Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0543
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 39 0.004
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 38 0.006
U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 32 0.50
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 31 0.66
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 31 0.66
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 31 0.66
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 31 1.2
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 30 1.5
Z49207-4|CAA89073.1| 195|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 30 1.5
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 2.7
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 3.5
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 3.5
Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical ... 29 4.7
AL031633-23|CAA21030.1| 188|Caenorhabditis elegans Hypothetical... 29 4.7
AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribo... 28 6.2
AC024845-2|AAF60851.1| 324|Caenorhabditis elegans Hypothetical ... 28 6.2
AC024200-15|AAF36011.1| 945|Caenorhabditis elegans Poly(adp-rib... 28 6.2
Z71185-14|CAA94912.1| 591|Caenorhabditis elegans Hypothetical p... 28 8.1
L11247-8|AAY86263.1| 196|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL021475-4|CAA16315.1| 591|Caenorhabditis elegans Hypothetical ... 28 8.1
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/101 (24%), Positives = 42/101 (41%)
Frame = +3
Query: 3 ISAAPXLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKY 182
+S + L YD ++ C W + EC +G C + G +S + E +
Sbjct: 147 LSCSTPLIYDPTNKKCSWKGMIDECSQ---VSGEYCESDGNISKS---------ECSNVF 194
Query: 183 YICLEGVAREYGCPIGTVFKIGDADGTGNCEDPEDVPGCED 305
+ C EG+A CP VF +C+ P++V C +
Sbjct: 195 FSCSEGIAHRRNCPANLVFN----PAISSCDWPKNVMDCSE 231
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
TT P+SA + T T S A SPTLA ++ T +P + S P
Sbjct: 584 TTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAP 643
Query: 208 AS----TVAPSEPFSRSETPTALVTAKTPKTFP 294
A+ T AP P S + PTA V +P T P
Sbjct: 644 ANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAP 676
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
TT P+SA + T T S A SPTLA ++ T +P + S P
Sbjct: 640 TTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAP 699
Query: 208 AS----TVAPSEPFSRSETPTALVTAKTPKTFP 294
A+ T AP P S + PTA V +P T P
Sbjct: 700 ANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAP 732
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/98 (30%), Positives = 42/98 (42%)
Frame = +3
Query: 6 SAAPXLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKYY 185
S LA+++ + C + +V C+N NG E S GSF A+ +C +Y
Sbjct: 1212 SCQSSLAFNQLTGKCDYPQKVSGCENHGQTNG-------ECSEHGSFIADAN--NCEVFY 1262
Query: 186 ICLEGVAREYGCPIGTVFKIGDADGTGNCEDPEDVPGC 299
C+ G CP GTVF C+ P VP C
Sbjct: 1263 RCVWGRKVVMTCPSGTVFN----PLLSVCDWPSAVPSC 1296
>U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical
protein F47E1.3 protein.
Length = 594
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 78 KNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEGVAREYGCPI 227
KNE V+NGF C G+V FS + + KY C++ R++ C I
Sbjct: 455 KNENVSNGFSCERCGKV-----FSYEYYRDKHLKYTRCVDNGNRKFPCTI 499
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 31.9 bits (69), Expect = 0.50
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Frame = +1
Query: 25 PTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTL---IPKIAVNITSVS 195
PTT A+ T + SA++ P+R+P A+SA P A +++
Sbjct: 358 PTTTRSAAPATRTAVPPRATAPPKAASASKAPIRAPIPAKSAPAPPRGAPAKAAKAEAIA 417
Query: 196 RALPASTV---APSEPFSRSETPTALVTAKT---PKTFPDA 300
+ A V APS+P S P A A T P T P+A
Sbjct: 418 QKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAPATAPEA 458
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 3 ISAAPXLAYDRESRVCMWADQVPECKNE-EVANGFGCPAPGEVSNAGS 143
+S L YD +S+ C+W V ECK + + +G G GE S S
Sbjct: 166 LSCPTPLFYDADSQKCIWKSLVEECKEDLTITDGSG-ETSGEGSGEAS 212
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 3 ISAAPXLAYDRESRVCMWADQVPECKNE-EVANGFGCPAPGEVSNAGS 143
+S L YD +S+ C+W V ECK + + +G G GE S S
