Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0555
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 128 5e-30
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 127 6e-30
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 122 3e-28
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 122 3e-28
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 121 5e-28
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 121 5e-28
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 109 2e-24
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 109 2e-24
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 97 1e-20
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 92 4e-19
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 75 6e-14
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 71 6e-13
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 61 8e-10
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 61 8e-10
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 61 8e-10
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 54 7e-08
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 52 4e-07
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 52 5e-07
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 50 1e-06
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 50 1e-06
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 50 1e-06
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 49 3e-06
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 47 1e-05
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 46 2e-05
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 46 3e-05
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 45 4e-05
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 44 1e-04
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 43 2e-04
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 41 7e-04
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 41 7e-04
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 40 0.002
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 40 0.002
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 40 0.002
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 40 0.002
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 39 0.003
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 39 0.003
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 39 0.004
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 38 0.008
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 37 0.011
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 37 0.015
At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / P... 36 0.020
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 36 0.020
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 36 0.026
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 35 0.045
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 35 0.060
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 34 0.079
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 34 0.10
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 34 0.10
At2g22310.1 68415.m02647 ubiquitin-specific protease 4 (UBP4) id... 34 0.10
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 33 0.18
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 33 0.18
At3g42410.1 68416.m04385 replication protein-related weak simila... 32 0.32
At4g21120.1 68417.m03054 amino acid permease family protein simi... 31 0.56
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 31 0.56
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 31 0.73
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 31 0.73
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 31 0.73
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 31 0.97
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 30 1.3
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 30 1.3
At5g55920.1 68418.m06975 nucleolar protein, putative similar to ... 30 1.7
At3g03860.1 68416.m00398 expressed protein 30 1.7
At4g08930.1 68417.m01470 thioredoxin-related contains weak simil... 29 3.0
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 29 3.0
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 29 3.0
At4g31240.2 68417.m04435 expressed protein 29 3.9
At4g31240.1 68417.m04434 expressed protein 29 3.9
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 28 5.2
At4g11080.1 68417.m01800 high mobility group (HMG1/2) family pro... 28 5.2
At1g34780.1 68414.m04329 protein disulfide isomerase-related con... 28 5.2
At3g49800.1 68416.m05445 BSD domain-containing protein contains ... 28 6.8
At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 27 9.0
At4g29790.1 68417.m04242 expressed protein 27 9.0
At3g30300.1 68416.m03826 expressed protein contains Pfam PF03138... 27 9.0
At1g79350.1 68414.m09247 DNA-binding protein, putative contains ... 27 9.0
At1g15720.1 68414.m01886 myb family transcription factor contain... 27 9.0
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 27 9.0
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 27 9.0
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 27 9.0
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 128 bits (308), Expect = 5e-30
