Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0555
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   2.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.5  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.3  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 343 VFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGE 438
           V D    +  +F+A W G   +  P+Y  + E
Sbjct: 193 VLDIINVMTYDFHAMWAGFTAENSPLYGGVNE 224


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 14/68 (20%), Positives = 28/68 (41%)
 Frame = +1

Query: 82  DEYEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQSFFDGTLKQ 261
           ++YE   + + F    D VPS        D+  +     +L P   E++  +   G+++ 
Sbjct: 622 EDYEMPPVPKDFPQCGDYVPSGNSTVDCDDVGTFGAILKKLLPKVYEDYCPTSNSGSVRM 681

Query: 262 HLLSEDLP 285
             L   +P
Sbjct: 682 SHLGTLVP 689


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 375 FDEDLLSCVEDDFVKVGGDEHFDGFG 298
           FDE L  C+++ ++ +     F  FG
Sbjct: 148 FDELLFKCMKEKWIPLCNSVTFSNFG 173


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 375 FDEDLLSCVEDDFVKVGGDEHFDGFG 298
           FDE L  C+++ ++ +     F  FG
Sbjct: 381 FDELLFKCMKEKWIPLCNSVTFSNFG 406


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 375 FDEDLLSCVEDDFVKVGGDEHFDGFG 298
           FDE L  C+++ ++ +     F  FG
Sbjct: 381 FDELLFKCMKEKWIPLCNSVTFSNFG 406


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +1

Query: 343 VFDTTKKVLVEFYAPWCGHCKQLVPIY 423
           V D    +  +F+  W G   Q  P+Y
Sbjct: 192 VLDVINVMTYDFHGSWAGVTAQNSPLY 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,146
Number of Sequences: 336
Number of extensions: 2299
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)