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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0550
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32944-1|AAB04149.1|   89|Homo sapiens cytoplasmic dynein light ...   187   4e-47
CR542128-1|CAG46925.1|   89|Homo sapiens DNCL1 protein.               187   4e-47
CR407672-1|CAG28600.1|   89|Homo sapiens DNCL1 protein.               187   4e-47
BC104245-1|AAI04246.1|   89|Homo sapiens dynein, light chain, LC...   187   4e-47
BC104244-1|AAI04245.1|   89|Homo sapiens dynein, light chain, LC...   187   4e-47
BC100289-1|AAI00290.1|   89|Homo sapiens dynein, light chain, LC...   187   4e-47
BC010744-1|AAH10744.1|   89|Homo sapiens dynein, light chain, LC...   186   1e-46
AF112997-1|AAP97230.1|   89|Homo sapiens protein inhibitor of ne...   186   1e-46
CR542177-1|CAG46974.1|  105|Homo sapiens DNAL4 protein.                71   6e-12
CR456487-1|CAG30373.1|  105|Homo sapiens DNAL4 protein.                71   6e-12
BT009847-1|AAP88849.1|  105|Homo sapiens dynein, axonemal, light...    71   6e-12
BC002968-1|AAH02968.1|  105|Homo sapiens dynein, axonemal, light...    71   6e-12
AY453399-1|AAS47516.1|  105|Homo sapiens proliferation-inducing ...    71   6e-12
AL035366-1|CAA23018.1|  105|Homo sapiens hypothetical protein pr...    71   6e-12
AL008583-1|CAA15429.1|  105|Homo sapiens dynein, axonemal, light...    71   6e-12
AK223349-1|BAD97069.1|  105|Homo sapiens dynein light chain 4, a...    69   1e-11
CR542195-1|CAG46992.1|  105|Homo sapiens DNAL4 protein.                69   3e-11

>U32944-1|AAB04149.1|   89|Homo sapiens cytoplasmic dynein light
           chain 1 protein.
          Length = 89

 Score =  187 bits (456), Expect = 4e-47
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = +2

Query: 35  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
           MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60

Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
           NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAILLFKSG 89


>CR542128-1|CAG46925.1|   89|Homo sapiens DNCL1 protein.
          Length = 89

 Score =  187 bits (456), Expect = 4e-47
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = +2

Query: 35  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
           MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60

Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
           NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAILLFKSG 89


>CR407672-1|CAG28600.1|   89|Homo sapiens DNCL1 protein.
          Length = 89

 Score =  187 bits (456), Expect = 4e-47
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = +2

Query: 35  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
           MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60

Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
           NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAILLFKSG 89


>BC104245-1|AAI04246.1|   89|Homo sapiens dynein, light chain,
           LC8-type 1 protein.
          Length = 89

 Score =  187 bits (456), Expect = 4e-47
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = +2

Query: 35  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
           MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60

Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
           NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAILLFKSG 89


>BC104244-1|AAI04245.1|   89|Homo sapiens dynein, light chain,
           LC8-type 1 protein.
          Length = 89

 Score =  187 bits (456), Expect = 4e-47
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = +2

Query: 35  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
           MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60

Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
           NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAILLFKSG 89


>BC100289-1|AAI00290.1|   89|Homo sapiens dynein, light chain,
           LC8-type 1 protein.
          Length = 89

 Score =  187 bits (456), Expect = 4e-47
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = +2

Query: 35  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
           MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60

Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
           NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAILLFKSG 89


>BC010744-1|AAH10744.1|   89|Homo sapiens dynein, light chain,
           LC8-type 2 protein.
          Length = 89

 Score =  186 bits (452), Expect = 1e-46
 Identities = 83/89 (93%), Positives = 88/89 (98%)
 Frame = +2

Query: 35  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
           M DRKAVIKNADMSE+MQQDAVDCATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
           NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAILLFKSG 89


>AF112997-1|AAP97230.1|   89|Homo sapiens protein inhibitor of
           neuronal nitric oxide synthase protein.
          Length = 89

 Score =  186 bits (452), Expect = 1e-46
 Identities = 83/89 (93%), Positives = 88/89 (98%)
 Frame = +2

Query: 35  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214
           M DRKAVIKNADMSE+MQQDAVDCATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301
           NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61  NFGSYVTHETKHFIYFYLGQVAILLFKSG 89


