Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0555
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 213 9e-56
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 2e-27
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 118 5e-27
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 93 1e-19
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 68 8e-12
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 61 1e-09
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 58 5e-09
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 57 1e-08
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 56 4e-08
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 55 5e-08
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 50 2e-06
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 49 4e-06
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 47 1e-05
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 46 4e-05
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 38 0.008
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 32 0.39
SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30) 31 0.68
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 30 2.1
SB_52484| Best HMM Match : AbfB (HMM E-Value=0.011) 29 4.8
SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 28 6.3
SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 6.3
SB_41762| Best HMM Match : Tom22 (HMM E-Value=5.3) 28 6.3
SB_35972| Best HMM Match : DUF1379 (HMM E-Value=5.5) 28 6.3
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 6.3
SB_20221| Best HMM Match : RVT_1 (HMM E-Value=0.00045) 28 6.3
SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5) 28 6.3
SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 6.3
SB_54171| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_48899| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_36000| Best HMM Match : DUF1379 (HMM E-Value=4.8) 28 6.3
SB_32624| Best HMM Match : rve (HMM E-Value=0.00042) 28 6.3
SB_23778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18) 28 6.3
SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068) 28 6.3
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_1704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 213 bits (521), Expect = 9e-56
Identities = 92/181 (50%), Positives = 134/181 (74%), Gaps = 1/181 (0%)
Frame = +1
Query: 37 AKTYRDRIMTVAIDADEYEHQRILEFFGMKKDEVPSARLIAL-EQDMAKYKPSSNELSPN 213
AK ++ +++ V ++ + ++QRI+EFFG++ E+P+ RLI L + DM KYKP++ E++
Sbjct: 295 AKDFKGKVLFVYVNTEVEDNQRIVEFFGIQSSELPTIRLINLADDDMTKYKPTAAEITSE 354
Query: 214 AIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWC 393
++EFVQ+F D LK HLLS ++P DW +KPVKVL NFDEV + K V VEFYAPWC
Sbjct: 355 NVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAPWC 414
Query: 394 GHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLYSKDNQVHDYNG 573
GHCKQL PI+D+LGE +++ D+++AK+D+TANE+E K+ FPTIK + K+ + DYNG
Sbjct: 415 GHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHSFPTIKYFPKEGEAVDYNG 474
Query: 574 G 576
G
Sbjct: 475 G 475
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Frame = +1
Query: 307 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEND-DDVIIAKIDA 483
V VL NFDE V K VLVEFYAPWCGHCK L P Y K +++ ++ +AK+DA
Sbjct: 26 VLVLTEKNFDEAVA-ANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDA 84
Query: 484 TANEL--EHTKITXFPTIKLYSKDNQVHDYNGG 576
TA E ++ +PTIK + KD + +Y GG
Sbjct: 85 TAETKLGEKFQVQGYPTIKFF-KDGKPSEYAGG 116
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 119 bits (287), Expect = 2e-27
Identities = 73/186 (39%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Frame = +1
Query: 34 VAKTYRDRIMTVAIDADEYEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPN 213
VAK +RD +T AI +E Q + +F + E + E + P E S +
Sbjct: 439 VAKDHRD--ITFAIANEEESEQELKDFGLAESGEEVNVGCFDKEGRKFRMDPDEEEFSED 496
Query: 214 AIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWC 393
++ EFV+ F G LK + S+ +P +PV V+V FDE+V D K VL+EFYAPWC
Sbjct: 497 SLREFVEEFKAGNLKPIIKSQPVPKS-NKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWC 555
Query: 394 GHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHT-KITXFPTIKL-YSKDNQ-VHD 564
G L P + KLG+HF ND +++IAKIDATAN++ T + FPTI SKD +
Sbjct: 556 GIA--LEPTFKKLGKHFRNDKNIVIAKIDATANDVPSTYAVEGFPTIYFATSKDKKNPIK 613
Query: 565 YNGGED 582
++GG +
Sbjct: 614 FDGGRE 619
Score = 75.4 bits (177), Expect = 4e-14
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Frame = +1
Query: 307 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE-NDDDVIIAKIDA 483
V VL + NFD V+ + +LVEFYAPWCGHCK L P Y K + + ND V AK+DA
Sbjct: 63 VSVLNSKNFDRVI-EENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDA 121