Identities = 68/188 (36%), Positives = 105/188 (55%), Gaps = 1/188 (0%)
Frame = +1
Query: 4 SXKYLEDLKPVAKTYRDRIMTVAIDADEYEH-QRILEFFGMKKDEVPSARLIALEQDMAK 180
S K+L L+ VAK+++ + + V + D ++ + + FFG+ P + +DM K
Sbjct: 340 SEKHLPTLREVAKSFKGKFVFVYVQMDNEDYGEAVSGFFGVT-GAAPKVLVYTGNEDMRK 398
Query: 181 YKPSSNELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTK 360
+ EL+ N I+ + F LK S+ LP + VKV+V NFDE+V D +K
Sbjct: 399 FI-LDGELTVNNIKTLAEDFLADKLKPFYKSDPLPENNDGD-VKVIVGNNFDEIVLDESK 456
Query: 361 KVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLY 540
VL+E YAPWCGHC+ PIY+KLG++ + D +++AK+D T+NE K FPTI +
Sbjct: 457 DVLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDSLVVAKMDGTSNEHPRAKADGFPTILFF 516
Query: 541 SKDNQVHD 564
N+ D
Sbjct: 517 PGGNKSFD 524
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 301 KPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 480
K V VL NF E V + + +VEFYAPWCG C+ L P Y + +AKID
Sbjct: 99 KDVAVLTKDNFTEFVGNNSF-AMVEFYAPWCGACQALTPEYAAAATELKG--LAALAKID 155
Query: 481 AT--ANELEHTKITXFPTIKLYSKDNQVHDYNG 573
AT + + +I FPT+ L+ Y G
Sbjct: 156 ATEEGDLAQKYEIQGFPTVFLFVDGEMRKTYEG 188
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 127 bits (307), Expect = 6e-30
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 2/184 (1%)
Frame = +1
Query: 28 KPVAKTYRDRIMTVAIDADEYEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELS 207
+ VA + +D+ + + D Q ++FG+++ +VP +I D KY + E+
Sbjct: 287 REVATSNKDQSLAFLV-GDAESSQGAFQYFGLEESQVPL--IIIQTPDNKKYLKVNVEV- 342
Query: 208 PNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAP 387
+ IE + + F DG + H S+ +PA+ +PVKV+VA + D++VF + K VL+EFYAP
Sbjct: 343 -DQIESWFKDFQDGKVAVHKKSQPIPAE-NNEPVKVVVAESLDDIVFKSGKNVLIEFYAP 400
Query: 388 WCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANEL--EHTKITXFPTIKLYSKDNQVH 561
WCGHC++L PI D++ F+ND VIIAK+DATAN++ + + FPTI S V
Sbjct: 401 WCGHCQKLAPILDEVALSFQNDPSVIIAKLDATANDIPSDTFDVKGFPTIYFRSASGNVV 460
Query: 562 DYNG 573
Y G
Sbjct: 461 VYEG 464
Score = 65.7 bits (153), Expect = 3e-11
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Frame = +1
Query: 307 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDK-LGEHFENDDDVIIAKIDA 483
V L +NF E + ++VEFYAPWCGHC++L P Y+K E ++ + +AKIDA
Sbjct: 31 VLTLDHSNFTETI-SKHDFIVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDA 89
Query: 484 T--ANE--LEHTKITXFPTIK-LYSKDNQVHDYNG 573
+ AN+ KI FPT+K L + V DYNG
Sbjct: 90 SEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNG 124
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 122 bits (293), Expect = 3e-28
Identities = 63/188 (33%), Positives = 106/188 (56%), Gaps = 1/188 (0%)
Frame = +1
Query: 4 SXKYLEDLKPVAKTYRDRIMTVAIDADEYEHQR-ILEFFGMKKDEVPSARLIALEQDMAK 180
S K L + + AK+++ +++ V++D D ++ + + E+FG+ + P +D K
Sbjct: 344 SEKVLTEFQEAAKSFKGKLIFVSVDLDNEDYGKPVAEYFGVSGNG-PKLIGYTGNEDPKK 402
Query: 181 YKPSSNELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTK 360
Y E+ + I+ F + F + LK S+ +P + + VK++V NFDE+V D +K
Sbjct: 403 YF-FDGEIQSDKIKIFGEDFLNDKLKPFYKSDPIP-EKNDEDVKIVVGDNFDEIVLDDSK 460
Query: 361 KVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLY 540
VL+E YAPWCGHC+ L P+Y+KL +H + D ++I K+D T NE K FPTI +
Sbjct: 461 DVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILFF 520
Query: 541 SKDNQVHD 564
N+ +
Sbjct: 521 PAGNKTSE 528
Score = 79.8 bits (188), Expect = 2e-15
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 3/172 (1%)
Frame = +1
Query: 70 AIDADEYEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQSFFDG 249
A +D+ + + + +K+D+VP A ++ +++ E P+ + D
Sbjct: 26 ASSSDDVDDEDLSFLEDLKEDDVPGADSLSSSTGFDEFEGGEEE-DPDMYNDDDDEEGDF 84
Query: 250 TLKQHLLSEDLPA-DWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYD 426
+ + S+ LP + K V V+ NF +V+ + + VLVEFYAPWCGHC+ L P Y
Sbjct: 85 SDLGNPDSDPLPTPEIDEKDVVVIKERNFTDVI-ENNQYVLVEFYAPWCGHCQSLAPEYA 143
Query: 427 KLGEHFENDDDVIIAKIDAT-ANEL-EHTKITXFPTIKLYSKDNQVHDYNGG 576
+ +D V++AKIDAT NEL + ++ FPT+ L+ D + Y GG
Sbjct: 144 AAATELK-EDGVVLAKIDATEENELAQEYRVQGFPTL-LFFVDGEHKPYTGG 193
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 122 bits (293), Expect = 3e-28
Identities = 63/188 (33%), Positives = 106/188 (56%), Gaps = 1/188 (0%)
Frame = +1
Query: 4 SXKYLEDLKPVAKTYRDRIMTVAIDADEYEHQR-ILEFFGMKKDEVPSARLIALEQDMAK 180
S K L + + AK+++ +++ V++D D ++ + + E+FG+ + P +D K
Sbjct: 344 SEKVLTEFQEAAKSFKGKLIFVSVDLDNEDYGKPVAEYFGVSGNG-PKLIGYTGNEDPKK 402
Query: 181 YKPSSNELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTK 360
Y E+ + I+ F + F + LK S+ +P + + VK++V NFDE+V D +K
Sbjct: 403 YF-FDGEIQSDKIKIFGEDFLNDKLKPFYKSDPIP-EKNDEDVKIVVGDNFDEIVLDDSK 460
Query: 361 KVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLY 540
VL+E YAPWCGHC+ L P+Y+KL +H + D ++I K+D T NE K FPTI +
Sbjct: 461 DVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILFF 520
Query: 541 SKDNQVHD 564
N+ +
Sbjct: 521 PAGNKTSE 528
Score = 79.8 bits (188), Expect = 2e-15
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 3/172 (1%)
Frame = +1
Query: 70 AIDADEYEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQSFFDG 249
A +D+ + + + +K+D+VP A ++ +++ E P+ + D
Sbjct: 26 ASSSDDVDDEDLSFLEDLKEDDVPGADSLSSSTGFDEFEGGEEE-DPDMYNDDDDEEGDF 84
Query: 250 TLKQHLLSEDLPA-DWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYD 426
