Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0542
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open readin... 60 1e-08
Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open readin... 60 1e-08
Z97053-4|CAO03543.1| 154|Homo sapiens chromosome 20 open readin... 60 1e-08
BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open read... 60 1e-08
AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open read... 60 1e-08
AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open read... 60 1e-08
AL132772-7|CAO03334.1| 154|Homo sapiens chromosome 20 open read... 60 1e-08
AK091641-1|BAC03711.1| 167|Homo sapiens protein ( Homo sapiens ... 47 7e-05
BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding p... 46 1e-04
BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding p... 46 1e-04
AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetic... 46 1e-04
BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding p... 44 4e-04
AY094971-1|AAM15733.1| 354|Homo sapiens cellular retinaldehyde-... 44 4e-04
L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding pro... 33 1.3
J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein. 33 1.3
BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding p... 33 1.3
U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer... 32 1.7
D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer... 32 1.7
BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha) tran... 32 1.7
>Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 59.7 bits (138), Expect = 1e-08
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +2
Query: 203 KIREELNENVETRDSDLAHIKEWLKKE-PHLPDEFDDQRIMTFLRGCKFSLEKTKRKLDM 379
K REEL E E R D+ +++ ++KE P+L DD ++ FLR KF ++ + L
Sbjct: 42 KAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVN 101
Query: 380 YFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRVVIMR 523
Y + R + PE F N +K L+++L+ LP P G VV +R
Sbjct: 102 YHSCRRSWPEVFNN--LKPSALKDVLASGFLTVLPHTDPRGCHVVCIR 147
>Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 59.7 bits (138), Expect = 1e-08
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +2
Query: 203 KIREELNENVETRDSDLAHIKEWLKKE-PHLPDEFDDQRIMTFLRGCKFSLEKTKRKLDM 379
K REEL E E R D+ +++ ++KE P+L DD ++ FLR KF ++ + L
Sbjct: 42 KAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVN 101
Query: 380 YFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRVVIMR 523
Y + R + PE F N +K L+++L+ LP P G VV +R
Sbjct: 102 YHSCRRSWPEVFNN--LKPSALKDVLASGFLTVLPHTDPRGCHVVCIR 147
>Z97053-4|CAO03543.1| 154|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 154
Score = 59.7 bits (138), Expect = 1e-08
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +2
Query: 203 KIREELNENVETRDSDLAHIKEWLKKE-PHLPDEFDDQRIMTFLRGCKFSLEKTKRKLDM 379
K REEL E E R D+ +++ ++KE P+L DD ++ FLR KF ++ + L
Sbjct: 42 KAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVN 101
Query: 380 YFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRVVIMR 523
Y + R + PE F N +K L+++L+ LP P G VV +R
Sbjct: 102 YHSCRRSWPEVFNN--LKPSALKDVLASGFLTVLPHTDPRGCHVVCIR 147
>BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 59.7 bits (138), Expect = 1e-08
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +2
Query: 203 KIREELNENVETRDSDLAHIKEWLKKE-PHLPDEFDDQRIMTFLRGCKFSLEKTKRKLDM 379
K REEL E E R D+ +++ ++KE P+L DD ++ FLR KF ++ + L
Sbjct: 42 KAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVN 101
Query: 380 YFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRVVIMR 523
Y + R + PE F N +K L+++L+ LP P G VV +R
Sbjct: 102 YHSCRRSWPEVFNN--LKPSALKDVLASGFLTVLPHTDPRGCHVVCIR 147
>AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 59.7 bits (138), Expect = 1e-08
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +2
Query: 203 KIREELNENVETRDSDLAHIKEWLKKE-PHLPDEFDDQRIMTFLRGCKFSLEKTKRKLDM 379
K REEL E E R D+ +++ ++KE P+L DD ++ FLR KF ++ + L
Sbjct: 42 KAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVN 101
Query: 380 YFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRVVIMR 523
Y + R + PE F N +K L+++L+ LP P G VV +R
Sbjct: 102 YHSCRRSWPEVFNN--LKPSALKDVLASGFLTVLPHTDPRGCHVVCIR 147
>AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 59.7 bits (138), Expect = 1e-08
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +2
Query: 203 KIREELNENVETRDSDLAHIKEWLKKE-PHLPDEFDDQRIMTFLRGCKFSLEKTKRKLDM 379
K REEL E E R D+ +++ ++KE P+L DD ++ FLR KF ++ + L
Sbjct: 42 KAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVN 101
Query: 380 YFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRVVIMR 523
Y + R + PE F N +K L+++L+ LP P G VV +R
Sbjct: 102 YHSCRRSWPEVFNN--LKPSALKDVLASGFLTVLPHTDPRGCHVVCIR 147
>AL132772-7|CAO03334.1| 154|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 154
Score = 59.7 bits (138), Expect = 1e-08
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +2
Query: 203 KIREELNENVETRDSDLAHIKEWLKKE-PHLPDEFDDQRIMTFLRGCKFSLEKTKRKLDM 379
K REEL E E R D+ +++ ++KE P+L DD ++ FLR KF ++ + L
Sbjct: 42 KAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVN 101
Query: 380 YFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRVVIMR 523
Y + R + PE F N +K L+++L+ LP P G VV +R
Sbjct: 102 YHSCRRSWPEVFNN--LKPSALKDVLASGFLTVLPHTDPRGCHVVCIR 147
>AK091641-1|BAC03711.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ34322 fis, clone FEBRA2008861, weakly similar to
CELLULAR RETINALDEHYDE-BINDING PROTEIN. ).