Query: 484 T-ANEL-EHTKITXFPTIKLYSKDNQVHDYNG-GEDTG 588
T A+++ + ++ +PT+K++ K ++Y G E++G
Sbjct: 122 TVASDIAQRFDVSGYPTLKIFRKGTP-YEYEGPREESG 158
Score = 73.3 bits (172), Expect = 2e-13
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Frame = +1
Query: 289 DWAAKPVKVLVAA--NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDV 462
+W PV L NF EVV + +LVEF+APWCGHCKQL P Y+K + + D
Sbjct: 170 NWKPPPVAALTLTKENFTEVV-NRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPP 228
Query: 463 I-IAKIDAT-ANEL-EHTKITXFPTIKLYSKDNQVHDYNGGED 582
I +A +DAT +EL + ++ +PT+K++ K + +Y G D
Sbjct: 229 IPLAIVDATIESELAQKYEVQGYPTLKVFRK-GKATEYKGQRD 270
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 118 bits (284), Expect = 5e-27
Identities = 58/135 (42%), Positives = 85/135 (62%)
Frame = +1
Query: 91 EHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQSFFDGTLKQHLL 270
+++R+L G+ PSA + D + S ++ ++F++ +F G+LK H+
Sbjct: 796 DYERVLSDIGVTDKANPSA---VVYNDAGDKFLMKEKFSVDSFKQFLEDYFAGSLKPHIK 852
Query: 271 SEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEN 450
SE LP PVKV+V NF E+V D TK VL+EFYAPWCGHCK L P Y++LGE ++
Sbjct: 853 SEPLPESNDG-PVKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKLQD 911
Query: 451 DDDVIIAKIDATANE 495
D++IAK+DATAN+
Sbjct: 912 VKDIVIAKMDATAND 926
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAKIDAT-ANELEHTK--ITXFPTI 531
+LVEF+APWCGHCK+L P Y+ E +ND V +AK+D T A + +K ++ +PT+
Sbjct: 558 MLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTL 617
Query: 532 KLYSKDNQVHDYNGGEDT 585
K++ DY+G D+
Sbjct: 618 KIFRNGEMSKDYDGPRDS 635
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 93.5 bits (222), Expect = 1e-19
Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = +1
Query: 316 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATAN- 492
L NFDEVV + K LVEFYAPWCGHCKQL P Y++LGE + DVIIAK+DA +
Sbjct: 27 LTKDNFDEVV-NGEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDR 85
Query: 493 EL-EHTKITXFPTIKLYSKDNQV-HDYNGGED 582
+L + FPTIK + K + +YNGG D
Sbjct: 86 DLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRD 117
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +1
Query: 349 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT--ANELEHTKITXF 522
+ T+ VLV FYAPWCGHCK P Y+K E F++ + + AK+D T + + ++ +
Sbjct: 162 NNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGY 221
Query: 523 PTIKLYSKDNQVHDYNGGEDT 585
PT++ Y V +Y+G T
Sbjct: 222 PTLRYYLYGKFVVEYDGDRVT 242
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Frame = +1
Query: 286 ADWAAKPVKV--LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDD- 456
+DW+ KV L + DE + + + VLV ++APWCGHC ++ P Y K + ++D
Sbjct: 43 SDWSKDDSKVVFLTDESHDEFI-KSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDA 101
Query: 457 DVIIAKIDATANE--LEHTKITXFPTIKLYSKDNQVHDYNGGEDTGRPHQV 603
+ +A +D T ++ + + +PT+KLY N + ED+ Q+
Sbjct: 102 NCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = +1
Query: 316 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE 495
L NF++ V ++ LVEF+APWCGHC++L P + K + V + +DAT +
Sbjct: 84 LTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELKG--KVKVGALDATVHT 141
Query: 496 LEHTK--ITXFPTIKLYS----KDNQVHDYNGG 576
+ ++ + +PTIK+++ + V DY GG
Sbjct: 142 VTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGG 174
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 58.4 bits (135), Expect = 5e-09
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Frame = +1
Query: 82 DEYEHQRILEFFGMKKDEVPSARLIALEQDMAKYK-PSSNELSPNAIEEFVQSFFDGTLK 258
D E+ I E G++ A +I ++ A+Y S +++ +++ +FV L+
Sbjct: 440 DSEEYGIIAERLGVRWGADRVALVIVDVKNEAQYVFDESRQITNDSLVDFVMKSMTSKLE 499
Query: 259 QHLL---SEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDK 429
+ L + V + +FD++V + + VL+ FY PWCG C P+
Sbjct: 500 RRLRIPPPSGISCSREIVCVTEVTTDSFDDIVINNDQDVLLVFYTPWCGMCINFAPVLLA 559
Query: 430 LGEHFENDDDVIIAKIDATANELE-HTKITXFPTIKLY 540
+ F++ V + +IDA N+L + ++ +P+I L+
Sbjct: 560 VARFFQDISQVSVTRIDADQNDLPWNLTVSSYPSIILF 597
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Frame = +1
Query: 328 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHT 507
N DE V D +K V + FYAPW HC++++ I+D++ + F + DD+++ K +A + T
Sbjct: 35 NVDEYV-DGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRDDIVVGKSNAYEDVKIAT 93
Query: 508 K--ITXFPTIKLYSKDNQVHD-YNGG 576
+ I +P + + K + + Y+GG
Sbjct: 94 RYWIDRYPMFRYFIKGSTTEETYDGG 119
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 304 PVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLV-PIY 423
P+ L +NF+ VV + K VLV +Y C C Q+ P Y
Sbjct: 145 PLIELEKSNFERVVKNRAKDVLVFYYNGNCKLCDQMAYPYY 185
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +1