+ + S+ LP + K V V+ NF +V+ + + VLVEFYAPWCGHC+ L P Y
Sbjct: 85 SDLGNPDSDPLPTPEIDEKDVVVIKERNFTDVI-ENNQYVLVEFYAPWCGHCQSLAPEYA 143
Query: 427 KLGEHFENDDDVIIAKIDAT-ANEL-EHTKITXFPTIKLYSKDNQVHDYNGG 576
+ +D V++AKIDAT NEL + ++ FPT+ L+ D + Y GG
Sbjct: 144 AAATELK-EDGVVLAKIDATEENELAQEYRVQGFPTL-LFFVDGEHKPYTGG 193
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 121 bits (291), Expect = 5e-28
Identities = 63/166 (37%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
Frame = +1
Query: 82 DEYEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQSFFDGTLKQ 261
D Q ++FG+++ +VP +I D KY ++ E+ + IE +V+ F DG +
Sbjct: 306 DAENSQGAFQYFGLEESQVPL--IIIQTADDKKYLKTNVEV--DQIESWVKDFKDGKIAP 361
Query: 262 HLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEH 441
H S+ +PA+ +PVKV+V+ + D++V ++ K VL+EFYAPWCGHC++L PI D++
Sbjct: 362 HKKSQPIPAE-NNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVS 420
Query: 442 FENDDDVIIAKIDATANEL--EHTKITXFPTIKLYSKDNQVHDYNG 573
+++D V+IAK+DATAN+ + + FPTI S V Y G
Sbjct: 421 YQSDSSVVIAKLDATANDFPKDTFDVKGFPTIYFKSASGNVVVYEG 466
Score = 67.3 bits (157), Expect = 9e-12
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAKIDA---TANEL-EHTKITXFPT 528
++VEFYAPWCGHCKQL P Y+K N V++AKIDA T E ++ FPT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 529 IKLYSKDNQ-VHDYNG 573
IK++ + V +YNG
Sbjct: 110 IKIFRNGGKAVQEYNG 125
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 121 bits (291), Expect = 5e-28
Identities = 63/166 (37%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
Frame = +1
Query: 82 DEYEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQSFFDGTLKQ 261
D Q ++FG+++ +VP +I D KY ++ E+ + IE +V+ F DG +
Sbjct: 306 DAENSQGAFQYFGLEESQVPL--IIIQTADDKKYLKTNVEV--DQIESWVKDFKDGKIAP 361
Query: 262 HLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEH 441
H S+ +PA+ +PVKV+V+ + D++V ++ K VL+EFYAPWCGHC++L PI D++
Sbjct: 362 HKKSQPIPAE-NNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVS 420
Query: 442 FENDDDVIIAKIDATANEL--EHTKITXFPTIKLYSKDNQVHDYNG 573
+++D V+IAK+DATAN+ + + FPTI S V Y G
Sbjct: 421 YQSDSSVVIAKLDATANDFPKDTFDVKGFPTIYFKSASGNVVVYEG 466
Score = 67.3 bits (157), Expect = 9e-12
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAKIDA---TANEL-EHTKITXFPT 528
++VEFYAPWCGHCKQL P Y+K N V++AKIDA T E ++ FPT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 529 IKLYSKDNQ-VHDYNG 573
IK++ + V +YNG
Sbjct: 110 IKIFRNGGKAVQEYNG 125
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 109 bits (261), Expect = 2e-24
Identities = 49/95 (51%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Frame = +1
Query: 307 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 486
V VL NFDE+V D K VLVEFYAPWCGHCK L P Y+K+ F+ ++ V+IA +DA
Sbjct: 143 VVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDAD 202
Query: 487 ANEL--EHTKITXFPTIKLYSKDNQV-HDYNGGED 582
A++ E ++ FPT+K + KDN+ HDY+GG D
Sbjct: 203 AHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRD 237
Score = 74.5 bits (175), Expect = 6e-14
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Frame = +1
Query: 298 AKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKI 477
A V VL +F++ V K LVEFYAPWCGHCK+L P Y+KLG F+ V+IAK+
Sbjct: 22 ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKV 80
Query: 478 DATANELEHTK--ITXFPTIKLYSKDN-QVHDYNG 573
D + TK ++ +PTI+ + K + + Y G
Sbjct: 81 DCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEG 115
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 109 bits (261), Expect = 2e-24
Identities = 49/95 (51%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Frame = +1
Query: 307 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 486
V VL NFDE+V D K VLVEFYAPWCGHCK L P Y+K+ F+ ++ V+IA +DA
Sbjct: 143 VVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDAD 202
Query: 487 ANEL--EHTKITXFPTIKLYSKDNQV-HDYNGGED 582
A++ E ++ FPT+K + KDN+ HDY+GG D
Sbjct: 203 AHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRD 237
Score = 74.5 bits (175), Expect = 6e-14
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Frame = +1
Query: 298 AKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKI 477
A V VL +F++ V K LVEFYAPWCGHCK+L P Y+KLG F+ V+IAK+
Sbjct: 22 ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKV 80
Query: 478 DATANELEHTK--ITXFPTIKLYSKDN-QVHDYNG 573
D + TK ++ +PTI+ + K + + Y G
Sbjct: 81 DCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEG 115
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 96.7 bits (230), Expect = 1e-20
Identities = 56/176 (31%), Positives = 100/176 (56%), Gaps = 2/176 (1%)
Frame = +1
Query: 19 EDLKPVAKTYRDRIMTVAID-ADEYEHQRILEFFGMKKDEVPSARLIALEQDM-AKYKPS 192
+ L+ +A+ ++ ++M + ID ++E L FG+ ++ + A + ++ +KY
Sbjct: 324 QPLEDIARKFKSKLMLIYIDISNENLAMPFLTLFGI--EDAKKTVVAAFDNNLNSKYLLE 381
Query: 193 SNELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLV 372
S+ SP+ IEEF GT+ + S+ +P + A V V V FDEVV +++ VL+
Sbjct: 382 SDP-SPSNIEEFCFGLAHGTVSAYYKSQPIPDNQNASVVAV-VGRTFDEVVLRSSENVLL 439
Query: 373 EFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLY 540
E + PWC +C+ L +KL +HF+ ++++ A+IDA+ANE + +PTI LY
Sbjct: 440 EVHTPWCINCEALSKQVEKLSQHFKGFENLVFARIDASANEHPKLTVDDYPTILLY 495
Score = 46.0 bits (104), Expect = 2e-05
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Frame = +1
Query: 154 IALEQDMAKYKPSSNELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANF 333
+A D+A S EL +E+ + D L++ + A+ +K +++V N
Sbjct: 27 VARSSDVAVEAGSEEELDD--LEQLLA--VDEQLQEERPEQQSEAETVSKAQRIVVELNG 82
Query: 334 DEV--VFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAKIDAT--ANEL 498
D + D + V+V YAPWC +L+P + + E V++AKID +
Sbjct: 83 DNTKRLIDGNEYVMVLGYAPWCARSAELMPRFAEAATDLKEIGSSVLMAKIDGERYSKVA 142
Query: 499 EHTKITXFPTIKLYSKDNQVHDYNGG 576
+I FPT+ L+ Y GG
Sbjct: 143 SQLEIKGFPTLLLFVNGTS-QSYTGG 167
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 91.9 bits (218), Expect = 4e-19
Identities = 58/182 (31%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Frame = +1
Query: 10 KYLEDLKPVAKTYRDRIMTVAID-ADEYEHQRILEFFGMKKDEVPSARLIALEQDM-AKY 183
K + L+ +A+ ++ ++M + +D +E L FG++ + A + ++ +KY
Sbjct: 322 KLAQPLEDIARKFKSKLMFIYVDITNENLAMPFLILFGIEAGN--KTVVAAFDNNLNSKY 379
Query: 184 KPSSNELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKK 363
S+ SPN+IEEF GT+ ++ SE +P + A V V V FD +V ++ +
Sbjct: 380 LLESDP-SPNSIEEFCSGLAHGTVSRYYRSEPVPDNENASIVTV-VGKTFDGLVLNSREN 437
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKI---TXFPTIK 534
VL+E + PWC +C+ L +KL +HF+ ++++ A+IDA+AN EHTK+ +P I
Sbjct: 438 VLLEVHTPWCVNCEALSKQIEKLAKHFKGFENLVFARIDASAN--EHTKLQVDDKYPIIL 495
Query: 535 LY 540
LY
Sbjct: 496 LY 497
Score = 47.2 bits (107), Expect = 1e-05
Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Frame = +1
Query: 205 SPNAIEEFVQSFFDGTLKQHL-----LSEDLP-----ADWAAKPVKVLVAANFDEV--VF 348
SP++ E + FD L Q L L ED P A+ +K ++++ N D V
Sbjct: 32 SPDSNVESNEPGFDSDLDQLLAVDEQLQEDRPEQQSEAETVSKAQRIVLELNGDYTKRVI 91
Query: 349 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAKIDA-----TANELEHTK 510
D + V+V YAPWC +L+P + + E V++AKID A+ELE
Sbjct: 92 DGNEFVMVLGYAPWCARSAELMPRFAEAATALKEIGSSVLMAKIDGDRYSKIASELE--- 148
Query: 511 ITXFPTIKLYSKDNQVHDYNGG 576
I FPT+ L+ + YNGG
Sbjct: 149 IKGFPTLLLFVNGTSL-TYNGG 169
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 74.5 bits (175), Expect = 6e-14
Identities = 36/96 (37%), Positives = 50/96 (52%)
Frame = +1
Query: 295 AAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAK 474
++ PV L A+NF V ++ VLVEF+APWCGHCK L P ++K+ + V
Sbjct: 28 SSSPVVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAID 87
Query: 475 IDATANELEHTKITXFPTIKLYSKDNQVHDYNGGED 582
DA + + I FPTIK++ DY G D
Sbjct: 88 ADAHQSAAQDYGIKGFPTIKVFVPGKAPIDYQGARD 123
Score = 70.1 bits (164), Expect = 1e-12
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 8/188 (4%)
Frame = +1
Query: 34 VAKTYRDRIMTVAIDADEYEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPN 213
VA + AIDAD HQ + +G+K P+ ++ + Y+ + + S
Sbjct: 73 VANILKGVATVAAIDADA--HQSAAQDYGIKG--FPTIKVFVPGKAPIDYQGARDAKS-- 126
Query: 214 AIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKV-------LVAANFDEVVFDTTKKVLV 372
I F G L L + P +K K L A+NFD++V ++ + +V
Sbjct: 127 -IANFAYKQIKGLLSDRLEGKSKPTGGGSKEKKSEPSASVELNASNFDDLVIESNELWIV 185
Query: 373 EFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLYSKD- 549
EF+APWCGHCK+L P + + ++ + + D + + K+ FPTI ++ D
Sbjct: 186 EFFAPWCGHCKKLAPEWKRAAKNLQGKVKLGHVNCDVEQSIMSRFKVQGFPTILVFGPDK 245
Query: 550 NQVHDYNG 573
+ + Y G
Sbjct: 246 SSPYPYEG 253
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/106 (32%), Positives = 53/106 (50%)
Frame = +1
Query: 295 AAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAK 474
++ PV L +NF V ++ VLVEF+APWCGHC+ L P ++K+ + V
Sbjct: 26 SSSPVLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAID 85
Query: 475 IDATANELEHTKITXFPTIKLYSKDNQVHDYNGGEDTGRPHQVSLR 612
DA + + + FPTIK++ DY G D Q +++
Sbjct: 86 ADAHKSVSQDYGVRGFPTIKVFVPGKPPIDYQGARDAKSISQFAIK 131
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +1
Query: 316 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE 495
L ++NFDE+V ++ + +VEF+APWCGHCK+L P + K + + + DA +
Sbjct: 168 LNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVNCDAEQSI 227
Query: 496 LEHTKITXFPTIKLYSKD 549
K+ FPTI ++ D
Sbjct: 228 KSRFKVQGFPTILVFGSD 245
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 280 LPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDD 459
+P + V L F + + + V+F PWC HCK+L +++ LG+ E DD+
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDE 77
Query: 460 VIIAKIDATANELEHTK--ITXFPTIKLYSKDNQVHDYNGGED 582
+ + ++D + TK I +PT L+ +V Y G D
Sbjct: 78 IEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRD 120
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 280 LPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDD 459
+P + V L F + + + V+F PWC HCK+L +++ LG+ E DD+
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDE 77
Query: 460 VIIAKIDATANELEHTK--ITXFPTIKLYSKDNQVHDYNGGED 582
+ + ++D + TK I +PT L+ +V Y G D
Sbjct: 78 IEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRD 120
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 280 LPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDD 459
+P + V L F + + + V+F PWC HCK+L +++ LG+ E DD+
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDE 77
Query: 460 VIIAKIDATANELEHTK--ITXFPTIKLYSKDNQVHDYNGGED 582
+ + ++D + TK I +PT L+ +V Y G D
Sbjct: 78 IEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRD 120
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 54.4 bits (125), Expect = 7e-08