Sbjct: 166 LSCPTPLFYDADSQKCIWKSLVEECKEDLTITDGSG-ETSGEGSGEAS 212
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.5 bits (68), Expect = 0.66
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
+TESP+S+ ++ + T +T S +PP S T ++ T P+ S P
Sbjct: 522 STESPSSSTTPVQ--TTTTTAPETTST-EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 578
Query: 208 A---STVAP----SEPFSRSETPTALVTAKTPKT 288
+T AP +EP S S TP T P+T
Sbjct: 579 VQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPET 612
Score = 31.1 bits (67), Expect = 0.87
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
+TESP+S+ ++ + T +T S +PP S T ++ T P+ S P
Sbjct: 246 STESPSSSTTPVQ--TTTTTAPETTST-EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 302
Query: 208 ASTV---AP----SEPFSRSETPTALVTAKTPKT 288
T AP +EP S S TP T P+T
Sbjct: 303 VQTTTITAPETTSTEPPSSSTTPVQTTTTTAPET 336
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
+TE P+S+ ++ + T +T S +PP S T ++ T P+ S P
Sbjct: 545 STEPPSSSTTPVQ--TTTTTAPETTST-EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 601
Query: 208 A---STVAP----SEPFSRSETPTALVTAKTPKT 288
+T AP +EP S S TP T P+T
Sbjct: 602 VQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPET 635
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
+TE P+S+ ++ + T +T S +PP S T ++ T P+ S P
Sbjct: 568 STEPPSSSTTPVQ--TTTTTAPETTST-EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 624
Query: 208 A---STVAP----SEPFSRSETPTALVTAKTPKT 288
+T AP +EP S S TP T P+T
Sbjct: 625 VQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPET 658
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
+TE P+S+ ++ + T +T S +PP S T ++ T P+ S P
Sbjct: 591 STEPPSSSTTPVQ--TTTTTAPETTST-EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 647
Query: 208 A---STVAP----SEPFSRSETPTALVTAKTPKT 288
+T AP +EP S S TP T P+T
Sbjct: 648 VQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPET 681
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
+TE P+S+ ++ + T +T S +PP S T ++ T P+ S P
Sbjct: 315 STEPPSSSTTPVQ--TTTTTAPETTST-EPPSSSTTPVQTTTTTAPETTRTEPPSSSTTP 371
Query: 208 A---STVAP----SEPFSRSETPTALVTAKTPKT 288
+T AP +EP S S TP T P+T
Sbjct: 372 VQNTTTTAPETTSTEPPSSSTTPVQTTTTTAPET 405
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
+TE P+S+ ++ + T +T S +PP S T ++ T P+ S P
Sbjct: 430 STEPPSSSTTPVQ--TTTTTAPETTST-EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 486
Query: 208 ASTV---AP----SEPFSRSETPTALVTAKTPKT 288
T AP +EP S S TP T P+T
Sbjct: 487 VQTTTITAPETTSTEPPSSSTTPVQTTTTTAPET 520
Score = 28.7 bits (61), Expect = 4.7
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
+TE+P+S+ ++ + T +T S +PP S + ++ T P+ S P
Sbjct: 154 STEAPSSSTTPVQ--TTTTTAPETTST-EPPSSSTSPVQTTTTTAPETTSTEPPSSSTTP 210
Query: 208 A---STVAP----SEPFSRSETPTALVTAKTPKT 288
+T AP +EP S S TP T P+T
Sbjct: 211 VQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPET 244
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Frame = +1
Query: 31 TESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPA 210
TE P+S+ ++ + T +T S +PP S T ++ T P+ S P
Sbjct: 362 TEPPSSSTTPVQ--NTTTTAPETTST-EPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPV 418
Query: 211 STV---AP----SEPFSRSETPTALVTAKTPKT 288
T AP +EP S S TP T P+T
Sbjct: 419 QTTTITAPETTSTEPPSSSTTPVQTTTTTAPET 451
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
+TE P+S+ ++ + T +T S +PP S T ++ T P+ S P
Sbjct: 752 STEPPSSSTTPVQ--TTTTTAPETTST-EPPSSSNTPVQTTTTTAPETTSTEPPSSSTSP 808
Query: 208 ASTV---AP----SEPFSRSETPTALVTAKTPKT 288
T AP +EP S S TP T P+T
Sbjct: 809 VQTTTITAPETTSTEPPSSSNTPVQTTTTTAPET 842
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +1
Query: 28 TTESPASACGLIRFRSA---KTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSV-S 195
+TE P+S+ ++ + +T + S++ PV++ T+ T + + T V +
Sbjct: 844 STEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQT 903
Query: 196 RALPASTVAPSEPFSRSETPTALVTAKTPKT 288
A +EP S S TP T P+T
Sbjct: 904 TTTTAPETTSTEPPSSSTTPVQTTTITAPET 934
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 162 PEDCRKYYICLEGVAREYGCPIGTVFKIGDADGTGNCEDPE 284
P DC K+ C+ G++ + CP G F AD T C+ P+
Sbjct: 575 PSDCLKFIRCVNGISYNFECPNGLSF---HAD-TMMCDRPD 611
