BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0550 (800 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light ... 187 4e-47 CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein. 187 4e-47 CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein. 187 4e-47 BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain, LC... 187 4e-47 BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain, LC... 187 4e-47 BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain, LC... 187 4e-47 BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain, LC... 186 1e-46 AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of ne... 186 1e-46 CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein. 71 6e-12 CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein. 71 6e-12 BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light... 71 6e-12 BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light... 71 6e-12 AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing ... 71 6e-12 AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein pr... 71 6e-12 AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light... 71 6e-12 AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4, a... 69 1e-11 CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein. 69 3e-11 >U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light chain 1 protein. Length = 89 Score = 187 bits (456), Expect = 4e-47 Identities = 84/89 (94%), Positives = 88/89 (98%) Frame = +2 Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214 MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60 Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301 NFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89 >CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein. Length = 89 Score = 187 bits (456), Expect = 4e-47 Identities = 84/89 (94%), Positives = 88/89 (98%) Frame = +2 Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214 MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60 Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301 NFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89 >CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein. Length = 89 Score = 187 bits (456), Expect = 4e-47 Identities = 84/89 (94%), Positives = 88/89 (98%) Frame = +2 Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214 MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60 Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301 NFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89 >BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain, LC8-type 1 protein. Length = 89 Score = 187 bits (456), Expect = 4e-47 Identities = 84/89 (94%), Positives = 88/89 (98%) Frame = +2 Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214 MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60 Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301 NFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89 >BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain, LC8-type 1 protein. Length = 89 Score = 187 bits (456), Expect = 4e-47 Identities = 84/89 (94%), Positives = 88/89 (98%) Frame = +2 Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214 MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60 Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301 NFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89 >BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain, LC8-type 1 protein. Length = 89 Score = 187 bits (456), Expect = 4e-47 Identities = 84/89 (94%), Positives = 88/89 (98%) Frame = +2 Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214 MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPTWHCIVGR Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60 Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301 NFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89 >BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain, LC8-type 2 protein. Length = 89 Score = 186 bits (452), Expect = 1e-46 Identities = 83/89 (93%), Positives = 88/89 (98%) Frame = +2 Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214 M DRKAVIKNADMSE+MQQDAVDCATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGR Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60 Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301 NFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89 >AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of neuronal nitric oxide synthase protein. Length = 89 Score = 186 bits (452), Expect = 1e-46 Identities = 83/89 (93%), Positives = 88/89 (98%) Frame = +2 Query: 35 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 214 M DRKAVIKNADMSE+MQQDAVDCATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGR Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60 Query: 215 NFGSYVTHETRHFIYFYLGQVAILLFKSG 301 NFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89 >CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein. Length = 105 Score = 70.5 bits (165), Expect = 6e-12 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Frame = +2 Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190 K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+ Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67 Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295 +WH ++G FG +THE ++ +Y Y G +A+ ++K Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103 >CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein. Length = 105 Score = 70.5 bits (165), Expect = 6e-12 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Frame = +2 Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190 K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+ Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67 Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295 +WH ++G FG +THE ++ +Y Y G +A+ ++K Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103 >BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light polypeptide 4 protein. Length = 105 Score = 70.5 bits (165), Expect = 6e-12 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Frame = +2 Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190 K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+ Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67 Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295 +WH ++G FG +THE ++ +Y Y G +A+ ++K Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103 >BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light chain 4 protein. Length = 105 Score = 70.5 bits (165), Expect = 6e-12 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Frame = +2 Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190 K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+ Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67 Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295 +WH ++G FG +THE ++ +Y Y G +A+ ++K Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103 >AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing protein 27 protein. Length = 105 Score = 70.5 bits (165), Expect = 6e-12 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Frame = +2 Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190 K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+ Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67 Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295 +WH ++G FG +THE ++ +Y Y G +A+ ++K Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103 >AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein protein. Length = 105 Score = 70.5 bits (165), Expect = 6e-12 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Frame = +2 Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190 K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+ Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67 Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295 +WH ++G FG +THE ++ +Y Y G +A+ ++K Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103 >AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light chain 4 protein. Length = 105 Score = 70.5 bits (165), Expect = 6e-12 Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Frame = +2 Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190 K++ K +++++DM EEM+ + ++ A EKF+ + AA IK+ DKK+ Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67 Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295 +WH ++G FG +THE ++ +Y Y G +A+ ++K Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103 >AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4, axonemal variant protein. Length = 105 Score = 69.3 bits (162), Expect = 1e-11 Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 2/96 (2%) Frame = +2 Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190 K++ K +++++DM EEM+ ++ A EKF+ + AA IK+ DKK+ Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVGTMELCVTACEKFSNNNESAAKMIKETMDKKFGS 67 Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295 +WH ++G FG +THE ++ +Y Y G +A+ ++K Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103 >CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein. Length = 105 Score = 68.5 bits (160), Expect = 3e-11 Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 2/96 (2%) Frame = +2 Query: 14 KNKPKXKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNP 190 K++ K +++++DM EEM+ + ++ A EKF+ + AA I + DKK+ Sbjct: 8 KDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMINETMDKKFGS 67 Query: 191 TWHCIVGRNFGSYVTHETRHFIYFYL-GQVAILLFK 295 +WH ++G FG +THE ++ +Y Y G +A+ ++K Sbjct: 68 SWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 97,133,392 Number of Sequences: 237096 Number of extensions: 1844775 Number of successful extensions: 7015 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 6934 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7006 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9869080686 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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