Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0559
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 45 6e-07
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 45 6e-07
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 40 2e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.69
U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor... 25 0.91
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.91
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 3.7
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 4.9
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 4.9
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 6.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 6.4
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 22 6.4
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 21 8.5
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 21 8.5
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 21 8.5
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 45.2 bits (102), Expect = 6e-07
Identities = 47/150 (31%), Positives = 59/150 (39%), Gaps = 7/150 (4%)
Frame = +1
Query: 13 EYSWRKDGM------HFSVGQDTLTTIDAGSLV-FSQTKASDEGEYQCFAKSDFGVASTR 171
+ +W DG F +GQ D S V S D GEY C A++ G T
Sbjct: 452 QVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAGKV-TH 510
Query: 172 ATKLRRTYIETPAFEEKKVTVVEGKPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDR 351
A +L Y KVT V G+ L+CPV GYP I W R + E D
Sbjct: 511 AARLN-VYGLPYIRLIPKVTAVAGETLRLKCPV-AGYPIEEIKWERANRELPD-----DL 563
Query: 352 RATYSPEGTLYFSNASLDDANDKTKLVCMA 441
R P+GTL + S+ D C A
Sbjct: 564 RQKVLPDGTLVIT--SVQKKGDAGVYTCSA 591
Score = 44.0 bits (99), Expect = 1e-06
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Frame = +1
Query: 28 KDGMHFSVGQDTLTTI-DAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIET 204
K G + + + T I G+L+ K EG Y C A + G + +L+
Sbjct: 750 KSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPY 809
Query: 205 PAFEEKKVTVVEGKPFELRCPVPGGYPKPTISWMR--HHDEDGSTENFMDRRATYSPEGT 378
A + VTV +G L C V G P T++W++ + + ST + + +P+G
Sbjct: 810 FAAPSRLVTVKKGDTATLHCEVHGDTP-VTVTWLKGGKIELNPSTNYRVTVKREVTPDGV 868
Query: 379 LYFSNASLDDANDKTKLVCMASS 447
+ S +A+D C AS+
Sbjct: 869 IAQLQISSAEASDSGAYFCQASN 891
Score = 32.7 bits (71), Expect = 0.003
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Frame = +1
Query: 82 GSLVFSQT-KASDEGEYQCFAKSDFGVASTRATKLR---RTYIETPAFEEKKVTVVEGKP 249
G+LV + K D G Y C A++ G ++ R+ + IE F+E + EG
Sbjct: 571 GTLVITSVQKKGDAGVYTCSARNKQGHSARRSGDVAVIVPPIIEPFTFQEG---LSEGMR 627
Query: 250 FELRCPVPGGYPKPTISWMRHHDED-GSTENFMDRR-ATYSPEGTLY-FSNASLDDANDK 420
C V G P TISW++ N + P +L +N + + + D
Sbjct: 628 TRTVCGVAAGDPPLTISWLKDGQSPFPLPPNLASANISQLDPYSSLLSITNLAAEHSGDY 687
Query: 421 TKLVCMASSPAAD 459
T C+A++PAA+
Sbjct: 688 T---CVAANPAAE 697
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 88 LVFSQTKASDEGEYQCFAKSDFG 156
L S +ASD G Y C A + +G
Sbjct: 872 LQISSAEASDSGAYFCQASNLYG 894
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 45.2 bits (102), Expect = 6e-07
Identities = 47/150 (31%), Positives = 59/150 (39%), Gaps = 7/150 (4%)
Frame = +1
Query: 13 EYSWRKDGM------HFSVGQDTLTTIDAGSLV-FSQTKASDEGEYQCFAKSDFGVASTR 171
+ +W DG F +GQ D S V S D GEY C A++ G T
Sbjct: 452 QVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAGKV-TH 510
Query: 172 ATKLRRTYIETPAFEEKKVTVVEGKPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDR 351
