKTE 481
           PQ++ ++   +P      P  KS  +  PE+PD E    ++ V  PA  P  SK E
Sbjct: 832 PQQSAVAAFNEPSDAPETPIDKSMLKYFPEVPDEEKPRVEVHVSSPAVTPAKSKKE 887


>UniRef50_Q9LJ64 Cluster: Extensin protein-like; n=8; Eukaryota|Rep:
           Extensin protein-like - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 956

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +2

Query: 317 PQKTPISRNRKPFLX*KPXXKSRKQNHPEIPDAEAKSADIKVEEP---AAQPEDSKTEXQ 487
           P   P + + +P    +P  +S KQ  P+    + K    K E P   A +PE  K + +
Sbjct: 446 PSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPE 505

Query: 488 ATVAEISKEEXPSATDA 538
           +   E SK+E P   ++
Sbjct: 506 SPKQESSKQEPPKPEES 522


>UniRef50_A1SEK9 Cluster: Putative uncharacterized protein; n=1;
           Nocardioides sp. JS614|Rep: Putative uncharacterized
           protein - Nocardioides sp. (strain BAA-499 / JS614)
          Length = 326

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 323 KTPISRNRKPFLX*KPXXKSRKQNHPEIPDAEAKSADIKVEEPA-AQPEDSKTEXQATVA 499
           K P+ R  +P     P   +  +   E P+AEA+ A++   EPA A+P D   E     A
Sbjct: 56  KPPLRRVPEPV----PAPITEPEPRGEEPEAEAEVAEVAETEPADAEPTDESAEAVEVAA 111

Query: 500 EISKEEXPSATDAE 541
               E  P A   E
Sbjct: 112 AAEPEPEPDAETTE 125


>UniRef50_Q2GNG0 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 1290

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +2

Query: 380 SRKQNHPEIPDAE-AKSADIKVEEPAAQPEDSKTEXQATVAEISKEEXPSATD 535
           + +Q  PEI + E  ++A+  V+EP+A PED +TE +AT  E S     + TD
Sbjct: 84  TEEQPEPEITEQEDVQTAEPPVDEPSA-PEDEETE-RATATEESSATAETETD 134


>UniRef50_A5E5P4 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 718

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +2

Query: 341 NRKPFLX*KPXXKSRKQNHPEIPDAEAKSADIKVEEPAAQPE-DSKTEXQATVAEISKEE 517
           N   F   K     +K+      ++E KS  +KV +    PE +SK+  Q T   ISK+ 
Sbjct: 116 NDNVFQTRKRDLSKKKRKRTNDFESETKSPKVKVAKTHKSPEPNSKSSSQNTSQIISKQR 175

Query: 518 XPSATDAEGSADSXAIIXNMVXKIDL 595
            P+ +  E S DS     +++ K DL
Sbjct: 176 SPNKSIFEDS-DSEIFEYSVITKDDL 200


>UniRef50_Q2GAH4 Cluster: Zinc finger/thioredoxin putative; n=2;
           Sphingomonadales|Rep: Zinc finger/thioredoxin putative -
           Novosphingobium aromaticivorans (strain DSM 12444)
          Length = 294

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = +2

Query: 389 QNHPEIPDAEAKSADIKVEEPAAQPEDSKTE-XQATVAE--ISKEEXPSATDAEGSADSX 559
           QN PE+P   A++A +    PAAQP DS  +  QA VAE   +    PS  + E +A   
Sbjct: 37  QNGPELP-PRAEAAPLADVPPAAQPADSGAQTVQAAVAEPAPAPASSPSPREPEPAAPIR 95

Query: 560 AI 565
           A+
Sbjct: 96  AV 97


>UniRef50_Q4UHK5 Cluster: SfiI-subtelomeric related protein family
            member, putative; n=1; Theileria annulata|Rep:
            SfiI-subtelomeric related protein family member, putative
            - Theileria annulata
          Length = 2845

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = +2

Query: 365  KPXXKSRKQNHPEIPDAEAKSADIKVEEPAAQPEDSKTEXQATVAEISKEEXPSATDAEG 544
            KP   ++ ++  E  D      + K  EPA QPE   TE  +T  E   EE   +T  E 
Sbjct: 2714 KPEQDTQAEDSTEAEDPTQPETEDKEPEPAIQPE---TEQDSTQTEQQPEESKDSTTGES 2770

Query: 545  SA 550
            S+
Sbjct: 2771 SS 2772


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,219,195
Number of Sequences: 1657284
Number of extensions: 6416866
Number of successful extensions: 19896
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19719
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)