Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0541
(392 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 172 2e-42
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 155 4e-37
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 153 1e-36
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 145 2e-34
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 141 4e-33
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 126 1e-28
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 122 2e-27
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 119 2e-26
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 116 2e-25
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 115 3e-25
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 110 8e-24
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 105 4e-22
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 104 5e-22
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 100 9e-21
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 98 5e-20
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 96 2e-19
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 79 3e-14
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 64 7e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 59 3e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 52 4e-06
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 52 4e-06
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 51 7e-06
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 45 5e-04
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 34 0.85
UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genom... 33 2.6
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 32 4.5
UniRef50_A5Y2D7 Cluster: Concanavalin A-like lectin/glucanase; n... 31 6.0
UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.0
UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finge... 31 7.9
UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY0403... 31 7.9
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 172 bits (418), Expect = 2e-42
Identities = 80/106 (75%), Positives = 89/106 (83%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 189
KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASVY +
Sbjct: 4 KRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYEGYP 63
Query: 190 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 327
LPKLYAKLHYCVSCAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 64 LPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 155 bits (375), Expect = 4e-37
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 189
KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIV AAAVRDI++ SV+ +
Sbjct: 4 KRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYV 63
Query: 190 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 294
LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 153 bits (371), Expect = 1e-36
Identities = 68/110 (61%), Positives = 82/110 (74%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 189
KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIV AA+RD+ +ASVY +
Sbjct: 4 KRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYT 63
Query: 190 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 339
LPKLYAK YCVSCAIHS VVR RS+ +RR+RTPP R P+ Q
Sbjct: 64 LPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 145 bits (352), Expect = 2e-34
Identities = 63/96 (65%), Positives = 79/96 (82%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 189
KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIV AAAVRD+++ASVYP +
Sbjct: 4 KRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYA 63
Query: 190 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 297
LPK Y KLHYCVSCAIH+++VR RS++DR+ R PP+
Sbjct: 64 LPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 141 bits (342), Expect = 4e-33
Identities = 66/110 (60%), Positives = 82/110 (74%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 189
KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIV AAAVRDI+D S ++
Sbjct: 4 KRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALTKYK 63
Query: 190 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 339
LPK Y KL YCVSC IH +VVR RS+ DRR R PPK + ++ QAV+
Sbjct: 64 LPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 126 bits (305), Expect = 1e-28
Identities = 57/65 (87%), Positives = 61/65 (93%)
Frame = +1
Query: 148 VRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 327
+RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FPRDM+RP
Sbjct: 17 LRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFPRDMARP 76
Query: 328 QAVQR 342
Q VQR
Sbjct: 77 QNVQR 81
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 122 bits (295), Expect = 2e-27
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Frame = +1
Query: 16 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLP 195
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+V AAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 196 K--LYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 330
K LY KL+YCV CAIH KVVRN K + +T P P + PQ
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQ 107
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 119 bits (287), Expect = 2e-26
Identities = 52/95 (54%), Positives = 68/95 (71%)
Frame = +1
Query: 7 VKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMF 186
VKRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V A++ +D++DA +Y +
Sbjct: 3 VKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQGY 62
Query: 187 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 291
+LPK Y K +YCVSCA+H VVR R+ RR R P
Sbjct: 63 ELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 116 bits (278), Expect = 2e-25
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Frame = +1
Query: 7 VKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMF 186
VKRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V ++ RDI +
Sbjct: 81 VKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFENE 140
Query: 187 Q--LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSN 303
+ +PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 141 KQGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 115 bits (277), Expect = 3e-25
Identities = 59/110 (53%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPM-- 183
KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V A++ RDI + Y
Sbjct: 4 KRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYAQSD 63
Query: 184 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQA 333
F +PK+Y KL YCVSCAIH+++VR RS +DRR R K R RP+A
Sbjct: 64 FTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 110 bits (265), Expect = 8e-24
Identities = 54/87 (62%), Positives = 65/87 (74%)
Frame = +1
Query: 31 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAK 210
AK G GHV+ V C + A C+PKDKAIK F+I+NI+ AAAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 211 LHYCVSCAIHSKVVRNRSKKDRRIRTP 291
LHYCVSCAIHS+VVRN K RR P
Sbjct: 71 LHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 105 bits (251), Expect = 4e-22
Identities = 52/103 (50%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Frame = +1
Query: 10 KRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDAS-VY- 177
KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R ++ AA+ RD+ +AS VY
Sbjct: 4 KRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASPVYG 63
Query: 178 PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNF 306
