Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0550
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light ... 187 4e-47
CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein. 187 4e-47
CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein. 187 4e-47
BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain, LC... 187 4e-47
BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain, LC... 187 4e-47
BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain, LC... 187 4e-47
BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain, LC... 186 1e-46
AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of ne... 186 1e-46
CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein. 71 6e-12
CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein. 71 6e-12
BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light... 71 6e-12
BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light... 71 6e-12
AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing ... 71 6e-12
AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein pr... 71 6e-12
AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light... 71 6e-12
AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4, a... 69 1e-11
CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein. 69 3e-11
>U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light
chain 1 protein.
Length = 89
Score = 187 bits (456), Expect = 4e-47
Identities = 84/89 (94%), Positives = 88/89 (98%)
Frame = +2
Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein.
Length = 89
Score = 187 bits (456), Expect = 4e-47
Identities = 84/89 (94%), Positives = 88/89 (98%)
Frame = +2
Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein.
Length = 89
Score = 187 bits (456), Expect = 4e-47
Identities = 84/89 (94%), Positives = 88/89 (98%)
Frame = +2
Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 187 bits (456), Expect = 4e-47
Identities = 84/89 (94%), Positives = 88/89 (98%)
Frame = +2
Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 187 bits (456), Expect = 4e-47
Identities = 84/89 (94%), Positives = 88/89 (98%)
Frame = +2
Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 187 bits (456), Expect = 4e-47
Identities = 84/89 (94%), Positives = 88/89 (98%)
Frame = +2
Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain,
LC8-type 2 protein.
Length = 89
Score = 186 bits (452), Expect = 1e-46
Identities = 83/89 (93%), Positives = 88/89 (98%)
Frame = +2
Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
M DRKAVIKNADMSE+MQQDAVDCATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of
neuronal nitric oxide synthase protein.
Length = 89
Score = 186 bits (452), Expect = 1e-46
Identities = 83/89 (93%), Positives = 88/89 (98%)
Frame = +2
Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
M DRKAVIKNADMSE+MQQDAVDCATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 70.5 bits (165), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +2
Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+
Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67
Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
+WH ++G FG +THE ++ +Y Y G +A+ ++K
Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103
>CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 70.5 bits (165), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +2
Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+
Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67
Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
+WH ++G FG +THE ++ +Y Y G +A+ ++K
Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103
>BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light
polypeptide 4 protein.
Length = 105
Score = 70.5 bits (165), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +2
Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+
Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67
Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
+WH ++G FG +THE ++ +Y Y G +A+ ++K
Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103
>BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light
chain 4 protein.
Length = 105
Score = 70.5 bits (165), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +2
Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+
Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67
Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
+WH ++G FG +THE ++ +Y Y G +A+ ++K
Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103
>AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing
protein 27 protein.
Length = 105
Score = 70.5 bits (165), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +2
Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+
Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67
Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
+WH ++G FG +THE ++ +Y Y G +A+ ++K
Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103
>AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein
protein.
Length = 105
Score = 70.5 bits (165), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +2
Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+
Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67
Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
+WH ++G FG +THE ++ +Y Y G +A+ ++K
Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103
>AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light
chain 4 protein.
Length = 105
Score = 70.5 bits (165), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +2
Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+
Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67
Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
+WH ++G FG +THE ++ +Y Y G +A+ ++K
Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103
>AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4,
axonemal variant protein.
Length = 105
Score = 69.3 bits (162), Expect = 1e-11
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = +2
Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
K++ K +++++DM EEM+ ++ A EKF+ + AA IK+ DKK+
Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVGTMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67
Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
+WH ++G FG +THE ++ +Y Y G +A+ ++K
Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103
>CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 68.5 bits (160), Expect = 3e-11
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = +2
Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
K++ K +++++DM EEM+ + ++ A EKF+ + AA I + DKK+
Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMINETMDKKFGS 67
Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
+WH ++G FG +THE ++ +Y Y G +A+ ++K
Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,133,392
Number of Sequences: 237096
Number of extensions: 1844775
Number of successful extensions: 7015
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7006
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -