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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0559
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    45   6e-07
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    45   6e-07
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              40   2e-05
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    25   0.69 
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    25   0.91 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.91 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.7  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   4.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   4.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.4  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            22   6.4  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   8.5  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   8.5  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   8.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 45.2 bits (102), Expect = 6e-07
 Identities = 47/150 (31%), Positives = 59/150 (39%), Gaps = 7/150 (4%)
 Frame = +1

Query: 13  EYSWRKDGM------HFSVGQDTLTTIDAGSLV-FSQTKASDEGEYQCFAKSDFGVASTR 171
           + +W  DG        F +GQ      D  S V  S     D GEY C A++  G   T 
Sbjct: 452 QVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAGKV-TH 510

Query: 172 ATKLRRTYIETPAFEEKKVTVVEGKPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDR 351
           A +L   Y         KVT V G+   L+CPV  GYP   I W R + E        D 
Sbjct: 511 AARLN-VYGLPYIRLIPKVTAVAGETLRLKCPV-AGYPIEEIKWERANRELPD-----DL 563

Query: 352 RATYSPEGTLYFSNASLDDANDKTKLVCMA 441
           R    P+GTL  +  S+    D     C A
Sbjct: 564 RQKVLPDGTLVIT--SVQKKGDAGVYTCSA 591



 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
 Frame = +1

Query: 28   KDGMHFSVGQDTLTTI-DAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIET 204
            K G +  + +   T I   G+L+    K   EG Y C A +  G    +  +L+      
Sbjct: 750  KSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPY 809

Query: 205  PAFEEKKVTVVEGKPFELRCPVPGGYPKPTISWMR--HHDEDGSTENFMDRRATYSPEGT 378
             A   + VTV +G    L C V G  P  T++W++    + + ST   +  +   +P+G 
Sbjct: 810  FAAPSRLVTVKKGDTATLHCEVHGDTP-VTVTWLKGGKIELNPSTNYRVTVKREVTPDGV 868

Query: 379  LYFSNASLDDANDKTKLVCMASS 447
            +     S  +A+D     C AS+
Sbjct: 869  IAQLQISSAEASDSGAYFCQASN 891



 Score = 32.7 bits (71), Expect = 0.003
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
 Frame = +1

Query: 82  GSLVFSQT-KASDEGEYQCFAKSDFGVASTRATKLR---RTYIETPAFEEKKVTVVEGKP 249
           G+LV +   K  D G Y C A++  G ++ R+  +       IE   F+E    + EG  
Sbjct: 571 GTLVITSVQKKGDAGVYTCSARNKQGHSARRSGDVAVIVPPIIEPFTFQEG---LSEGMR 627

Query: 250 FELRCPVPGGYPKPTISWMRHHDED-GSTENFMDRR-ATYSPEGTLY-FSNASLDDANDK 420
               C V  G P  TISW++          N      +   P  +L   +N + + + D 
Sbjct: 628 TRTVCGVAAGDPPLTISWLKDGQSPFPLPPNLASANISQLDPYSSLLSITNLAAEHSGDY 687

Query: 421 TKLVCMASSPAAD 459
           T   C+A++PAA+
Sbjct: 688 T---CVAANPAAE 697



 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 88  LVFSQTKASDEGEYQCFAKSDFG 156
           L  S  +ASD G Y C A + +G
Sbjct: 872 LQISSAEASDSGAYFCQASNLYG 894


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 45.2 bits (102), Expect = 6e-07
 Identities = 47/150 (31%), Positives = 59/150 (39%), Gaps = 7/150 (4%)
 Frame = +1

Query: 13  EYSWRKDGM------HFSVGQDTLTTIDAGSLV-FSQTKASDEGEYQCFAKSDFGVASTR 171
           + +W  DG        F +GQ      D  S V  S     D GEY C A++  G   T 
Sbjct: 452 QVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAGKV-TH 510

Query: 172 ATKLRRTYIETPAFEEKKVTVVEGKPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDR 351
           A +L   Y         KVT V G+   L+CPV  GYP   I W R + E        D 
Sbjct: 511 AARLN-VYGLPYIRLIPKVTAVAGETLRLKCPV-AGYPIEEIKWERANRELPD-----DL 563