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 316 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEN-DDDVIIAKIDAT-- 486
L +NFD + T + V+FYAPWCGHCK+L P D ++IAK++A
Sbjct: 37 LTDSNFDSAI-STFDCIFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNADKY 95
Query: 487 ANELEHTKITXFPTIKLYS 543
+ +I FPT+ LY+
Sbjct: 96 SRLARKIEIDAFPTLMLYN 114
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +1
Query: 307 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 486
++V+ + +D +V T V+V+F+APWCG CK + P+ + L +H+ D +
Sbjct: 82 IQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDES 141
Query: 487 ANELEHTKITXFPTIKLY 540
N + PTI ++
Sbjct: 142 PNTPGQYGVRSIPTIMIF 159
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 328 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT--ANELE 501
+FD+++ ++ K VLV+FYA WCG C+ +VPI +++ E + D + + KID +
Sbjct: 67 SFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLK--DIIAVVKIDTEKYPSLAN 124
Query: 502 HTKITXFPTIKLYSKDNQVHD 564
+I PT L+ KD ++ D
Sbjct: 125 KYQIEALPTFILF-KDGKLWD 144
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/88 (29%), Positives = 48/88 (54%)
Frame = +1
Query: 328 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHT 507
+F++++ ++ K VLV++YA WCG C+ +VPI +++ E ++ V+ + +
Sbjct: 72 SFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKY 131
Query: 508 KITXFPTIKLYSKDNQVHDYNGGEDTGR 591
KI PT L+ KD + D G T +
Sbjct: 132 KIEALPTFILF-KDGEPCDRFEGALTAK 158
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 307 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 486
+K + + F V ++ + VLVEF A WCG CK + P + L + E D + I KID
Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQ--EYGDKLTIVKIDHD 128
Query: 487 ANE--LEHTKITXFPTIKLYSKDNQV 558
AN + K+ P L+ +V
Sbjct: 129 ANPKLIAEFKVYGLPHFILFKDGKEV 154
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +1
Query: 295 AAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAK 474
AA V L + + V ++ VLVEF+APWCG C+ + PI D+L + F
Sbjct: 84 AAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKIN 143
Query: 475 IDATANELEHTKITXFPTIKLY 540
D + N I PT+ ++
Sbjct: 144 TDESPNTANRYGIRSVPTVIIF 165
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = +1
Query: 316 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF------ENDDDVIIAKI 477
L NFD V V FYAPWC C L P ++K + E D VI+AK+
Sbjct: 146 LTGRNFDTFTHQFPILV-VNFYAPWCYWCNLLKPSWEKAAKQIKERYDPEMDGRVILAKV 204
Query: 478 DAT--ANELEHTKITXFPTIKLYSKDNQVHDYNGGED 582
D T + I +P+I+++ K + + D N D
Sbjct: 205 DCTQEGDLCRRNHIQGYPSIRIFRKGSDLKDDNAHHD 241
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/98 (24%), Positives = 42/98 (42%)
Frame = +1
Query: 286 ADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVI 465
ADW+ + + E+ T V+V F A WCG C+ ++PI +K+ ++N+
Sbjct: 205 ADWSGLIAWLPLLLRITELN-SQTPHVMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFY 263
Query: 466 IAKIDATANELEHTKITXFPTIKLYSKDNQVHDYNGGE 579
D E I+ PT ++ Q+ G +
Sbjct: 264 TVNFDTEIRFTERFDISYLPTTLVFKGGEQMAKVTGAD 301
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +1
Query: 358 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTK---ITXFPT 528
K V+++ Y WCG CK + P Y L E + DDV+ K+D + K I PT
Sbjct: 88 KLVVLDMYTQWCGPCKVIAPKYKALSEKY---DDVVFLKLDCNPDNRPLAKELGIRVVPT 144
Query: 529 IKLYSKDNQV 558
K+ KDN+V
Sbjct: 145 FKIL-KDNKV 153
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/93 (24%), Positives = 45/93 (48%)
Frame = +1
Query: 328 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHT 507
+F+E+ ++ K ++V+F A WCG C+ + P + + F ND D + +D + +
Sbjct: 39 HFNEIK-ESNKLLVVDFSASWCGPCRMIEPAIHAMADKF-NDVDFVKLDVDELPDVAKEF 96
Query: 508 KITXFPTIKLYSKDNQVHDYNGGEDTGRPHQVS 606
+T PT L + ++ G + +VS
Sbjct: 97 NVTAMPTFVLVKRGKEIERIIGAKKDELEKKVS 129
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +1
Query: 298 AKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKI 477
A + V+ + +D +V + V V+F+APWCG CK + PI ++L + +
Sbjct: 73 ATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNT 132
Query: 478 DATANELEHTKITXFPTIKLY 540
D + + PTI ++
Sbjct: 133 DESPATPGQYGVRSIPTIMIF 153
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 358 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTK---ITXFPT 528
K V+++ Y WCG CK + P Y +L E ++ D++ K+D + K I PT
Sbjct: 98 KIVVLDMYTQWCGPCKVIAPKYKELSEKYQ---DMVFLKLDCNQDNKPLAKELGIRVVPT 154
Query: 529 IKLYSKDNQV 558
K+ KDN+V
Sbjct: 155 FKIL-KDNKV 163
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 316 LVAANFDEVVFDTTKK-VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDV 462
L NFD V+ DT K +VEF+A WC C+ P Y+K+ F D +
Sbjct: 40 LNTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYKPHYEKVARLFNGPDAI 89
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 316 LVAANFDEVVFDTTKKVLV-EFYAPWCGHCKQLVPIYDKLGEHFENDDDV 462
L A NFD V D+ K V EF+A WC C+ P Y+K+ F D V
Sbjct: 46 LNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARLFNGADAV 95
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 316 LVAANFDEVVFDTTKKVLV-EFYAPWCGHCKQLVPIYDKLGEHFENDDDV 462
L A NFD V D+ K V EF+A WC C+ P Y+K+ F D V
Sbjct: 46 LNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARLFNGADAV 95
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 355 TKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANEL-EHTKITXFPTI 531