Query: 370 VEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLYSKD 549
V+FYAPWC HC +L PI+++L E F+++ D+ I+KI+ +PT+ L+
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDFKDNADITISKING------------YPTLMLFKDG 158
Query: 550 NQVHDYNGGED 582
Q +Y+G D
Sbjct: 159 VQKKEYSGNRD 169
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Frame = +1
Query: 325 ANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEH--FENDDDVIIAKIDATANEL 498
+NF+ V K VLV+FYAPWC HCK++ P Y + + + + V +AK+D +AN +
Sbjct: 142 SNFEPAV-QKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNM 200
Query: 499 EHTK------ITXFPTIKLYSKDNQVHDYNG 573
K + PTI L+ V ++ G
Sbjct: 201 ATKKTCKKYNVKFLPTIYLFHDGKFVEEFEG 231
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 289 DWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVI 465
D A+ V L NF+E + + VLV+FYAPWC C++L P++D +N+ +
Sbjct: 47 DPASPAVLNLNDQNFNETI-KKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLR 105
Query: 466 IAKIDATANE 495
AK+ + +E
Sbjct: 106 FAKVIYSIDE 115
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +1
Query: 316 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE 495
L A NFD+++ + +LV+FYAPWC HC++L+P + AK+D T
Sbjct: 25 LNAQNFDQMIREKDI-MLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPR 83
Query: 496 ----LEHTKITXFPTIKLYSKDNQVHDYNG 573
++ KI +P++KL+ DY G
Sbjct: 84 SKVLCDNFKIEGYPSVKLFKFGKYAGDYIG 113
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 325 ANFDEVVFDTTKK-VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELE 501
A F+ V+ +T K V+++FYA WCG C+Q+ P + K+ E DV AKID +ELE
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA--LEEFKDVFFAKID--VDELE 74
Query: 502 HTKITXFPTIKL 537
K+ +KL
Sbjct: 75 LEKLVGANEVKL 86
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAK 474
+LVEF+APWCGHCK+L P Y+ E +ND V +AK
Sbjct: 33 MLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 70
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +1
Query: 292 WAAKPVKVLVAAN--FDEVVFDTTKKVLVEFYAPWCGHCKQLVPIY-DKLGEHFENDDDV 462
W+ P +V+ + FD+ V VLV FYAPWCGHCK + P Y D E +
Sbjct: 77 WSDTPSEVVHLRDDMFDDFVAKNPS-VLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPG 135
Query: 463 IIAKIDATANEL--EHTKITXFPT 528
++A +DAT + K+ +PT
Sbjct: 136 VLAAVDATKEAALGKRFKVEGYPT 159
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 289 DWAAKPVKVLVAANFDEVVFDTTKK-VLVEFYAPWCGHCKQLVPIYDKLGEHFEN 450
+W+ P +V ++ F KK VLV FYAPWCGHCK+ P +H ++
Sbjct: 189 EWSEIPSEVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAAKHHKD 243
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 355 TKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA-TANELEHTK-ITXFPT 528
TK V+ +F A WCG CK + P+Y L E ++ + KID EL + +T PT
Sbjct: 27 TKLVVADFTASWCGPCKSIAPVYSGLSEKYK---QAVFLKIDVDVCQELAAKQGVTAMPT 83
Query: 529 IKLYSKDNQVHDYNGGE 579
+ + +V + G +
Sbjct: 84 FQFFKNKVKVDEVRGAD 100
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +1
Query: 304 PVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA 483
P+ L +FD + D + +LV+FYAPWC C L P Y+K + ++AK
Sbjct: 23 PIFELTDQDFDNFLKDK-EVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALM 81
Query: 484 TANELEHT 507
N + T
Sbjct: 82 NTNSTQTT 89
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 355 TKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANEL--EHTKITXFPT 528
++ V+++F A WCG CK + P++ L F DV+ K+D +L E I PT
Sbjct: 28 SRLVVIDFTATWCGPCKSIAPVFTNLSMKFM---DVVFLKVDVDQCQLTAESCGIRAMPT 84
Query: 529 IKLYSKDNQVHDYNGGE 579
Y ++ + G +
Sbjct: 85 FHFYHNKAKIDELRGAD 101
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 307 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 486
V L +F V ++ V+F+APWC C +L+P Y K F V +D T
Sbjct: 286 VHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVG-KPVGFGTVDCT 344
Query: 487 A-NELEHT-KITXFPTIKLYSKDNQVHDYNG 573
++L H I +PT LY+ ++Q H + G
Sbjct: 345 VHSQLCHQYNIRSYPTTILYN-NSQPHQFIG 374
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +1
Query: 328 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHT 507
NF V + +V+FYAPWCG C + P Y++L + + +
Sbjct: 442 NFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEA 501
Query: 508 KITXFPTIKLY 540
I +PT++LY
Sbjct: 502 NIHSYPTVRLY 512
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +1
Query: 331 FDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTK 510
FD+ + D + ++F A WCG C+ + P ++++ + F+ V AK+D N +E +
Sbjct: 4 FDKFLKDN-EVAAIDFTATWCGPCRMIGPKFEEMAKEFKG---VKCAKVDVDVNSVEVLR 59
Query: 511 I 513
+
Sbjct: 60 V 60
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +1
Query: 328 NFDEVVFDTTKKV-LVEFYAPWCGHCKQLVPIYDKLGEHFEN----DDDVIIAKIDATAN 492
+FD ++ ++ + +V F+APW HC Q+ + ++L + + + ++ +ID AN
