BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0559 (700 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced ... 26 1.3 AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 25 3.0 DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 4.0 AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 5.3 AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 24 5.3 AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 24 5.3 AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 23 9.2 AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 9.2 >AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced homeotic protein protein. Length = 372 Score = 25.8 bits (54), Expect = 1.3 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -3 Query: 260 RSSK-GFPSTTVTFFSSNAGVSMYVRRSLVALVLATPK 150 RS K G PST V+ S+N S R+ V L LA+P+ Sbjct: 189 RSLKSGNPSTAVSSSSTNNNTSNISNRNQVNLPLASPE 226 >AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein protein. Length = 724 Score = 24.6 bits (51), Expect = 3.0 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +1 Query: 622 PKLVQGRXKRGQHLQGSHNPPQQVLW 699 P+L Q + ++ Q Q PQQ+LW Sbjct: 395 PRLQQQQQQQQQSQQQQQQQPQQLLW 420 >DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. Length = 889 Score = 24.2 bits (50), Expect = 4.0 Identities = 13/49 (26%), Positives = 23/49 (46%) Frame = +1 Query: 226 VTVVEGKPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDRRATYSPE 372 VT++ P + P+P P P I +++ G +E ++RA E Sbjct: 626 VTILVPYPIIIPLPLPIPVPIPVIDFLKAALPKGESEKADEKRAEQKDE 674 >AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein protein. Length = 1645 Score = 23.8 bits (49), Expect = 5.3 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +2 Query: 611 PLAHPSWSKDGVNVDNTYKDRI 676 P SW+ + V V NT DR+ Sbjct: 1381 PRGRHSWASNSVEVPNTCSDRL 1402 >AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase protein. Length = 1209 Score = 23.8 bits (49), Expect = 5.3 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 4/25 (16%) Frame = -1 Query: 475 LRAHPRRRQEKRPC----RPAWFYR 413 LR +P+ E RPC +PAW R Sbjct: 285 LRTYPQGDSEGRPCSKAEKPAWMRR 309 >AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase protein. Length = 1201 Score = 23.8 bits (49), Expect = 5.3 Identities = 11/39 (28%), Positives = 17/39 (43%) Frame = +3 Query: 405 RCQR*NQAGLHGLFSCRRRGCARSHVLHHASDSRLGAHV 521 RC ++ H +F C R R+ +LH L H+ Sbjct: 1018 RCPGVAESAEHAMFECPRFDSTRTELLHGVVPETLLEHM 1056 >AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A protein. Length = 753 Score = 23.0 bits (47), Expect = 9.2 Identities = 9/37 (24%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = +1 Query: 481 YYITQVTPASEP-TYGELIPQYLSDHVVAKVGDLTYL 588 +Y+ + +P TY + DHV++ + +++YL Sbjct: 540 FYLYRPEELFQPNTYNRFLVAPTGDHVISLIDEISYL 576 >AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule binding protein protein. Length = 838 Score = 23.0 bits (47), Expect = 9.2 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 Query: 241 GKPFELRCPVPGGYPKPTIS 300 G+P +R P P G P+P IS Sbjct: 261 GQPPPIRPPNPMGGPRPQIS 280 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.315 0.133 0.404 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 754,929 Number of Sequences: 2352 Number of extensions: 16573 Number of successful extensions: 23 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 23 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 71086350 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits)
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