Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0542
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.2  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   3.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   5.5  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   7.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = -2

Query: 426 SRFVKNSGTAVLIVKYMSSLRLVFSKENLQPRRKVMMRWSSNS 298
           +R  K +G  + ++ + S+L      ENL   + ++  W++ S
Sbjct: 408 TRLYKKAGKEIPVILWTSTLTQKEYLENLPSDKYIIQIWTTGS 450



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 52  YIFWNKVFEN 23
           YI W KV+EN
Sbjct: 492 YIGWQKVYEN 501


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 138 LSTENQTKPR*LWSSQPVKCGRRSAR 215
           L T+ ++KP    + QPV   RR+AR
Sbjct: 35  LLTKKKSKPGGKTAPQPVAVARRNAR 60


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 202 EDPRGAERKRGDQRLRPRPH 261
           E PR  + +R ++  RPRP+
Sbjct: 316 ERPRATDHQRRNEPKRPRPN 335


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/47 (21%), Positives = 23/47 (48%)
 Frame = +2

Query: 20  VIFKYFIPKNISYCAFQSANTLRPSASVYVVQTLASDLIFEYREPNE 160
           V+F  F+P ++SY  F     +  +     +  + SD+  ++ + N+
Sbjct: 173 VLFYPFLPSDVSYNLFSFVPLVVNALDHLFLNDILSDICDKFEQINQ 219


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/47 (21%), Positives = 23/47 (48%)
 Frame = +2

Query: 20  VIFKYFIPKNISYCAFQSANTLRPSASVYVVQTLASDLIFEYREPNE 160
           V+F  F+P ++SY  F     +  +     +  + SD+  ++ + N+
Sbjct: 129 VLFYPFLPSDVSYNLFSFVPLVVNALDHLFLNDILSDICDKFEQINQ 175


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 235 DQRLRPRPHQGVAEEG 282
           D+  RP PH  V  EG
Sbjct: 124 DEPFRPHPHNLVGREG 139


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 88  SKCQCIRCSDF 120
           ++C+C +C DF
Sbjct: 123 AECKCYKCGDF 133


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +3

Query: 27  SNTLFQKIYRIVPFNLQTRCVQVPVYTLFRLWLVT*YLSTENQT 158
           S+TL +  YR + FN+     +V  +     W+    ++ EN T
Sbjct: 82  SSTLLKFPYRSIKFNIPDEKNEVNDFLREISWIFLETVANENTT 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,912
Number of Sequences: 336
Number of extensions: 3631
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)