F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 64 ANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 104 bits (250), Expect = 5e-22
Identities = 47/56 (83%), Positives = 52/56 (92%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVY 177
KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 4 KRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 100 bits (240), Expect = 9e-21
Identities = 44/82 (53%), Positives = 62/82 (75%)
Frame = +1
Query: 52 VKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 231
VK V C + VPKDKA+++F++RNIV +AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 232 AIHSKVVRNRSKKDRRIRTPPK 297
AIHSKVVR RS++ RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 98.3 bits (234), Expect = 5e-20
Identities = 43/92 (46%), Positives = 64/92 (69%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 189
KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV +++RD+ D+ +Y +
Sbjct: 4 KRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYEYYT 63
Query: 190 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 285
+PKLY K + + AIH+++VR RSK DR+ R
Sbjct: 64 MPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 96.3 bits (229), Expect = 2e-19
Identities = 40/91 (43%), Positives = 62/91 (68%)
Frame = +1
Query: 13 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQL 192
RRN GR K RG +++C C PKDKAIK+F I++++ A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 193 PKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 285
P++ K +CVSCA H+K+VR RS + R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 79.0 bits (186), Expect = 3e-14
Identities = 36/91 (39%), Positives = 55/91 (60%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 189
KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P ++
Sbjct: 4 KRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLPGYK 63
Query: 190 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRI 282
PKLY+ + Y +S A K ++ KK RRI
Sbjct: 64 APKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 64.5 bits (150), Expect = 7e-10
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = +1
Query: 43 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKL 213
R +V+ + NC + +PKDKA KKFV RNIV AAAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 59.3 bits (137), Expect = 3e-08
Identities = 31/107 (28%), Positives = 54/107 (50%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 189
KR+N GR K +G V C NC + +P+ KA++ V + + +++
Sbjct: 8 KRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI---- 63
Query: 190 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 330
+P+ Y YCV+CAI+ +++ RS+ +R+ + P R RPQ
Sbjct: 64 VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 52.0 bits (119), Expect = 4e-06
Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +1
Query: 13 RRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPM 183
RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIV AAA+R
Sbjct: 5 RRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR---------- 53
Query: 184 FQLPKLYAKLHYCVSCAIHSKV 249
Y KLH CVSCAIH KV
Sbjct: 54 -----FYVKLHCCVSCAIHIKV 70
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 52.0 bits (119), Expect = 4e-06
Identities = 24/94 (25%), Positives = 48/94 (51%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 189
KR+N GR K +G + C NC + +P+ KA++ V + V R++
Sbjct: 4 KRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI---- 59
Query: 190 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 291
+ + YC++CA+ +++ RS+++R+ + P
Sbjct: 60 ISRYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 51.2 bits (117), Expect = 7e-06
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDI-NDASVYPMF 186
KR + GR K +G V+C NC R VP DKAI + + V ++ ++ +
Sbjct: 4 KRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAIIMRY 63
Query: 187 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRR 279
+ K YCVSCA+H +V+ R ++ R+
Sbjct: 64 PVTKC-----YCVSCAVHYGIVKIRPEEQRK 89
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 45.2 bits (102), Expect = 5e-04
Identities = 31/89 (34%), Positives = 42/89 (47%)
Frame = -3
Query: 300 TLGRSTDSSVFLRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRXYDVPN 121
+L RS+DSSV S +N +VD A + V RG ISD DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 120 HELFDGLVLWHAPRAVCASHGFNVTTSML 34
DGLVLW+ V S +VT+++L
Sbjct: 90 SHSLDGLVLWNRSGTVDTSDRLDVTSTLL 118
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 34.3 bits (75), Expect = 0.85
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 55 KAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 234
K VRC C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNVAG-----ELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 235 IHSKVVRNRSK 267
H + +R +
Sbjct: 63 RHRGIKDHRKE 73
>UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 858
Score = 32.7 bits (71), Expect = 2.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 177 VYRGIVNISDRRRXYDVPNHELFDGLVLWHAPRAVCASHGF 55
VY G +SD +R ++V E F L+LW++ +HG+
Sbjct: 75 VYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGY 115
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 31.9 bits (69), Expect = 4.5
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +1
Query: 64 RCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAK 210
R N ++C+PKDK++ ++V N + +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPI-KFTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_A5Y2D7 Cluster: Concanavalin A-like lectin/glucanase; n=1;
Pyrococcus abyssi virus 1|Rep: Concanavalin A-like
lectin/glucanase - Pyrococcus abyssi virus 1
Length = 678
Score = 31.5 bits (68), Expect = 6.0
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -3
Query: 177 VYRGIVNISDRRRXYDVPNHELFDGLVLWHAPRAVCASHG 58
+Y ++ S+ R+ Y+ P++ DGL+LW+ P + S G
Sbjct: 390 IYNRALSDSEIRQIYENPSNPPLDGLILWYDPYSYDPSTG 429
>UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 3588
Score = 31.5 bits (68), Expect = 6.0
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +1
Query: 37 HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLH 216
+G + VR TN RC+ K +K NI+ + + S M+ LP+
Sbjct: 2245 NGSEGLSEVRVTN--RCIMCGKLVK-----NIISTENKEEQDGTSEVVMYSLPQTTGVWA 2297
Query: 217 YCVSCAIHSKVVRNRSKK 270
CV+C +SK + N K+
Sbjct: 2298 LCVACEAYSKYLENLCKE 2315
>UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finger
protein 646; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Zinc finger protein 646 - Monodelphis
domestica
Length = 1709
Score = 31.1 bits (67), Expect = 7.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKK 114
+RR GR + G G AVRC C +P+ ++++
Sbjct: 1386 RRRRAGRVRRGGGPRVAVRCALCGHSLPRRGSLER 1420
>UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY04032;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04032 - Plasmodium yoelii yoelii
Length = 1508
Score = 31.1 bits (67), Expect = 7.9
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 88 VPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI-HSKVVRNRS 264
V K + +K I+ I+ A+ +IND + MF + + CV+ I H+ + RN +
Sbjct: 589 VEKKRCEQKLDIKKIINNDALTNINDLEIRKMFDSSEYNTEKINCVTGDICHTTMFRNNN 648
Query: 265 -----KKDRRIRT 288
KKD++I++
Sbjct: 649 SNHEEKKDKKIKS 661
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,098,132
Number of Sequences: 1657284
Number of extensions: 5721850
Number of successful extensions: 14525
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14513
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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