Length = 167
Score = 46.8 bits (106), Expect = 7e-05
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Frame = +2
Query: 161 AKMTLEQP--AGEMWQKIREELNENVETRDSDLAHIKEWLKKEPHLPD-EFDDQRIMTFL 331
AKMT Q + E +K R ELNEN + D+ +++ + P + DD I+ FL
Sbjct: 21 AKMTHLQAGLSPETIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFL 80
Query: 332 RGCKFSLEKTKRKLDMYFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRV 511
R KF R L YF R + F N P ++ L L GR++
Sbjct: 81 RARKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLENRDHYGRKI 140
Query: 512 VIMRGLDKDAATPN 553
+++ + D TP+
Sbjct: 141 LLLFAANWDQRTPS 154
>BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +2
Query: 191 EMWQKIREELNENVETRDSDLAHIKEWLKKEPHLPD-EFDDQRIMTFLRGCKFSLEKTKR 367
E +K R ELNEN +T D+ +++ + P + DD I+ FLR KF + R
Sbjct: 11 ETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFR 70
Query: 368 KLDMYFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRVVIMRGLDKDAAT 547
L YF R + F + P +++ L L + GR+++++ + D +
Sbjct: 71 LLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAANWDQSR 130
Query: 548 PNVADAFK 571
+ D +
Sbjct: 131 YTLVDILR 138
>BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +2
Query: 191 EMWQKIREELNENVETRDSDLAHIKEWLKKEPHLPD-EFDDQRIMTFLRGCKFSLEKTKR 367
E +K R ELNEN +T D+ +++ + P + DD I+ FLR KF + R
Sbjct: 11 ETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFR 70
Query: 368 KLDMYFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRVVIMRGLDKDAAT 547
L YF R + F + P +++ L L + GR+++++ + D +
Sbjct: 71 LLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAANWDQSR 130
Query: 548 PNVADAFK 571
+ D +
Sbjct: 131 YTLVDILR 138
>AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 327
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +2
Query: 191 EMWQKIREELNENVETRDSDLAHIKEWLKKEPHLPD-EFDDQRIMTFLRGCKFSLEKTKR 367
E +K R ELNEN +T D+ +++ + P + DD I+ FLR KF + R
Sbjct: 11 ETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFR 70
Query: 368 KLDMYFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRVVIMRGLDKDAAT 547
L YF R + F + P +++ L L + GR+++++ + D +
Sbjct: 71 LLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAANWDQSR 130
Query: 548 PNVADAFK 571
+ D +
Sbjct: 131 YTLVDILR 138
>BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding
protein 1-like 1 protein.
Length = 354
Score = 44.4 bits (100), Expect = 4e-04
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Frame = +2
Query: 161 AKMTLEQP--AGEMWQKIREELNENVETRDSDLAHIKEWLKKEPHLPD-EFDDQRIMTFL 331
AKMT Q + E +K R ELNEN + D+ +++ + P + DD I+ FL
Sbjct: 21 AKMTHLQAGLSPETIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFL 80
Query: 332 RGCKFSLEKTKRKLDMYFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRV 511
R KF R L YF R + F N P ++ L L GR++
Sbjct: 81 RARKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLENRDHYGRKI 140
Query: 512 VIMRGLDKDAATPNVADAFKLAFMMGDV 595
+++ + D + + D + + +V
Sbjct: 141 LLLFAANWDQSRNSFTDILRAILLSLEV 168
>AY094971-1|AAM15733.1| 354|Homo sapiens cellular
retinaldehyde-binding protein-like protein protein.
