Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0546
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.79 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    24   1.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    24   1.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.3  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +3

Query: 582 WGCAGEGTCTGSHGPRLHVVGEGGTGXPR 668
           WGCA   + T   GPR       G   PR
Sbjct: 55  WGCARASSATTMGGPRYGRAAAQGMPYPR 83


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 291 RPTETVFFFLCDSVCLNTPYIGDFTLR 211
           R  + +F F C + C+N    G F +R
Sbjct: 311 RIQKALFLFACTNSCMNPVVYGVFNIR 337



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 527 RQASIKLSTFLLHLAIVNL 583
           R+   +++T L+HLAI +L
Sbjct: 82  RKTPSRINTMLMHLAIADL 100


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 291 RPTETVFFFLCDSVCLNTPYIGDFTLR 211
           R  + +F F C + C+N    G F +R
Sbjct: 311 RIQKALFLFACTNSCMNPVVYGVFNIR 337



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 527 RQASIKLSTFLLHLAIVNL 583
           R+   +++T L+HLAI +L
Sbjct: 82  RKTPSRINTMLMHLAIADL 100


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 262 QKKKNSFRWSWLCKND-CPHVNVRATSVPL 348
           QKK +  +W+W C N  C   +++  ++P+
Sbjct: 48  QKKSHPPQWTWQCINQRCERRHIKG-AIPV 76


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 404 ATRAAACLRTNSHTVMATCTVPLPSKTSAAQHISFSSTP 520
           AT + A L ++       C  P P  +  ++ +SF S P
Sbjct: 19  ATFSDAVLSSDEELFHQKCPKPAPIYSPVSKPVSFESLP 57


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 226 ANIRRI*TYAITQKKKNSFRW 288
           +N+  I  Y+I  K++NS  W
Sbjct: 140 SNLESIQIYSIKPKERNSNHW 160


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +1

Query: 568 CHCQFGAVPVKARAREATARGFTWLAK 648
           C   FG +PV     E     F+W +K
Sbjct: 203 CLTTFGLLPVNGVTSEKCNLTFSWYSK 229


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 226 ANIRRI*TYAITQKKKNSFRW 288
           +N+  I  Y+I  K++NS  W
Sbjct: 96  SNLESIQIYSIKPKERNSNHW 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,812
Number of Sequences: 336
Number of extensions: 3401
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)