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKENPHVNFIKNQKVVDRIDG-AN 69
Query: 493 ELEHTK 510
E TK
Sbjct: 70 APELTK 75
>SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30)
Length = 1152
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +1
Query: 325 ANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPI-YDKLGEHFENDDDVIIAKIDATANELE 501
+ F ++ +L F P+ C +P EHF+ ++A ++ TAN ++
Sbjct: 494 SGFHQIPLSKESTLLTTFITPFGRFCYNRLPFGITSAPEHFQKRMTSVLAGVEGTANMID 553
Query: 502 HTKITXFPTIKLYSKDNQVHD 564
T + Y +D Q HD
Sbjct: 554 DTLV--------YGRDQQEHD 566
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 358 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDD-DVIIAKIDATANE 495
K + V F A WC C+Q PI E ++ D++I + + +E
Sbjct: 26 KVIAVYFSAHWCPPCRQFTPILKDFYEELGGEEGDLVIIFVSSDRDE 72
>SB_52484| Best HMM Match : AbfB (HMM E-Value=0.011)
Length = 782
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 158 AIRRADGTSSFFMPKNSKILWCSYSSASMATVMIL 54
A++ DG F+ P S+ LW +YSS+S + + L
Sbjct: 59 AVKTPDG--KFYAPIPSQFLWTTYSSSSSSVCLFL 91
>SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 1163
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 704 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 736
>SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1017
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 391 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 423
>SB_41762| Best HMM Match : Tom22 (HMM E-Value=5.3)
Length = 568
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 151 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 183
>SB_35972| Best HMM Match : DUF1379 (HMM E-Value=5.5)
Length = 325
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 193 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 225
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 638 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 670
>SB_20221| Best HMM Match : RVT_1 (HMM E-Value=0.00045)
Length = 955
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 675 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 707
>SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5)
Length = 398
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 131 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 163
>SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1013
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 52 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 84
>SB_54171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 10 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 42
>SB_48899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 168 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 200
>SB_36000| Best HMM Match : DUF1379 (HMM E-Value=4.8)
Length = 420
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 231 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 263
>SB_32624| Best HMM Match : rve (HMM E-Value=0.00042)
Length = 415
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 52 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 84
>SB_23778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 229 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 261
>SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18)
Length = 838
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 245 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 277
>SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068)
Length = 1502
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 958 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 990
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 13 YLEDLKPVAKTYRDRIMTVAIDADEYEHQRILEFFGM---KKDEVP-SARLIALEQDMAK 180
Y+ + +A+ R+ + DAD EHQ +E G+ +E P SA +I ++ D +
Sbjct: 659 YMVEAPEIAEM-ESRVASSVKDADTEEHQSPMELSGVDTNASEENPQSAEVIEIQPDQVQ 717
Query: 181 YKP 189
KP
Sbjct: 718 EKP 720
>SB_1704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 186
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 131 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 163
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 195 TAGLVFGHVLFKGDQTGRWHLILLHA 118
T G +FGH L G +T H LHA
Sbjct: 770 TIGSIFGHQLMSGQKTNTRHTTDLHA 795
>SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 140 HLPV*SPLNKTWPNTSPAVMSCRLTLLRNSYNRSST 247
++PV SP W +S A +S +L+ N+YN +T
Sbjct: 170 YIPVYSPGTIVWGQSSGAPISINSSLIVNAYNEITT 205
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,234,161
Number of Sequences: 59808
Number of extensions: 327008
Number of successful extensions: 1105
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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