Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0552
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            29   0.20 
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    25   1.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   1.9  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 279 MSTVRLEFSLNTHTNMPSDMIQHRKH 202
           +S  RLE SLN  TN+P ++    KH
Sbjct: 258 VSLSRLELSLNRLTNLPPELFSEAKH 283


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 547 FPPSRKQSERTYLLKT 594
           FPPS+KQSE  Y  +T
Sbjct: 23  FPPSKKQSELPYCCQT 38


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 401 SRTPRNTTLNGCKLRILMKETQLQTSTLARYSRTVPERNGNLAFSA 538
           S T R+T      L ++  E + +    + YS   P R+GN+AFS+
Sbjct: 175 SATCRDTYGLPDSLSVMNGEDESRALCTSEYSDISPLRDGNIAFSS 220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 853,934
Number of Sequences: 2352
Number of extensions: 17444
Number of successful extensions: 47
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)