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/87 (21%), Positives = 31/87 (35%)
Frame = +1
Query: 28 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
TTESP + + T + + + +PT T I T+ + +
Sbjct: 238 TTESPTTEASTTTTEAPTTTTSEEVTTTEITTEAPTTTEEVTTTETTIEAQTTTTTERMS 297
Query: 208 ASTVAPSEPFSRSETPTALVTAKTPKT 288
ST S + T T T + P+T
Sbjct: 298 PSTTKTSTTTTAKPTTTRSTTTQRPQT 324
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 115 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTPKTF 291
P +S T+ +A T+ K IT + ST+ SEP S SET + +T T T+
Sbjct: 662 PTEKSTTVDYTATTVSTKSHSTITVTEPSSKKSTLT-SEPTSSSETRSTALTLSTESTY 719
>Z49207-4|CAA89073.1| 195|Caenorhabditis elegans Hypothetical
protein R07E3.7 protein.
Length = 195
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 58 LIRFRSAKTK-K*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 207
LI F ++K K Q S A+P R PT A S + + PKI I +++ A P
Sbjct: 15 LILFFCIRSKDKKQPPSPAEPNRRLPTRAESTIGIRPKIPNPIYTINTASP 65
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +1
Query: 169 IAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTP 282
IA N TSVS + P S V + S TPT L KTP
Sbjct: 512 IATN-TSVSSSTPRSVVRTTSTSSVPTTPTGLAAPKTP 548
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = +1
Query: 97 TDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAK 276
T ++ +P V TLA T + IA + T+V + +T EP + +E+ T T K
Sbjct: 215 TTTSVEPSVS--TLASEDETTVTAIAESTTTVIAEVSTTT---EEPTTTAESTTKKSTTK 269
Query: 277 TPKTFPDARTTMENWI*RRSARVSSSPGS 363
P T + T + A S++ S
Sbjct: 270 APATTEEPTPTTTEEVTTTEAETSTTTSS 298
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 SVQPRXLPTTESPASA--CGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAV 177
+ +P T SP+++ + S+ + T ++ + SP+ + T P +
Sbjct: 441 TTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTST 500
Query: 178 NITSVSRALPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 309
S S + P+ST + S + S T ++ T ++ T TT
Sbjct: 501 TGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSETTT 544
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 SVQPRXLPTTESPASA--CGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAV 177
+ +P T SP+++ + S+ + T ++ + SP+ + T P +
Sbjct: 441 TTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTST 500
Query: 178 NITSVSRALPASTVAPSEPFSRSETPTALVTAKTPKTFPDARTT 309
S S + P+ST + S + S T ++ T ++ T TT
Sbjct: 501 TGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSETTT 544
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 127 SPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTPKTFPDART 306
+PT + T+ K + + ++ P+ P + TPT T K+ T P T
Sbjct: 246 TPTTPTTPTTM--KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPT 303
Query: 307 TMEN 318
TM++
Sbjct: 304 TMKS 307
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 127 SPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTPKTFPDART 306
+PT + T+ K + + ++ P+ P + TPT T K+ T P T
Sbjct: 360 TPTTPTTPTTM--KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPT 417
Query: 307 TMEN 318
TM++
Sbjct: 418 TMKS 421
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 127 SPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTPKTFPDART 306
+PT + T+ K + ++ P + P+ S TPT T K+ T P T
Sbjct: 272 TPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 329
Query: 307 TMEN 318
TM++
Sbjct: 330 TMKS 333
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 103 SAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVA-PSEPFSRSETPTALVTAKT 279
S P T+ + T + T + P + + P+ P + TPT T T
Sbjct: 359 STPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTT 418
Query: 280 PKTFPDARTTMEN 318
K+ P TTM++
Sbjct: 419 MKSTPTTPTTMKS 431
>Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 130 PTLARSAVTLIPKIAVNITSV-SRALPASTVAPSEPFSRSETPTALVTAKT 279
P +A + +L +VN +S S P+S++ S P SR P+A +AK+
Sbjct: 726 PVVAMAEASLCSSSSVNPSSYPSSHRPSSSILSSSPGSRISAPSAASSAKS 776
>AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 130 PTLARSAVTLIPKIAVNITSV-SRALPASTVAPSEPFSRSETPTALVTAKT 279
P +A + +L +VN +S S P+S++ S P SR P+A +AK+
Sbjct: 726 PVVAMAEASLCSSSSVNPSSYPSSHRPSSSILSSSPGSRISAPSAASSAKS 776
>AL031633-23|CAA21030.1| 188|Caenorhabditis elegans Hypothetical
protein Y39A1A.21a protein.
