Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0547
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7S7X4 Cluster: Predicted protein; n=1; Nematostella ve...    53   9e-06
UniRef50_Q7UMP9 Cluster: Chloromuconate cycloisomerase YkfB1; n=...    36   1.1  
UniRef50_UPI0000E46125 Cluster: PREDICTED: hypothetical protein,...    34   3.3  
UniRef50_Q04QG3 Cluster: Acyltransferase; n=4; Leptospira|Rep: A...    33   7.5  
UniRef50_A4HJK0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_O54330 Cluster: MutM protein; n=2; Streptococcus mutans...    33   9.9  
UniRef50_A1DCZ8 Cluster: C6 zinc finger domain protein; n=2; Tri...    33   9.9  
UniRef50_P60368 Cluster: Keratin-associated protein 10-2; n=64; ...    33   9.9  

>UniRef50_A7S7X4 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 279

 Score = 52.8 bits (121), Expect = 9e-06
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
 Frame = +3

Query: 18  LRIPTTEAELNSTFFKKQNCIPNMGTHYYYNMTRKMDCEEMLLWFALI--TDSELVGTGF 191
           + IP    E  +T + +  C+  MG HY+YN+++  DC+  L  F L+  T  ++ G G+
Sbjct: 166 MEIPLNVDEFRNTPWVEGECVRAMGVHYHYNISKTFDCDYALPVFLLVDKTSHKVHGFGW 225

Query: 192 QTIGKLNKKNLKDRNWFETVPGARRATELAIPHAPDCLRDWTEKYGVISM-HIYYTNKPW 368
               K+ K N     W E  P A     +     P+C+ D    Y V+S+ HIY+ N P 
Sbjct: 226 AVPLKVEKTN----RW-EHPPPAIFGRSIKEKDMPNCIVD----YPVVSVQHIYFKN-PL 275

Query: 369 EIRC 380
            I C
Sbjct: 276 AIGC 279


>UniRef50_Q7UMP9 Cluster: Chloromuconate cycloisomerase YkfB1; n=2;
           Planctomycetaceae|Rep: Chloromuconate cycloisomerase
           YkfB1 - Rhodopirellula baltica
          Length = 360

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 86  HGHTLLLQHDKKNGLRRNATVVCINHGQRTGWHRLSD 196
           +GHT+    D  NGL  N   +C        WHRLS+
Sbjct: 61  YGHTISAMSDALNGLSANDLAMCFEDTPENNWHRLSE 97


>UniRef50_UPI0000E46125 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: hypothetical protein, partial -
           Strongylocentrotus purpuratus
          Length = 291

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 22/82 (26%), Positives = 32/82 (39%)
 Frame = +2

Query: 44  TKQHFLQKTELHP*HGHTLLLQHDKKNGLRRNATVVCINHGQRTGWHRLSDHRETKQEKS 223
           T  HF+  T  +  H  +    ++  N  R N +  CIN+      H  S+H       +
Sbjct: 71  TSNHFINNTSNNTRHNTSNYFINNTSNNTRHNISNHCINNTSNNTKHNTSNHFINNTSNN 130

Query: 224 ERSKLV*NSSRGQTSNRAGNTT 289
            R     N S   TSN A + T
Sbjct: 131 IRHNTS-NHSSNNTSNNARHNT 151



 Score = 33.5 bits (73), Expect = 5.7
 Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 7/89 (7%)
 Frame = +2

Query: 44  TKQHFLQKTELHP*HGHTLLLQHDKKNGLRRNATVVCINHGQRTGWHRLSDHRETKQEKS 223
           T  HF+  T  +  H  +    ++  N  R N +  CIN       H  S+H       S
Sbjct: 119 TSNHFINNTSNNIRHNTSNHSSNNTSNNARHNTSNHCINTTSNNTRHNTSNHSSNNTSNS 178

Query: 224 ERSKL-------V*NSSRGQTSNRAGNTT 289
            R            N++R  TSN + N T
Sbjct: 179 TRHNTSNHFINNTSNNTRHNTSNHSSNNT 207


>UniRef50_Q04QG3 Cluster: Acyltransferase; n=4; Leptospira|Rep:
           Acyltransferase - Leptospira borgpetersenii serovar
           Hardjo-bovis (strain JB197)
          Length = 408

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
 Frame = -3

Query: 637 VLQFFCEIIIFERDFLVLSC*IW-----PALLLVFI 545
           +  FFC +++F+RDF    C +W     P LL ++I
Sbjct: 179 IFPFFCGLVLFKRDFFTRQCILWGLYLIPGLLRIYI 214


>UniRef50_A4HJK0 Cluster: Putative uncharacterized protein; n=1;
           Leishmania braziliensis|Rep: Putative uncharacterized
           protein - Leishmania braziliensis
          Length = 772

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 155 INHGQRTGWHRLSDHRET-KQEKSERSKLV*NSSRGQTSNRAGN 283
           I H   TG H L+   ET KQE  ++   V N SRG + +R+GN
Sbjct: 453 ILHANDTGRHILTTSSETRKQEHRQKPACVFNLSRGASPSRSGN 496


>UniRef50_O54330 Cluster: MutM protein; n=2; Streptococcus
           mutans|Rep: MutM protein - Streptococcus mutans
          Length = 898

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +3

Query: 138 MLLWFALITDSELVGTGFQTIGKLNKKNLKDRNWFET 248
           +L+ +AL+  SE + T FQ +GK+NKK + D  W +T
Sbjct: 711 LLISYALLGKSEYLDT-FQKLGKVNKKFMIDCGWEDT 746


>UniRef50_A1DCZ8 Cluster: C6 zinc finger domain protein; n=2;
           Trichocomaceae|Rep: C6 zinc finger domain protein -
           Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
           181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
           3700 / NRRL 181))
          Length = 438

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
 Frame = +2

Query: 152 CINHGQRTGWHRLSDHRETKQEKSERSKLV*NSSRGQTSNRAGN--------TTRP*LPT 307
           C  HG    + R    R T Q + +RS     SS       AGN        TT    P 
Sbjct: 61  CHRHGVACLYDRSEGQRPTAQTEPQRSSAPSPSSHPSQIALAGNHEAATAAATTELCSPP 120

Query: 308 RLDGEVRRYINAHLLHE*TLGNSL 379
           R +G    Y    LLH  T+G SL
Sbjct: 121 RWEGGYHAYTELRLLHHFTIGTSL 144


>UniRef50_P60368 Cluster: Keratin-associated protein 10-2; n=64;
           Coelomata|Rep: Keratin-associated protein 10-2 - Homo
           sapiens (Human)
          Length = 255

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = -1

Query: 231 DLSDFSCLVSLWSESRCQPVRCP*LMQTTVAFLRSPFFLSCCNNSVCPC*GCNSVF*RKC 52
           D  +  C +   + S C P  C  L+ T V+ + SP   + C  S C   GC S     C
Sbjct: 21  DCPESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQAACEPSACQS-GCTSSCTPSC 79

Query: 51  C 49
           C
Sbjct: 80  C 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,311,729
Number of Sequences: 1657284
Number of extensions: 14678190
Number of successful extensions: 34729
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34715
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)