Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0550
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   3.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   6.5  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 523 NXKFTMLDINCVLPLHLIPGACGV 594
           N KFT LD++  L  HL+    G+
Sbjct: 37  NGKFTALDVDPTLCTHLLYAFVGL 60


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 517 LFNXKFTMLDINCVLPLHLIPGACGV 594
           L N KFT+ DI+  L  HLI    G+
Sbjct: 34  LNNGKFTVEDIDPTLCTHLIYSFVGL 59


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 735 MLVPNKINGXNWVG 776
           M VP  +NG  W+G
Sbjct: 389 MKVPYAVNGDQWIG 402


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 200 CIVGRNFGSYVTHETRHFIYFYLGQ 274
           C+ G     + TH T H  Y Y G+
Sbjct: 70  CLNGATCQDHTTHYTCHCPYGYTGK 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,145
Number of Sequences: 336
Number of extensions: 3205
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)