Query: 352 RATYSPEGTLYFSNASLDDANDKTKLVCMA 441
           R    P+GTL  +  S+    D     C A
Sbjct: 564 RQKVLPDGTLVIT--SVQKKGDAGVYTCSA 591



 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
 Frame = +1

Query: 28   KDGMHFSVGQDTLTTI-DAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIET 204
            K G +  + +   T I   G+L+    K   EG Y C A +  G    +  +L+      
Sbjct: 746  KSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPY 805

Query: 205  PAFEEKKVTVVEGKPFELRCPVPGGYPKPTISWMR--HHDEDGSTENFMDRRATYSPEGT 378
             A   + VTV +G    L C V G  P  T++W++    + + ST   +  +   +P+G 
Sbjct: 806  FAAPSRLVTVKKGDTATLHCEVHGDTP-VTVTWLKGGKIELNPSTNYRVTVKREVTPDGV 864

Query: 379  LYFSNASLDDANDKTKLVCMASS 447
            +     S  +A+D     C AS+
Sbjct: 865  IAQLQISSAEASDSGAYFCQASN 887



 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 88  LVFSQTKASDEGEYQCFAKSDFG 156
           L  S  +ASD G Y C A + +G
Sbjct: 868 LQISSAEASDSGAYFCQASNLYG 890


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 39.9 bits (89), Expect = 2e-05
 Identities = 37/145 (25%), Positives = 52/145 (35%), Gaps = 2/145 (1%)
 Frame = +1

Query: 19  SWRKDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYI 198
           SW KDG    + +  L             K  D+G YQCF ++D   A   A        
Sbjct: 340 SWLKDGKPLGLEEAVLR--------IESVKKEDKGMYQCFVRNDQESAQATAELKLGGRF 391

Query: 199 ETPAFEE--KKVTVVEGKPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDRRATYSPE 372
           E P   +   + T+  G    L+C V  G P P I+W        +TE     +      
Sbjct: 392 EPPQIRQAFAEETLQPGPSMFLKC-VASGNPTPEITWELDGKRLSNTERLQVGQYVTVNG 450

Query: 373 GTLYFSNASLDDANDKTKLVCMASS 447
             +   N S    ND     C+A+S
Sbjct: 451 DVVSHLNISSTHTNDGGLYKCIAAS 475



 Score = 37.9 bits (84), Expect = 9e-05
 Identities = 22/77 (28%), Positives = 34/77 (44%)
 Frame = +1

Query: 79  AGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFEL 258
           +G+L+  + +  D G+Y C   +  G  S   T L  T       E    T+  G+P   
Sbjct: 269 SGTLIIREARVEDSGKYLCIVNNSVGGESVE-TVLTVTAPLGAEIEPSTQTIDFGRPATF 327

Query: 259 RCPVPGGYPKPTISWMR 309
            C V G  P  T+SW++
Sbjct: 328 TCNVRGN-PIKTVSWLK 343



 Score = 33.9 bits (74), Expect = 0.001
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 13   EYSWRKDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFG 156
            E +W+  G       D L  +  GSL   +   +D GEY C+ ++ FG
Sbjct: 1307 EVTWKVRGAVLQ-SSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFG 1353



 Score = 33.1 bits (72), Expect = 0.003
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = +1

Query: 88  LVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCP 267
           L+ S   A   GEY C A++  G AS  +T L          E       +G    + C 
Sbjct: 643 LMISVITARHAGEYVCTAENAAGTAS-HSTTLTVNVPPRWILEPTDKAFAQGSDARVECK 701

Query: 268 VPGGYPKPTISWMR 309
             G +PKP ++W +
Sbjct: 702 ADG-FPKPQVTWKK 714



 Score = 31.1 bits (67), Expect = 0.011
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 2/128 (1%)
 Frame = +1

Query: 70   TIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFEEK--KVTVVEG 243
            +++ G+L  +  + ++EG Y C A +  G   +    +  +    P FE K    T   G
Sbjct: 734  SVEDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFI--SVQAPPHFEIKLKNQTARRG 791

Query: 244  KPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDRRATYSPEGTLYFSNASLDDANDKT 423
            +P  L+C   G  P   +  M +   D  +++    R      G L   +    + +D  
Sbjct: 792  EPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEILANGVLSDLSIKRTERSDSA 851