A +L Y KVT V G+ L+CPV GYP I W R + E D
Sbjct: 511 AARLN-VYGLPYIRLIPKVTAVAGETLRLKCPV-AGYPIEEIKWERANRELPD-----DL 563
Query: 352 RATYSPEGTLYFSNASLDDANDKTKLVCMA 441
R P+GTL + S+ D C A
Sbjct: 564 RQKVLPDGTLVIT--SVQKKGDAGVYTCSA 591
Score = 44.0 bits (99), Expect = 1e-06
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Frame = +1
Query: 28 KDGMHFSVGQDTLTTI-DAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIET 204
K G + + + T I G+L+ K EG Y C A + G + +L+
Sbjct: 746 KSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPY 805
Query: 205 PAFEEKKVTVVEGKPFELRCPVPGGYPKPTISWMR--HHDEDGSTENFMDRRATYSPEGT 378
A + VTV +G L C V G P T++W++ + + ST + + +P+G
Sbjct: 806 FAAPSRLVTVKKGDTATLHCEVHGDTP-VTVTWLKGGKIELNPSTNYRVTVKREVTPDGV 864
Query: 379 LYFSNASLDDANDKTKLVCMASS 447
+ S +A+D C AS+
Sbjct: 865 IAQLQISSAEASDSGAYFCQASN 887
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 88 LVFSQTKASDEGEYQCFAKSDFG 156
L S +ASD G Y C A + +G
Sbjct: 868 LQISSAEASDSGAYFCQASNLYG 890
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 39.9 bits (89), Expect = 2e-05
Identities = 37/145 (25%), Positives = 52/145 (35%), Gaps = 2/145 (1%)
Frame = +1
Query: 19 SWRKDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYI 198
SW KDG + + L K D+G YQCF ++D A A
Sbjct: 340 SWLKDGKPLGLEEAVLR--------IESVKKEDKGMYQCFVRNDQESAQATAELKLGGRF 391
Query: 199 ETPAFEE--KKVTVVEGKPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDRRATYSPE 372
E P + + T+ G L+C V G P P I+W +TE +
Sbjct: 392 EPPQIRQAFAEETLQPGPSMFLKC-VASGNPTPEITWELDGKRLSNTERLQVGQYVTVNG 450
Query: 373 GTLYFSNASLDDANDKTKLVCMASS 447
+ N S ND C+A+S
Sbjct: 451 DVVSHLNISSTHTNDGGLYKCIAAS 475
Score = 37.9 bits (84), Expect = 9e-05
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +1
Query: 79 AGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFEL 258
+G+L+ + + D G+Y C + G S T L T E T+ G+P
Sbjct: 269 SGTLIIREARVEDSGKYLCIVNNSVGGESVE-TVLTVTAPLGAEIEPSTQTIDFGRPATF 327
Query: 259 RCPVPGGYPKPTISWMR 309
C V G P T+SW++
Sbjct: 328 TCNVRGN-PIKTVSWLK 343
Score = 33.9 bits (74), Expect = 0.001
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 13 EYSWRKDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFG 156
E +W+ G D L + GSL + +D GEY C+ ++ FG
Sbjct: 1307 EVTWKVRGAVLQ-SSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFG 1353
Score = 33.1 bits (72), Expect = 0.003
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +1
Query: 88 LVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCP 267
L+ S A GEY C A++ G AS +T L E +G + C
Sbjct: 643 LMISVITARHAGEYVCTAENAAGTAS-HSTTLTVNVPPRWILEPTDKAFAQGSDARVECK 701
Query: 268 VPGGYPKPTISWMR 309
G +PKP ++W +
Sbjct: 702 ADG-FPKPQVTWKK 714
Score = 31.1 bits (67), Expect = 0.011
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 2/128 (1%)
Frame = +1
Query: 70 TIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEK--KVTVVEG 243
+++ G+L + + ++EG Y C A + G + + + P FE K T G
Sbjct: 734 SVEDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFI--SVQAPPHFEIKLKNQTARRG 791
Query: 244 KPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDRRATYSPEGTLYFSNASLDDANDKT 423
+P L+C G P + M + D +++ R G L + + +D
Sbjct: 792 EPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEILANGVLSDLSIKRTERSDSA 851
Query: 424 KLVCMASS 447
C+A++
Sbjct: 852 LFTCVATN 859
Score = 29.5 bits (63), Expect = 0.032
Identities = 21/112 (18%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Frame = +1
Query: 22 WRKDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIE 201
