Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0543
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83735-1|BAA12090.1| 309|Homo sapiens neutral calponin protein. 36 0.21
CR541831-1|CAG46630.1| 309|Homo sapiens CNN2 protein. 36 0.21
CR541810-1|CAG46609.1| 309|Homo sapiens CNN2 protein. 36 0.21
BC141833-1|AAI41834.1| 309|Homo sapiens calponin 2 protein. 36 0.21
BC141818-1|AAI41819.1| 309|Homo sapiens calponin 2 protein. 36 0.21
AK222924-1|BAD96644.1| 309|Homo sapiens calponin 2 isoform a va... 36 0.21
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 34 0.47
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 32 1.9
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 32 1.9
BC117154-1|AAI17155.1| 203|Homo sapiens chromosome 9 open readi... 32 2.5
BC117152-1|AAI17153.1| 203|Homo sapiens chromosome 9 open readi... 32 2.5
AY038048-1|AAK71497.1| 996|Homo sapiens SEZ6 protein. 32 2.5
AL592301-22|CAM19028.1| 203|Homo sapiens novel protein (FLJ3677... 32 2.5
AK223620-1|BAD97340.1| 994|Homo sapiens seizure related 6 homol... 32 2.5
AK094098-1|BAC04285.1| 203|Homo sapiens protein ( Homo sapiens ... 32 2.5
AK091522-1|BAC03684.1| 869|Homo sapiens protein ( Homo sapiens ... 32 2.5
AK054913-1|BAB70826.1| 320|Homo sapiens protein ( Homo sapiens ... 32 2.5
AF502129-1|AAM22213.1| 996|Homo sapiens HSEZ6b protein protein. 32 2.5
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 31 3.3
AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein. 31 4.4
AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein. 31 4.4
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 31 5.8
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 31 5.8
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 31 5.8
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 31 5.8
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 30 7.7
U59736-1|AAC50869.1| 812|Homo sapiens NFATc.b protein. 30 7.7
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 30 7.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 7.7
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 30 7.7
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 7.7
>D83735-1|BAA12090.1| 309|Homo sapiens neutral calponin protein.
Length = 309
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 219 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 317
CP GTV G GTG+C DP +VP YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305
>CR541831-1|CAG46630.1| 309|Homo sapiens CNN2 protein.
Length = 309
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 219 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 317
CP GTV G GTG+C DP +VP YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305
>CR541810-1|CAG46609.1| 309|Homo sapiens CNN2 protein.
Length = 309
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 219 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 317
CP GTV G GTG+C DP +VP YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305
>BC141833-1|AAI41834.1| 309|Homo sapiens calponin 2 protein.
Length = 309
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 219 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 317
CP GTV G GTG+C DP +VP YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305
>BC141818-1|AAI41819.1| 309|Homo sapiens calponin 2 protein.
Length = 309
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 219 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 317
CP GTV G GTG+C DP +VP YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305
>AK222924-1|BAD96644.1| 309|Homo sapiens calponin 2 isoform a
variant protein.
Length = 309
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 219 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 317
CP GTV G GTG+C DP +VP YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein.