Query: 424  KLVCMASS 447
               C+A++
Sbjct: 852  LFTCVATN 859



 Score = 29.5 bits (63), Expect = 0.032
 Identities = 21/112 (18%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
 Frame = +1

Query: 22  WRKDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIE 201
           W +D     + +      +   ++ +  + SD+  Y C A++  G ++    +++     
Sbjct: 524 WERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVPP 583

Query: 202 T-PAFEEKKVTVVEGKPFELRCPVPGGYPKPTISWMRHHDEDGSTENFMDRR 354
           T   F   K+ +  G+   L+C VP G     I W    +E G +   + ++
Sbjct: 584 TIQQFSFTKLPMNAGEFANLQCIVPTGDLPLNIRWSYPGEEMGGSSGVLAKK 635



 Score = 25.8 bits (54), Expect = 0.40
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 1/109 (0%)
 Frame = +1

Query: 28   KDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETP 207
            K    +++ ++ L       L   +T+ SD   + C A + FG   T    + +   E P
Sbjct: 820  KSDSRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVP 879

Query: 208  AFEEKKVTVVEGKPFELRCPVPGGYPKPTISW-MRHHDEDGSTENFMDR 351
                 KV    G+  +L    P     P   + + +    GS E  +DR
Sbjct: 880  --YGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDIDR 926


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 15/63 (23%), Positives = 22/63 (34%)
 Frame = +1

Query: 10  VEYSWRKDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRR 189
           ++ SWR DG      +D             Q +  ++G Y C  K D      RA     
Sbjct: 248 IKVSWRADGQIMVDYEDEFDEFGDSKCSLCQRRFEEQGNYSCL-KVDLIFTRDRAFYFTT 306

Query: 190 TYI 198
            +I
Sbjct: 307 VFI 309


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 312 MSHPAYGRLRVAPGHWTAEFKGFSF 238
           M+  AYG L + PG  + +  GF F
Sbjct: 70  MTGDAYGGLNIRPGQPSRQHAGFEF 94


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 550 DHVVAKVGDLTYLYCIYGGTXLSPPKLVQGRXKRGQHLQGSHNPPQQV 693
           +H+ A+VGD   + C   GT   PP LV  R   G  L+  + P  +V
Sbjct: 318 NHISARVGDNVEIKCDVTGT--PPPPLVWRR--NGADLETLNEPEIRV 361


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -2

Query: 339  VLSGTVLVMMSHPAYGRLRVAPGHWTAEFKGFSFDHR 229
            V S     M S P    + V PG   A F+GF + HR
Sbjct: 952  VRSAPNFYMPSEPKAPMILVGPGTGIAPFRGF-WHHR 987


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 49  VGQDTLTTIDAGSLVFSQT 105
           VG+  L T+DAG  +F  T
Sbjct: 160 VGEHLLMTVDAGDSMFVHT 178


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 616 SPPKLVQGRXKRGQHLQGSHNPPQQ 690
           SPP LV+ +     H Q  H  PQQ
Sbjct: 160 SPP-LVESQMHHQMHTQHPHMQPQQ 183


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 84  ASVDSGERVLTDAKMHAVFSPR 19
           A++DSG  +  D K H ++S +
Sbjct: 336 AAIDSGYILNNDGKWHNIYSEK 357


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 84  ASVDSGERVLTDAKMHAVFSPR 19
           A++DSG  +  D K H ++S +
Sbjct: 336 AAIDSGYILNNDGKWHNIYSEK 357


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +1

Query: 277 GYPKPTISWMR 309
           G+P+P I+W++
Sbjct: 48  GFPRPEITWLK 58


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 577 LTYLYCIYGGTXLSPP 624
           +T++  ++G T L PP
Sbjct: 10  VTFVVAVFGNTNLDPP 25


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 577 LTYLYCIYGGTXLSPP 624
           +T++  ++G T L PP
Sbjct: 11  VTFVVAVFGNTNLDPP 26


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 577 LTYLYCIYGGTXLSPP 624
           +T++  ++G T L PP
Sbjct: 11  VTFVVAVFGNTNLDPP 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.133    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,843
Number of Sequences: 438
Number of extensions: 4626
Number of successful extensions: 31
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)

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