++ +++E+ A WC C L P +KL + N ++ L + I+ PTI
Sbjct: 118 SQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTI 177
Query: 532 KLYSKDNQVHDYNGG 576
+L+ +D + GG
Sbjct: 178 QLWKEDEMKEEVIGG 192
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 337 EVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELE 501
E K +VEFYA WC C++L P K+ + +++ + ++ +D T E E
Sbjct: 132 EEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQE 186
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +1
Query: 307 VKVLVAANFDEVVFDTTK-KVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA 483
VK L A E+V K ++V+FYA WCG C + + L +E+ + II K+D
Sbjct: 77 VKKLSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEMLAVEYES--NAIIVKVD- 133
Query: 484 TANELEHTK---ITXFPTIKLYSKD 549
T +E E + + PT+ S D
Sbjct: 134 TDDEYEFARDMQVRGLPTLFFISPD 158
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +1
Query: 349 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPT 528
DT K +++EF A WCG CK L P ++L + D + + +D + ++ P
Sbjct: 57 DTNKLLVIEFTAKWCGPCKTLEPKLEELAAKY-TDVEFVKIDVDVLMSVWMEFNLSTLPA 115
Query: 529 IKLYSKDNQV 558
I + +V
Sbjct: 116 IVFMKRGREV 125
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 367 LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLYSK 546
++ + A WCG C Q++P + KL F + + A ID H + T PT + Y
Sbjct: 47 VINYGASWCGVCSQILPAFRKLSNSF-SKLKFVYADIDECPETTRHIRYT--PTFQFYRD 103
Query: 547 DNQVHD-YNGGE 579
+V + + GE
Sbjct: 104 GEKVDEMFGAGE 115
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +1
Query: 328 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHT 507
++++ V + VLVEFY WCG C+ + I D++ + + + D E
Sbjct: 75 SWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEY 134
Query: 508 KITXFPTIKLY 540
+I P + L+
Sbjct: 135 EIKAVPVVLLF 145
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 367 LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTK----ITXFPTIK 534
+V YAPWC C+ + YD+L + + +AK A ++ E K + FPTI
Sbjct: 377 IVVLYAPWCPFCQAMEASYDELADKLAG-SGIKVAKFRADGDQKEFAKQELQLGSFPTIL 435
Query: 535 LYSKDN 552
++ K++
Sbjct: 436 VFPKNS 441
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 349 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE--LEHTKITXF 522
++ K ++++F A WC C+ + P++ ++ + F N V+ KID + + K+
Sbjct: 25 ESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTN---VVFFKIDVDELQAVAQEFKVEAM 81
Query: 523 PTIKLYSKDNQVHD 564
PT ++ K+ + D
Sbjct: 82 PTF-VFMKEGNIID 94
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 367 LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTK----ITXFPTIK 534
LV YAPWC C+ + Y +L E V +AK A + E K + FPTI
Sbjct: 366 LVVLYAPWCPFCQAMEASYIELAEKLAG-KGVKVAKFRADGEQKEFAKQELQLGSFPTIL 424
Query: 535 LYSK 546
L+ K
Sbjct: 425 LFPK 428
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +1
Query: 349 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPT 528
++ K ++++F A WC C+ + PI++ L + F + +D + + + PT
Sbjct: 26 ESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPT 85
Query: 529 IKLYSKDNQVHD 564
++ K +V D
Sbjct: 86 F-VFIKAGEVVD 96
>At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / PAPS
reductase homolog (PRH26) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738760; identical to cDNA PAPS reductase homolog
(PRH26) GI:1710113
Length = 458
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 367 LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTK----ITXFPTIK 534
+V YAPWC C+ + +D+L + V +AK A ++ + K + FPTI
Sbjct: 370 IVVLYAPWCPFCQAMEASFDELADKL-GGSGVKVAKFRADGDQKDFAKKELQLGSFPTIL 428
Query: 535 LYSKDN 552
++ K++
Sbjct: 429 VFPKNS 434
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLG----EHFE--NDDDVIIAKIDATANE--LEHTKITX 519
++V FYAPWC +L P + K E + DD V++ +D T + I
Sbjct: 162 LVVNFYAPWCYWSNRLKPSWVKASQITRERYNPGTDDRVLLGSVDCTEEPTLCKSNHIQG 221
Query: 520 FPTIKLYSKDNQVHDYNGGED 582
+P+I+++ + + + + +G +
Sbjct: 222 YPSIRIFRRGSGLREDHGNHE 242
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/75 (21%), Positives = 35/75 (46%)
Frame = +1
Query: 349 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPT 528
++ + +LV + +P CG C+ L PI +K+ + + +D + I+ E I P
Sbjct: 440 ESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAAGIMGTPC 499
Query: 529 IKLYSKDNQVHDYNG 573
++ + + +G
Sbjct: 500 VQFFKNKEMLRTISG 514
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 35.1 bits (77), Expect = 0.045
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 355 TKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA-TANELEHT-KITXFPT 528
++ +++ F A WCG C+ + P+Y L V+ K+D AN++ + I+ PT
Sbjct: 292 SRLLILYFTATWCGPCRYMSPLYSNLATQHSR---VVFLKVDIDKANDVAASWNISSVPT 348
Query: 529 IKLYSKDNQVHDYNGGEDTGRPHQ 600
+ +D + D G D G Q
Sbjct: 349 F-CFIRDGKEVDKVVGADKGSLEQ 371
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 349 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATA--NELEHTKITXF 522
++ K ++++F A WC C+ + P++ L + DV+ K+D E K+
Sbjct: 25 ESKKLIVIDFTATWCPPCRFIAPVFADLA---KKHLDVVFFKVDVDELNTVAEEFKVQAM 81
Query: 523 PTIKLYSKDNQVHD 564
PT ++ K+ ++ +
Sbjct: 82 PTF-IFMKEGEIKE 94
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 34.3 bits (75), Expect = 0.079
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE--LEHTKITXFPTIKL 537
V+V+FY WCG C+ + P KL + + +++ K++ N+ + + P
Sbjct: 116 VIVDFYGTWCGSCRAMFP---KLCKTAKEHPNILFLKVNFDENKSLCKSLNVKVLPYFHF 172
Query: 538 Y-SKDNQVHDYN 570
Y D QV ++
Sbjct: 173 YRGADGQVESFS 184
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE--LEHTKITXFPTIKL 537
V+VEFY WC C+ L P KL + D++ K++ N+ + + P
Sbjct: 126 VIVEFYGTWCASCRALFP---KLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPFFHF 182
Query: 538 Y-SKDNQVHDYN 570
Y D Q+ ++
Sbjct: 183 YRGADGQLESFS 194
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE--LEHTKITXFPTIKL 537
V+VEFY WC C+ L P KL + D++ K++ N+ + + P
Sbjct: 126 VIVEFYGTWCASCRALFP---KLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPFFHF 182
Query: 538 Y-SKDNQVHDYN 570
Y D Q+ ++
Sbjct: 183 YRGADGQLESFS 194
>At2g22310.1 68415.m02647 ubiquitin-specific protease 4 (UBP4)
identical to GI:2347100
Length = 365
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = -2
Query: 417 RDQLFAVAAPRSVEFDEDLLSCVEDDFVKVGGDEHFDGFGGPVR--GQVLAQQMLLQGAV 244
R+QL A + +E+LL+C+ D F ++ + G P R ++ Q L + +
Sbjct: 48 REQLLEHYANNKADAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYM 107
Query: 243 EERLYEFLNSVRRQLI 196
+ +EFLN + +L+
Sbjct: 108 HQDAHEFLNYLLNELV 123
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 480
V+V+F A WCG C+ + P + L + N V+ K+D
Sbjct: 31 VVVDFTASWCGPCRFIAPFFADLAKKLPN---VLFLKVD 66
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 376 FYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID----ATANELEHTKITXFPTIKLYS 543
F A WCG C+ + P+ +L + + DV K+D +N + IT PT+ +
Sbjct: 113 FTAAWCGPCRFISPVIVELSKQY---PDVTTYKVDIDEGGISNTISKLNITAVPTLHFFK 169
Query: 544 KDNQVHDYNGGEDT 585
++ + G + T
Sbjct: 170 GGSKKGEVVGADVT 183
>At3g42410.1 68416.m04385 replication protein-related weak
similarity to Replication Protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) (DMRPA1)
(GI:2498844)(SP:Q24492) [Drosophila melanogaster]
Length = 474
Score = 32.3 bits (70), Expect = 0.32
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 409 LVPIYDK---LGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLYSKDNQVHDYNGGE 579
L P YD +G + DD+V+ KID T +++ K F +KL N +Y+G E
Sbjct: 239 LFPDYDLQTYIGWNAYGDDEVVDGKIDYTFSDVHPRKTRWFVFVKLLRLWNWPPNYDGEE 298
Query: 580 DT 585
T
Sbjct: 299 PT 300
>At4g21120.1 68417.m03054 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 594
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 13 YLEDLKPVAKTYRDRIMTVAIDADEYEHQRILEFFGMKK 129
YL+ LK + DRIMT ++D+DE + MKK
Sbjct: 34 YLKALKETPSRFMDRIMTRSLDSDEINEMKARSGHEMKK 72
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +1
Query: 358 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKL 537
K ++V F A WC K ++PIY +L + + V I ++ A + PT+
Sbjct: 63 KILVVNFKASWCLPSKTILPIYQELASTYTSMIFVTI-DVEELAEFSHEWNVDATPTVVF 121
Query: 538 YSKDNQVHDYNGGE 579
Q+ GG+
Sbjct: 122 LKDGRQMDKLVGGD 135
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 480
V+++FY+P CG CK L P K+ + E + +V+ K++
Sbjct: 108 VVLDFYSPGCGGCKSLHP---KICQLAETNPNVMFLKVN 143
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 31.1 bits (67), Expect = 0.73
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 358 KKVLVEFYAPWCGHCKQLVPIYDKLGE 438
K V+ F A WCG CK + P + +L E
Sbjct: 46 KIVVANFSATWCGPCKIVAPFFIELSE 72
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 358 KKVLVEFYAPWCGHCKQLVPIYDKLGE 438
K V+V+F++P CG CK L P K+ E
Sbjct: 114 KLVVVDFFSPSCGGCKALHPKICKIAE 140
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 30.7 bits (66), Expect = 0.97
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +1
Query: 382 APWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLYSKDNQVH 561
APWC CK++ P++ L + + V + ++ A + PT+ ++ KD +
Sbjct: 17 APWCVPCKKIEPVFRDLASRYPSMIFVTV-DVEELAEFSNEWNVEATPTV-VFLKDGRQM 74
Query: 562 DYNGGEDT 585
D G +T
Sbjct: 75 DKLVGAET 82
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 352 TTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 480
+ K ++++F A WCG CK + P ++ + + + A++D
Sbjct: 42 SNKLLVIDFTAVWCGPCKAMEPRVREIASKY---SEAVFARVD 81
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 358 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 480
K V+V+F++P CG CK L P K+ + E + DV +++
Sbjct: 118 KLVVVDFFSPGCGGCKALHP---KICQFAEMNPDVQFLQVN 155
>At5g55920.1 68418.m06975 nucleolar protein, putative similar to
SP|P46087 Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120) {Homo
sapiens}, SP|P40991 Nucleolar protein NOP2
{Saccharomyces cerevisiae}; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 682
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 445 ENDDDVIIAKIDATANELEHTKITXFPTIKLYSKDNQVHDYNGGEDTGR-PHQVSLRPTX 621
++DDD I+AK DA +L K ++ + K + VHD D R P + L
Sbjct: 146 DSDDDDIVAKSDAIDRDLAMQKKDAAAELEDFIKQDDVHDEEPEHDAFRLPTEEELEEEA 205
Query: 622 XAP 630
P
Sbjct: 206 RGP 208
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/91 (23%), Positives = 35/91 (38%)
Frame = +1
Query: 370 VEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKLYSKD 549
V FYA WC + + P +D L F + + A + I P+I + ++
Sbjct: 79 VLFYASWCPFSRAVRPKFDMLSSMFPQIQHLAVEHSQALPSVFSRYGIHSLPSILMVNQT 138
Query: 550 NQVHDYNGGEDTGRPHQVSLRPTXXAPSQYL 642
Y+G +D + T P QY+
Sbjct: 139 LNAR-YHGRKDLISLIEFYEEATGLQPVQYV 168
>At4g08930.1 68417.m01470 thioredoxin-related contains weak
similarity to Swiss-Prot:Q39239 thioredoxin H-type 4
(TRX-H-4). [Mouse-ear cress]
