Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0560
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.8  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   5.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.8  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 291 SVATTKAETSDGHLSA 338
           S A T AET+DG L+A
Sbjct: 149 SYALTVAETADGRLNA 164


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 130 DCKEEYNQSXNGTENFRVH 186
           DC + ++Q+ N T + R H
Sbjct: 26  DCNKSFSQAANLTAHVRTH 44


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 130 DCKEEYNQSXNGTENFRVH 186
           DC + ++Q+ N T + R H
Sbjct: 282 DCNKSFSQAANLTAHVRTH 300


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = -1

Query: 548 LFXRIRGSNKLASIDFSLCGRFCLFTDASLLCGVSDFMXTSL 423
           +F  +  +++ +    S    FC F  A + C V+ F  + L
Sbjct: 22  IFCLVNFNHRESYFRLSKAKSFCTFVAALVYCSVTFFALSEL 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,457
Number of Sequences: 336
Number of extensions: 2080
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)