Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0554
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061071-1|AAL28619.1| 250|Drosophila melanogaster LD04103p pro... 69 8e-12
AE014134-1054|AAF52345.2| 250|Drosophila melanogaster CG31641-P... 69 8e-12
AE014134-1053|AAN10581.1| 302|Drosophila melanogaster CG31641-P... 69 8e-12
BT001751-1|AAN71506.1| 257|Drosophila melanogaster RH02809p pro... 50 4e-06
AF202990-1|AAG35633.1| 254|Drosophila melanogaster STATHMIN-19 ... 50 4e-06
AF202989-1|AAG35632.1| 174|Drosophila melanogaster STATHMIN-13 ... 50 4e-06
AF202774-1|AAG35628.1| 257|Drosophila melanogaster stathmin-14 ... 50 4e-06
AF202773-1|AAG35627.1| 234|Drosophila melanogaster stathmin-1 p... 50 4e-06
AE014134-1052|AAN10580.1| 257|Drosophila melanogaster CG31641-P... 50 4e-06
AE014297-3298|ABI31199.1| 391|Drosophila melanogaster CG34111-P... 31 1.1
AY058734-1|AAL13963.1| 712|Drosophila melanogaster LP01469p pro... 29 8.0
AE014297-2288|AAF55374.2| 712|Drosophila melanogaster CG8907-PA... 29 8.0
>AY061071-1|AAL28619.1| 250|Drosophila melanogaster LD04103p
protein.
Length = 250
Score = 68.5 bits (160), Expect = 8e-12
Identities = 50/121 (41%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +2
Query: 89 LVRDSVMQCFCHSCRAP-VLPAGWEILDHEDTFXXXXXXXXXXXRTNTPVVILRLXXXXX 265
LVRDSVMQCFCH+CRAP +LPA + R+ P RL
Sbjct: 5 LVRDSVMQCFCHTCRAPGILPAV--------SRRSAPIKKNNKIRSKQP----RLSKKVK 52
Query: 266 XXXXXXXXXXXXXGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKXXXXXXXS 442
GGL+YEVILAEP V VP+R +P K SVEEI++KLK S
Sbjct: 53 FITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRIS 112
Query: 443 L 445
L
Sbjct: 113 L 113
>AE014134-1054|AAF52345.2| 250|Drosophila melanogaster CG31641-PA,
isoform A protein.
Length = 250
Score = 68.5 bits (160), Expect = 8e-12
Identities = 50/121 (41%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +2
Query: 89 LVRDSVMQCFCHSCRAP-VLPAGWEILDHEDTFXXXXXXXXXXXRTNTPVVILRLXXXXX 265
LVRDSVMQCFCH+CRAP +LPA + R+ P RL
Sbjct: 5 LVRDSVMQCFCHTCRAPGILPAV--------SRRSAPIKKNNKIRSKQP----RLSKKVK 52
Query: 266 XXXXXXXXXXXXXGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKXXXXXXXS 442
GGL+YEVILAEP V VP+R +P K SVEEI++KLK S
Sbjct: 53 FITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRIS 112
Query: 443 L 445
L
Sbjct: 113 L 113
>AE014134-1053|AAN10581.1| 302|Drosophila melanogaster CG31641-PB,
isoform B protein.
Length = 302
Score = 68.5 bits (160), Expect = 8e-12
Identities = 50/121 (41%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +2
Query: 89 LVRDSVMQCFCHSCRAP-VLPAGWEILDHEDTFXXXXXXXXXXXRTNTPVVILRLXXXXX 265
LVRDSVMQCFCH+CRAP +LPA + R+ P RL
Sbjct: 5 LVRDSVMQCFCHTCRAPGILPAV--------SRRSAPIKKNNKIRSKQP----RLSKKVK 52
Query: 266 XXXXXXXXXXXXXGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKXXXXXXXS 442
GGL+YEVILAEP V VP+R +P K SVEEI++KLK S
Sbjct: 53 FITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRIS 112
Query: 443 L 445
L
Sbjct: 113 L 113
>BT001751-1|AAN71506.1| 257|Drosophila melanogaster RH02809p
protein.
Length = 257
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 305 GGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKXXXXXXXSL 445
GGL+YEVILAEP V VP+R +P K SVEEI++KLK SL
Sbjct: 21 GGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISL 68
>AF202990-1|AAG35633.1| 254|Drosophila melanogaster STATHMIN-19
protein.
Length = 254
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 305 GGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKXXXXXXXSL 445
GGL+YEVILAEP V VP+R +P K SVEEI++KLK SL
Sbjct: 18 GGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISL 65
>AF202989-1|AAG35632.1| 174|Drosophila melanogaster STATHMIN-13
protein.
Length = 174
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 305 GGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKXXXXXXXSL 445
GGL+YEVILAEP V VP+R +P K SVEEI++KLK SL
Sbjct: 21 GGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISL 68
>AF202774-1|AAG35628.1| 257|Drosophila melanogaster stathmin-14
protein.
Length = 257
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 305 GGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKXXXXXXXSL 445
GGL+YEVILAEP V VP+R +P K SVEEI++KLK SL
Sbjct: 21 GGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISL 68
>AF202773-1|AAG35627.1| 234|Drosophila melanogaster stathmin-1
protein.
Length = 234
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 305 GGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKXXXXXXXSL 445
GGL+YEVILAEP V VP+R +P K SVEEI++KLK SL
Sbjct: 21 GGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISL 68
>AE014134-1052|AAN10580.1| 257|Drosophila melanogaster CG31641-PC,
isoform C protein.
Length = 257
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 305 GGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKXXXXXXXSL 445
GGL+YEVILAEP V VP+R +P K SVEEI++KLK SL
Sbjct: 21 GGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISL 68
>AE014297-3298|ABI31199.1| 391|Drosophila melanogaster CG34111-PA
protein.
Length = 391
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 354 TGTPTGSASITSYARPPFDIFLAAD 280
+G+PTG+ S +ARPP+ + LA D
Sbjct: 122 SGSPTGAGSAHRWARPPYRLLLARD 146
>AY058734-1|AAL13963.1| 712|Drosophila melanogaster LP01469p
protein.
Length = 712
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 179 YLHDQGFPNLLVKRVHGMSGRSTASPSPLRVPXQHG 72
+L +GF ++++KR+H +SG + SP + G
Sbjct: 627 WLRGKGFSDIIIKRLHTLSGEEIFALSPHTIESYFG 662
>AE014297-2288|AAF55374.2| 712|Drosophila melanogaster CG8907-PA
protein.
Length = 712
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 179 YLHDQGFPNLLVKRVHGMSGRSTASPSPLRVPXQHG 72
+L +GF ++++KR+H +SG + SP + G
Sbjct: 627 WLRGKGFSDIIIKRLHTLSGEEIFALSPHTIESYFG 662
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,202,421
Number of Sequences: 53049
Number of extensions: 483439
Number of successful extensions: 1396
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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