Length = 295
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 376 FYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKL 537
FYA WC + + P +D + + + I + A+ L + FPTI L
Sbjct: 81 FYASWCPFSRLVRPSFDLMSLLYSSVPHFAIEESSVKASTLSKYGVHGFPTIIL 134
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Frame = +1
Query: 271 SEDLPADWAAKPVKVLVAANFDEVVFDTT--KKVLVEFYAPWCGHCK----QLVPIYDKL 432
++DL + ++ LV + ++V D+ KK+ + F A WCG C+ QLV +Y++L
Sbjct: 13 AQDLHSLLSSPARDFLVRNDGEQVKVDSLLGKKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 376 FYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID----ATANELEHTKITXFPTIKLY 540
F A WCG C+ + P+ +L + DV K+D +N + ++ PT++ +
Sbjct: 78 FTAAWCGPCRLISPVILELSNKY---PDVTTYKVDIDEGGLSNAIGKLNVSAVPTLQFF 133
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 271 SEDLPADWAAKPVKVLVAANFD-EVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 447
S DL + AA+ ++ L++ + + + + K + + F A WC CK P KL E+ +
Sbjct: 14 SGDLYSILAAEGIEFLLSHSGEVPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQ 73
Query: 448 N 450
N
Sbjct: 74 N 74
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 271 SEDLPADWAAKPVKVLVAANFD-EVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 447
S DL + AA+ ++ L++ + + + + K + + F A WC CK P KL E+ +
Sbjct: 14 SGDLYSILAAEGIEFLLSHSGEVPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQ 73
Query: 448 N 450
N
Sbjct: 74 N 74
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373:
jmjC domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 588 PASPSFVETDGEXAEPVPSVTEFEKE 665
P +P F TD E A+P+ +++ EKE
Sbjct: 14 PLAPVFRPTDTEFADPIAYISKIEKE 39
>At4g11080.1 68417.m01800 high mobility group (HMG1/2) family
protein similar to SP|P40618 High mobility group protein
HMG2A {Gallus gallus}; contains Pfam profile PF00505:
HMG (high mobility group) box
Length = 446
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/77 (19%), Positives = 36/77 (46%)
Frame = +1
Query: 13 YLEDLKPVAKTYRDRIMTVAIDADEYEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPS 192
YL++++ +T + M+ + +E+ E + K + + +I ++ AK K
Sbjct: 304 YLQEMEGYKRTKEEEAMSQKKEEEEFMKLHKQEALQLLKKKEKTDNIIKKTKETAKNKKK 363
Query: 193 SNELSPNAIEEFVQSFF 243
+ + PN ++ S+F
Sbjct: 364 NENVDPNKPKKPTSSYF 380
>At1g34780.1 68414.m04329 protein disulfide isomerase-related
contains weak similarity to Pfam:P08003 protein
disulfide isomerase A4 precursor (Protein ERp-72, ERp72)
[Mus musculus]
Length = 310
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +1
Query: 364 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITXFPTIKL 537
V + FYA WC + P +D + + + I + + L + FPT+ L
Sbjct: 84 VALLFYASWCPFSRSFRPSFDVISSLYSSIPHFAIKESSIKPSTLSKYGVHGFPTLLL 141
>At3g49800.1 68416.m05445 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 428
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 378 EFDEDLLSCVEDDFVKVGG 322
E DEDL++ + +DFV++GG
Sbjct: 99 EGDEDLIAGIRNDFVEIGG 117
>At5g65910.1 68418.m08296 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 432
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 390 PRSVEFDEDLLSCVEDDFVKVGG 322
P E DEDL++ +++DF ++GG
Sbjct: 80 PDHPEEDEDLIAGIKNDFAEIGG 102
>At4g29790.1 68417.m04242 expressed protein
Length = 1211
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 363 LLSCVEDDFVKVGGDEHFDGFGGPVRGQ--VLAQQMLLQGAVEERL 232
L + + +D V D FDGFG V + VL M G +RL
Sbjct: 748 LSALISEDSASVNEDLQFDGFGADVESEFSVLNHMMEFNGYRSDRL 793
>At3g30300.1 68416.m03826 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 677
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = -2
Query: 258 LQGAVEERLYEFLNSVRRQ------LITAGLVFGHVLFKGDQTG 145
+ GAV ERL E+ N+ + + L ++GL FGH G+ G
Sbjct: 606 VDGAVSERLKEYKNAEKEEDLDEEDLSSSGLFFGHKESGGNNNG 649
>At1g79350.1 68414.m09247 DNA-binding protein, putative contains Pfam
PF00628: PHD-finger domain; contains TIGRFAMS TIGR01053:
zinc finger domain, LSD1 subclass; contains Pfam PF00271:
Helicase conserved C-terminal domain; similar to WSSV086
(GI:19481678)[shrimp white spot syndrome virus]; similar
to nuclear protein Np95 (GI:17939938) [Mus musculus]
Length = 1299
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 240 ERLYEFLNSVRRQLITAGLVFGHVLFKGDQTGRW 139
E + EFL R L+ G+V VL G GR+
Sbjct: 988 ETVKEFLTKARAALVAVGIVRDSVLANGKDVGRF 1021
>At1g15720.1 68414.m01886 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 390
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 65 PSPSMPTNMNTKGSWSSSA*RRMRCHLPV*SPLN 166
P P + + S +S+ RR+R HLP PLN
Sbjct: 287 PQPDGANRTDAEDSEGTSSSRRVRPHLPTPEPLN 320
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 349 DTTKKVLVEFYAPWCGHCKQLVPIYDKL 432
+T V+V+FY CG CK + + KL
Sbjct: 118 ETNSLVVVDFYRTACGSCKYIEQGFSKL 145
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 349 DTTKKVLVEFYAPWCGHCKQLVPIYDKL 432
+T V+V+FY CG CK + + KL
Sbjct: 105 ETNSLVVVDFYRTACGSCKYIEQGFSKL 132
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 349 DTTKKVLVEFYAPWCGHCKQLVPIYDKL 432
+T V+V+FY CG CK + + KL
Sbjct: 105 ETNSLVVVDFYRTACGSCKYIEQGFSKL 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,009,066
Number of Sequences: 28952
Number of extensions: 229003
Number of successful extensions: 822
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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