>CR542177-1|CAG46974.1|  105|Homo sapiens DNAL4 protein.
          Length = 105

 Score = 70.5 bits (165), Expect = 6e-12
 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +2

Query: 14  KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
           K++   K      +++++DM EEM+ + ++    A EKF+   + AA  IK+  DKK+  
Sbjct: 8   KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67

Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
           +WH ++G  FG  +THE ++ +Y Y  G +A+ ++K
Sbjct: 68  SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103


>CR456487-1|CAG30373.1|  105|Homo sapiens DNAL4 protein.
          Length = 105

 Score = 70.5 bits (165), Expect = 6e-12
 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +2

Query: 14  KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
           K++   K      +++++DM EEM+ + ++    A EKF+   + AA  IK+  DKK+  
Sbjct: 8   KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67

Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
           +WH ++G  FG  +THE ++ +Y Y  G +A+ ++K
Sbjct: 68  SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103


>BT009847-1|AAP88849.1|  105|Homo sapiens dynein, axonemal, light
           polypeptide 4 protein.
          Length = 105

 Score = 70.5 bits (165), Expect = 6e-12
 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +2

Query: 14  KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
           K++   K      +++++DM EEM+ + ++    A EKF+   + AA  IK+  DKK+  
Sbjct: 8   KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67

Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
           +WH ++G  FG  +THE ++ +Y Y  G +A+ ++K
Sbjct: 68  SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103


>BC002968-1|AAH02968.1|  105|Homo sapiens dynein, axonemal, light
           chain 4 protein.
          Length = 105

 Score = 70.5 bits (165), Expect = 6e-12
 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +2

Query: 14  KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
           K++   K      +++++DM EEM+ + ++    A EKF+   + AA  IK+  DKK+  
Sbjct: 8   KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67

Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
           +WH ++G  FG  +THE ++ +Y Y  G +A+ ++K
Sbjct: 68  SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103


>AY453399-1|AAS47516.1|  105|Homo sapiens proliferation-inducing
           protein 27 protein.
          Length = 105

 Score = 70.5 bits (165), Expect = 6e-12
 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +2

Query: 14  KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
           K++   K      +++++DM EEM+ + ++    A EKF+   + AA  IK+  DKK+  
Sbjct: 8   KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67

Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
           +WH ++G  FG  +THE ++ +Y Y  G +A+ ++K
Sbjct: 68  SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103


>AL035366-1|CAA23018.1|  105|Homo sapiens hypothetical protein
           protein.
          Length = 105

 Score = 70.5 bits (165), Expect = 6e-12
 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +2

Query: 14  KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
           K++   K      +++++DM EEM+ + ++    A EKF+   + AA  IK+  DKK+  
Sbjct: 8   KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67

Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
           +WH ++G  FG  +THE ++ +Y Y  G +A+ ++K
Sbjct: 68  SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103


>AL008583-1|CAA15429.1|  105|Homo sapiens dynein, axonemal, light
           chain 4 protein.
          Length = 105

 Score = 70.5 bits (165), Expect = 6e-12
 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +2

Query: 14  KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
           K++   K      +++++DM EEM+ + ++    A EKF+   + AA  IK+  DKK+  
Sbjct: 8   KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67

Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
           +WH ++G  FG  +THE ++ +Y Y  G +A+ ++K
Sbjct: 68  SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103


>AK223349-1|BAD97069.1|  105|Homo sapiens dynein light chain 4,
           axonemal variant protein.
          Length = 105

 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
 Frame = +2

Query: 14  KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
           K++   K      +++++DM EEM+   ++    A EKF+   + AA  IK+  DKK+  
Sbjct: 8   KDEADYKRLQTFPLVRHSDMPEEMRVGTMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67

Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
           +WH ++G  FG  +THE ++ +Y Y  G +A+ ++K
Sbjct: 68  SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103


>CR542195-1|CAG46992.1|  105|Homo sapiens DNAL4 protein.
          Length = 105

 Score = 68.5 bits (160), Expect = 3e-11
 Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
 Frame = +2

Query: 14  KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190
           K++   K      +++++DM EEM+ + ++    A EKF+   + AA  I +  DKK+  
Sbjct: 8   KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMINETMDKKFGS 67

Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295
           +WH ++G  FG  +THE ++ +Y Y  G +A+ ++K
Sbjct: 68  SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,133,392
Number of Sequences: 237096
Number of extensions: 1844775
Number of successful extensions: 7015
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7006
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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