Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0547
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY875940-1|AAW66668.1|  562|Homo sapiens arylsulfatase H protein.      34   0.63 
AB076348-1|BAD01535.1|  255|Homo sapiens keratin associated prot...    33   1.4  

>AY875940-1|AAW66668.1|  562|Homo sapiens arylsulfatase H protein.
          Length = 562

 Score = 33.9 bits (74), Expect = 0.63
 Identities = 22/79 (27%), Positives = 36/79 (45%)
 Frame = -2

Query: 428 YQSVQGWTWLYGITGLATNFPRFIRVVDVH*YNAVLLRPIS*AVRGVWYCQLCCSSGPWN 249
           Y   + +TWL G  GL TN   F +++    Y   L+        G W+  L C+S   +
Sbjct: 77  YNLNRAFTWLGGSGGLPTNETTFAKLLQHRGYRTGLI--------GKWHLGLSCASRNDH 128

Query: 248 CFKPVSIFQIFLV*FPYGL 192
           C+ P++    +    P+GL
Sbjct: 129 CYHPLNHGFHYFYGVPFGL 147


>AB076348-1|BAD01535.1|  255|Homo sapiens keratin associated protein
           protein.
          Length = 255

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = -1

Query: 231 DLSDFSCLVSLWSESRCQPVRCP*LMQTTVAFLRSPFFLSCCNNSVCPC*GCNSVF*RKC 52
           D  +  C +   + S C P  C  L+ T V+ + SP   + C  S C   GC S     C
Sbjct: 21  DCPESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQAACEPSACQS-GCTSSCTPSC 79

Query: 51  C 49
           C
Sbjct: 80  C 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,406,513
Number of Sequences: 237096
Number of extensions: 2241840
Number of successful extensions: 4955
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4955
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)