W +D + + + ++ + + SD+ Y C A++ G ++ +++
Sbjct: 524 WERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVPP 583
Query: 202 T-PAFEEKKVTVVEGKPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDRR 354
T F K+ + G+ L+C VP G I W +E G + + ++
Sbjct: 584 TIQQFSFTKLPMNAGEFANLQCIVPTGDLPLNIRWSYPGEEMGGSSGVLAKK 635
Score = 25.8 bits (54), Expect = 0.40
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 1/109 (0%)
Frame = +1
Query: 28 KDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETP 207
K +++ ++ L L +T+ SD + C A + FG T + + E P
Sbjct: 820 KSDSRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVP 879
Query: 208 AFEEKKVTVVEGKPFELRCPVPGGYPKPTISW-MRHHDEDGSTENFMDR 351
KV G+ +L P P + + + GS E +DR
Sbjct: 880 --YGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDIDR 926
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.69
Identities = 15/63 (23%), Positives = 22/63 (34%)
Frame = +1
Query: 10 VEYSWRKDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRR 189
++ SWR DG +D Q + ++G Y C K D RA
Sbjct: 248 IKVSWRADGQIMVDYEDEFDEFGDSKCSLCQRRFEEQGNYSCL-KVDLIFTRDRAFYFTT 306
Query: 190 TYI 198
+I
Sbjct: 307 VFI 309
>U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor
protein.
Length = 129
Score = 24.6 bits (51), Expect = 0.91
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 312 MSHPAYGRLRVAPGHWTAEFKGFSF 238
M+ AYG L + PG + + GF F
Sbjct: 70 MTGDAYGGLNIRPGQPSRQHAGFEF 94
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 24.6 bits (51), Expect = 0.91
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 550 DHVVAKVGDLTYLYCIYGGTXLSPPKLVQGRXKRGQHLQGSHNPPQQV 693
+H+ A+VGD + C GT PP LV R G L+ + P +V
Sbjct: 318 NHISARVGDNVEIKCDVTGT--PPPPLVWRR--NGADLETLNEPEIRV 361
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 3.7
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 339 VLSGTVLVMMSHPAYGRLRVAPGHWTAEFKGFSFDHR 229
V S M S P + V PG A F+GF + HR
Sbjct: 952 VRSAPNFYMPSEPKAPMILVGPGTGIAPFRGF-WHHR 987
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 49 VGQDTLTTIDAGSLVFSQT 105
VG+ L T+DAG +F T
Sbjct: 160 VGEHLLMTVDAGDSMFVHT 178
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 616 SPPKLVQGRXKRGQHLQGSHNPPQQ 690
SPP LV+ + H Q H PQQ
Sbjct: 160 SPP-LVESQMHHQMHTQHPHMQPQQ 183
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 84 ASVDSGERVLTDAKMHAVFSPR 19
A++DSG + D K H ++S +
Sbjct: 336 AAIDSGYILNNDGKWHNIYSEK 357
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 84 ASVDSGERVLTDAKMHAVFSPR 19
A++DSG + D K H ++S +
Sbjct: 336 AAIDSGYILNNDGKWHNIYSEK 357
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 21.8 bits (44), Expect = 6.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +1
Query: 277 GYPKPTISWMR 309
G+P+P I+W++
Sbjct: 48 GFPRPEITWLK 58
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 577 LTYLYCIYGGTXLSPP 624
+T++ ++G T L PP
Sbjct: 10 VTFVVAVFGNTNLDPP 25
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 577 LTYLYCIYGGTXLSPP 624
+T++ ++G T L PP
Sbjct: 11 VTFVVAVFGNTNLDPP 26
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 577 LTYLYCIYGGTXLSPP 624
+T++ ++G T L PP
Sbjct: 11 VTFVVAVFGNTNLDPP 26
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.133 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,843
Number of Sequences: 438
Number of extensions: 4626
Number of successful extensions: 31
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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