Length = 1569
Score = 34.3 bits (75), Expect = 0.47
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVR--SPTLARSAVTLIPKIAVNITSVSRA 201
TT + AS +A++ T + P SPTL +S +P T+ R
Sbjct: 1304 TTRATASTASPATTSTAQSTTRTTMTLPTPATSGTSPTLPKSTNQELPGTTATQTTGPRP 1363
Query: 202 LPASTVAPSEPFSRSET-PTALVTAKTPKT 288
PAST P+ P T PTA T +T T
Sbjct: 1364 TPASTTGPTTPQPGQPTRPTATETTQTRTT 1393
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 32.3 bits (70), Expect = 1.9
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Frame = +1
Query: 28 TTESPAS-ACGLIRFRSAKTKK*QTDSAAQPPVRS----PTLARSAVTLIPKIAVNITSV 192
TTES S A R+A K T +A P V S P+ + T +P + T+
Sbjct: 1120 TTESTGSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTP 1179
Query: 193 SRA----LPASTVAPS-EPFSRSETPTALVTAKTPKTFPDARTT 309
+ +P+S++ + S++ TPTA ++ TP + P+ T
Sbjct: 1180 TATSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHT 1223
Score = 31.5 bits (68), Expect = 3.3
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +1
Query: 1 LSVQPRXLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVN 180
++ P T S + G + T T S A P SP A +A+ + A
Sbjct: 3075 VTAPPGSTATASSTQATAGTPHVSTTATTPTVTSSKATPS-SSPGTA-TALPALRSTATT 3132
Query: 181 ITSVS-RALPASTVAPS-EPFSRSETPTALVTAKTPKTFPD 297
T+ S A+P+S++ + S++ TPTA ++ TP + P+
Sbjct: 3133 PTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPE 3173
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVS-RAL 204
T S + G ++ ++ S+ P SP A +A+ + A T+ S A+
Sbjct: 1828 TASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTA-TALPALRSTATTPTATSVTAI 1886
Query: 205 PASTVAPS-EPFSRSETPTALVTAKTPKTFPD 297
P+S++ + S++ TPTA ++ TP + P+
Sbjct: 1887 PSSSLGTAWTRLSQTTTPTATMSTATPSSTPE 1918
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/104 (24%), Positives = 38/104 (36%)
Frame = +1
Query: 13 PRXLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSV 192
P T P+S+ G R ++T + P +P ++ L +
Sbjct: 650 PTATSFTAIPSSSLGTTWTRLSQTTTPMATMSTATPSSTPETVHTSTVLTTTATTTGATG 709
Query: 193 SRALPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTTMENWI 324
S A P+ST + T T TA TP + P T+ WI
Sbjct: 710 SVATPSSTPGTAHTTKVLTTTTTGFTA-TPSSSPGRARTLPVWI 752
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 32.3 bits (70), Expect = 1.9
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +1
Query: 13 PRXLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSV 192
P T S A G + T T S A P SP A +A+ + A T+
Sbjct: 552 PTGSTATASSTQAAGTPHVSTTATTPTVTSSKATPS-SSPGTA-TALPALRSTATTPTAT 609
Query: 193 S-RALPASTVAPS-EPFSRSETPTALVTAKTPKTFPD 297
S A+P+S++ + S++ TPTA ++ TP + P+
Sbjct: 610 SFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPE 646
>BC117154-1|AAI17155.1| 203|Homo sapiens chromosome 9 open reading
frame 163 protein.
Length = 203
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 107 LPSPR*GLQRWLVQPSRSSRRLP*ILHLSRGRCPRVRLP 223
LP P+ G+QRW++ R +R LP L+ + PR R P
Sbjct: 151 LPFPKRGMQRWMLPLRRGARLLP----LASSKNPRARSP 185
>BC117152-1|AAI17153.1| 203|Homo sapiens chromosome 9 open reading
frame 163 protein.
Length = 203
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 107 LPSPR*GLQRWLVQPSRSSRRLP*ILHLSRGRCPRVRLP 223
LP P+ G+QRW++ R +R LP L+ + PR R P
Sbjct: 151 LPFPKRGMQRWMLPLRRGARLLP----LASSKNPRARSP 185
>AY038048-1|AAK71497.1| 996|Homo sapiens SEZ6 protein.
Length = 996
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 27 YDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEG 200
+DR++ W+D+ P+C E++ G AP + A S + HP ++ C G
Sbjct: 816 HDRQAGSPKWSDRAPKCLLEQLKPCHGLSAP--ENGARSPEKQLHPAGATIHFSCAPG 871
>AL592301-22|CAM19028.1| 203|Homo sapiens novel protein (FLJ36779)
protein.
Length = 203
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 107 LPSPR*GLQRWLVQPSRSSRRLP*ILHLSRGRCPRVRLP 223
LP P+ G+QRW++ R +R LP L+ + PR R P
Sbjct: 151 LPFPKRGMQRWMLPLRRGARLLP----LASSKNPRARSP 185
>AK223620-1|BAD97340.1| 994|Homo sapiens seizure related 6 homolog
protein.