Length = 188
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 103 SAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPS 228
SAA P +P L R + +P + +VSRAL +T + S
Sbjct: 19 SAAAIPFVAPALRRVCIPYVPATTEQLANVSRALSLATSSNS 60
>AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-1 protein.
Length = 945
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 282 EDVPGCEDYYGELDLKAIRKSELLAGLQADGQ-PRPNQPKQLKPRPPK 422
ED+PG DY +KA+ E + L A + P P P PP+
Sbjct: 167 EDIPGWADYEENFKIKAV--GEYVEALAAKRRSTEPATPASASPTPPE 212
>AC024845-2|AAF60851.1| 324|Caenorhabditis elegans Hypothetical
protein Y65B4BL.4 protein.
Length = 324
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 118 PVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTPKTFPD 297
P R P ++A+ K +VN+ S A+ +PS P S TA T P T
Sbjct: 233 PFRRPIRKQTALRFQGKASVNLFSDLTAVTNELGSPSSPSSNCVISTA--TTSIPSTSTS 290
Query: 298 ARTT 309
+ TT
Sbjct: 291 STTT 294
>AC024200-15|AAF36011.1| 945|Caenorhabditis elegans
Poly(adp-ribose) metabolism enzymeprotein 1 protein.
Length = 945
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 282 EDVPGCEDYYGELDLKAIRKSELLAGLQADGQ-PRPNQPKQLKPRPPK 422
ED+PG DY +KA+ E + L A + P P P PP+
Sbjct: 167 EDIPGWADYEENFKIKAV--GEYVEALAAKRRSTEPATPASASPTPPE 212
>Z71185-14|CAA94912.1| 591|Caenorhabditis elegans Hypothetical
protein Y32F6B.2 protein.
Length = 591
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -2
Query: 269 VTSAVGVSDLENGSDGATVLAGNALETDVIFTAIFGMSVTAERASVGDLTGGWAAESVC 93
+T + +SD GAT +A + FT++FG+ V + VG + G +C
Sbjct: 63 ITEVLAISD---DVAGATFMAAGGSAPE-FFTSLFGVFVAQDNVGVGTIVGSATFNILC 117
>L11247-8|AAY86263.1| 196|Caenorhabditis elegans Hypothetical
protein F09G8.10 protein.
Length = 196
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +1
Query: 118 PVRSPTLARSAVTLIPKIAVNITSVSRALPAST--VAPSEPFSRSETPTALVTAKTPKTF 291
PVR PT + L P+ V S LPAS+ P +P S+ + T T
Sbjct: 104 PVRKPTTETTKEDLEPEKKVKFALPSPELPASSPPPKPQKPKLPSQKIAPITVQPTIVTI 163
Query: 292 PD 297
PD
Sbjct: 164 PD 165
>AL021475-4|CAA16315.1| 591|Caenorhabditis elegans Hypothetical
protein Y32F6B.2 protein.
Length = 591
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -2
Query: 269 VTSAVGVSDLENGSDGATVLAGNALETDVIFTAIFGMSVTAERASVGDLTGGWAAESVC 93
+T + +SD GAT +A + FT++FG+ V + VG + G +C
Sbjct: 63 ITEVLAISD---DVAGATFMAAGGSAPE-FFTSLFGVFVAQDNVGVGTIVGSATFNILC 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,405,278
Number of Sequences: 27780
Number of extensions: 318189
Number of successful extensions: 1154
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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