Length = 354
Score = 44.4 bits (100), Expect = 4e-04
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Frame = +2
Query: 161 AKMTLEQP--AGEMWQKIREELNENVETRDSDLAHIKEWLKKEPHLPD-EFDDQRIMTFL 331
AKMT Q + E +K R ELNEN + D+ +++ + P + DD I+ FL
Sbjct: 21 AKMTHLQAGLSPETIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFL 80
Query: 332 RGCKFSLEKTKRKLDMYFTMRTAVPEFFTNRDVKRPELQEILSLVQTPALPGITPEGRRV 511
R KF R L YF R + F N P ++ L L GR++
Sbjct: 81 RARKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLENRDHYGRKI 140
Query: 512 VIMRGLDKDAATPNVADAFKLAFMMGDV 595
+++ + D + + D + + +V
Sbjct: 141 LLLFAANWDQSRNSFTDILRAILLSLEV 168
>L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding
protein protein.
Length = 317
Score = 32.7 bits (71), Expect = 1.3
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Frame = +2
Query: 200 QKIREELNENVETRDSDLAHIKEWLKKEPHLPDEF-----------DDQRIMTFLRGCKF 346
QK ++ELNE ETR+ + ++E ++ + +E D + F+R KF
Sbjct: 46 QKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKF 105
Query: 347 SLEKTKRKLDMYFTMRTAVPEFF 415
++ + L Y R PE F
Sbjct: 106 NVGRAYELLRGYVNFRLQYPELF 128
>J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein.
Length = 317
Score = 32.7 bits (71), Expect = 1.3
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Frame = +2
Query: 200 QKIREELNENVETRDSDLAHIKEWLKKEPHLPDEF-----------DDQRIMTFLRGCKF 346
QK ++ELNE ETR+ + ++E ++ + +E D + F+R KF
Sbjct: 46 QKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKF 105
Query: 347 SLEKTKRKLDMYFTMRTAVPEFF 415
++ + L Y R PE F
Sbjct: 106 NVGRAYELLRGYVNFRLQYPELF 128
>BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding
protein 1 protein.
Length = 317
Score = 32.7 bits (71), Expect = 1.3
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Frame = +2
Query: 200 QKIREELNENVETRDSDLAHIKEWLKKEPHLPDEF-----------DDQRIMTFLRGCKF 346
QK ++ELNE ETR+ + ++E ++ + +E D + F+R KF
Sbjct: 46 QKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKF 105
Query: 347 SLEKTKRKLDMYFTMRTAVPEFF 415
++ + L Y R PE F
Sbjct: 106 NVGRAYELLRGYVNFRLQYPELF 128
>U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/104 (24%), Positives = 41/104 (39%)
Frame = +2
Query: 284 PHLPDEFDDQRIMTFLRGCKFSLEKTKRKLDMYFTMRTAVPEFFTNRDVKRPELQEILSL 463
P P D ++ FLR F L+ R L Y+ R PE + D+ + +L
Sbjct: 41 PLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEI--SADLHPRSIIGLLKA 98
Query: 464 VQTPALPGITPEGRRVVIMRGLDKDAATPNVADAFKLAFMMGDV 595
L P G +V+I R D D F+++ + ++
Sbjct: 99 GYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSEL 142
>D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/104 (24%), Positives = 41/104 (39%)
Frame = +2
Query: 284 PHLPDEFDDQRIMTFLRGCKFSLEKTKRKLDMYFTMRTAVPEFFTNRDVKRPELQEILSL 463
P P D ++ FLR F L+ R L Y+ R PE + D+ + +L
Sbjct: 41 PLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEI--SADLHPRSIIGLLKA 98
Query: 464 VQTPALPGITPEGRRVVIMRGLDKDAATPNVADAFKLAFMMGDV 595
L P G +V+I R D D F+++ + ++
Sbjct: 99 GYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSEL 142
>BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha)
transfer protein protein.
Length = 278
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/104 (24%), Positives = 41/104 (39%)
Frame = +2
Query: 284 PHLPDEFDDQRIMTFLRGCKFSLEKTKRKLDMYFTMRTAVPEFFTNRDVKRPELQEILSL 463
P P D ++ FLR F L+ R L Y+ R PE + D+ + +L
Sbjct: 41 PLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEI--SADLHPRSIIGLLKA 98
Query: 464 VQTPALPGITPEGRRVVIMRGLDKDAATPNVADAFKLAFMMGDV 595
L P G +V+I R D D F+++ + ++
Sbjct: 99 GYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSEL 142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,222,521
Number of Sequences: 237096
Number of extensions: 2303441
Number of successful extensions: 5753
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5743
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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