Length = 994
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 27 YDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEG 200
+DR++ W+D+ P+C E++ G AP + A S + HP ++ C G
Sbjct: 814 HDRQAGSPKWSDRAPKCLLEQLKPCHGLSAP--ENGARSPEKQLHPAGATIHFSCAPG 869
>AK094098-1|BAC04285.1| 203|Homo sapiens protein ( Homo sapiens
cDNA FLJ36779 fis, clone ADRGL2001352. ).
Length = 203
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 107 LPSPR*GLQRWLVQPSRSSRRLP*ILHLSRGRCPRVRLP 223
LP P+ G+QRW++ R +R LP L+ + PR R P
Sbjct: 151 LPFPKRGMQRWMLPLRRGARLLP----LASSKNPRARSP 185
>AK091522-1|BAC03684.1| 869|Homo sapiens protein ( Homo sapiens
cDNA FLJ34203 fis, clone FCBBF3019784, highly similar to
Mouse mRNA for seizure-related gene product 6 type 2
precursor. ).
Length = 869
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 27 YDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEG 200
+DR++ W+D+ P+C E++ G AP + A S + HP ++ C G
Sbjct: 689 HDRQAGSPKWSDRAPKCLLEQLKPCHGLSAP--ENGARSPEKQLHPAGATIHFSCAPG 744
>AK054913-1|BAB70826.1| 320|Homo sapiens protein ( Homo sapiens
cDNA FLJ30351 fis, clone BRACE2007641, highly similar to
Mouse mRNA for seizure-related gene product 6 type 2
precursor. ).
Length = 320
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 27 YDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEG 200
+DR++ W+D+ P+C E++ G AP + A S + HP ++ C G
Sbjct: 140 HDRQAGSPKWSDRAPKCLLEQLKPCHGLSAP--ENGARSPEKQLHPAGATIHFSCAPG 195
>AF502129-1|AAM22213.1| 996|Homo sapiens HSEZ6b protein protein.
Length = 996
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 27 YDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEG 200
+DR++ W+D+ P+C E++ G AP + A S + HP ++ C G
Sbjct: 816 HDRQAGSPKWSDRAPKCLLEQLKPCHGLSAP--ENGARSPEKQLHPAGATIHFSCAPG 871
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 31.5 bits (68), Expect = 3.3
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 67 FRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRS 246
F S + +T + + +P S + L K + ++ ++ R ST PS P +R+
Sbjct: 439 FTSTRLPTSETWLSNNSVIPTPLPGVSTIPLTMKPSSSLPTILRTSSKST-HPSPPTART 497
Query: 247 ETPTALVTAKTPKTFPDARTT-MENWI*RRSARVSSS 354
+ T++ T +TP T RTT + +W+ +S +++
Sbjct: 498 -SQTSVATTQTPTTLTTCRTTPITSWMTTQSTLTTTA 533
>AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 31.1 bits (67), Expect = 4.4
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 67 FRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRS 246
F S + +T + + +P S + L K + ++ ++ R ST PS P +R+
Sbjct: 416 FTSTRLPTSETWLSNNSVIPTPLPGVSTIPLTMKPSSSLPTILRTSSKST-HPSPPTART 474
Query: 247 ETPTALVTAKTPKTFPDARTT-MENWI*RRSARVSSS 354
+ T++ T +TP T RTT + +W+ +S +++
Sbjct: 475 -SETSVATTQTPTTLTTRRTTPITSWMTTQSTLTTTA 510
>AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 31.1 bits (67), Expect = 4.4
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 67 FRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRS 246
F S + +T + + +P S + L K + ++ ++ R ST PS P +R+
Sbjct: 416 FTSTRLPTSETWLSNNSVIPTPLPGVSTIPLTMKPSSSLPTILRTSSKST-HPSPPTART 474
Query: 247 ETPTALVTAKTPKTFPDARTT-MENWI*RRSARVSSS 354
+ T++ T +TP T RTT + +W+ +S +++
Sbjct: 475 -SETSVATTQTPTTLTTRRTTPITSWMTTQSTLTTTA 510
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 30.7 bits (66), Expect = 5.8
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 145 SAVTLIPKIAVNITSVSRALPASTVAPSEPFSR-SETPTALVTAKTPKTFPDARTT 309
S + L K + ++ ++ R ST PS P +R SETP A T +TP T RTT
Sbjct: 781 STIPLTMKPSSSLPTILRTSSKST-HPSPPTTRTSETPVA--TTQTPTTLTSRRTT 833
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 30.7 bits (66), Expect = 5.8
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 145 SAVTLIPKIAVNITSVSRALPASTVAPSEPFSR-SETPTALVTAKTPKTFPDARTT 309
S + L K + ++ ++ R ST PS P +R SETP A T +TP T RTT
Sbjct: 781 STIPLTMKPSSSLPTILRTSSKST-HPSPPTTRTSETPVA--TTQTPTTLTSRRTT 833
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 30.7 bits (66), Expect = 5.8
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 145 SAVTLIPKIAVNITSVSRALPASTVAPSEPFSR-SETPTALVTAKTPKTFPDARTT 309
S + L K + ++ ++ R ST PS P +R SETP A T +TP T RTT
Sbjct: 441 STIPLTMKPSSSLPTILRTSSKST-HPSPPTTRTSETPVA--TTQTPTTLTSRRTT 493
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 30.7 bits (66), Expect = 5.8
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 145 SAVTLIPKIAVNITSVSRALPASTVAPSEPFSR-SETPTALVTAKTPKTFPDARTT 309
S + L K + ++ ++ R ST PS P +R SETP A T +TP T RTT
Sbjct: 441 STIPLTMKPSSSLPTILRTSSKST-HPSPPTTRTSETPVA--TTQTPTTLTSRRTT 493
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 30.3 bits (65), Expect = 7.7
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVS-RAL 204
T S + G + T T S A P SP A +A+ + A T+ S A+
Sbjct: 299 TASSTQATAGTPHVSTTATTPTVTSSKATPS-SSPGTA-TALPALRSTATTPTATSFTAI 356
Query: 205 PASTVAPS-EPFSRSETPTALVTAKTPKTFPD 297
P+S++ + S++ TPTA ++ TP + P+
Sbjct: 357 PSSSLGTTWTRLSQTTTPTATMSTATPSSTPE 388
>U59736-1|AAC50869.1| 812|Homo sapiens NFATc.b protein.
Length = 812
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 193 SRALPASTVAPSEPFSRSETPTALVTAK--TPKTFPDARTTMENWI*RRSARVSSSPGSR 366
S + T P E F R L+++ +P T P A T E+W+ RS+R +S R
Sbjct: 194 SPCVSPKTTDPEEGFPRGLGACTLLSSPRHSPSTSPRASVTEESWLGARSSRPASPCNKR 253
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 40 PASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTV 219
PA++ + SA+T T + R+P A + P+ AV ++V+ A P +
Sbjct: 1265 PAASAAAMNLASARTPAIPT-AVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPT 1323
Query: 220 APSEPFSRSETPTAL 264
AP+ + + TP AL
Sbjct: 1324 APAVNLAGARTPAAL 1338
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 40 PASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTV 219
PA++ + SA+T T + R+P A + P+ AV ++V+ A P +
Sbjct: 2233 PAASAAAMNLASARTPAIPT-AVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPT 2291
Query: 220 APSEPFSRSETPTAL 264
AP+ + + TP AL
Sbjct: 2292 APAVNLAGARTPAAL 2306
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 40 PASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTV 219
PA++ + SA+T T + R+P A + P+ AV ++V+ A P +
Sbjct: 756 PAASAAAMNLASARTPAIPT-AVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPT 814
Query: 220 APSEPFSRSETPTAL 264
AP+ + + TP AL
Sbjct: 815 APAVNLAGARTPAAL 829
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 40 PASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTV 219
PA++ + SA+T T + R+P A + P+ AV ++V+ A P +
Sbjct: 2281 PAASAAAMNLASARTPAIPT-AVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPT 2339
Query: 220 APSEPFSRSETPTAL 264
AP+ + + TP AL
Sbjct: 2340 APAVNLAGARTPAAL 2354
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,272,936
Number of Sequences: 237096
Number of extensions: 2119926
Number of successful extensions: 7041
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7033
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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