BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0538 (750 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p pro... 69 5e-12 AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA... 69 5e-12 U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome ass... 69 7e-12 AY113255-1|AAM29260.1| 283|Drosophila melanogaster AT14585p pro... 58 1e-08 AE014297-4190|AAF56755.2| 283|Drosophila melanogaster CG5017-PA... 58 1e-08 AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p pro... 38 0.019 AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.1... 38 0.019 AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA ... 38 0.019 AY058597-1|AAL13826.1| 607|Drosophila melanogaster LD29172p pro... 30 2.9 AE014296-2838|AAN11720.1| 607|Drosophila melanogaster CG11905-P... 30 2.9 AE014296-2837|AAN11719.1| 607|Drosophila melanogaster CG11905-P... 30 2.9 AE014296-2836|AAF49392.3| 607|Drosophila melanogaster CG11905-P... 30 2.9 >BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p protein. Length = 370 Score = 69.3 bits (162), Expect = 5e-12 Identities = 30/58 (51%), Positives = 40/58 (68%) Frame = +1 Query: 1 SVRTVTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174 +VRT+ K V DSFFNFF+PP +P D V D Q +L DFEIGH++R R++ +AV Sbjct: 260 AVRTIVKQVPTDSFFNFFSPPEVPSD-QEEVDDDSQQILATDFEIGHFLRARIIPKAV 316 >AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA protein. Length = 370 Score = 69.3 bits (162), Expect = 5e-12 Identities = 30/58 (51%), Positives = 40/58 (68%) Frame = +1 Query: 1 SVRTVTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174 +VRT+ K V DSFFNFF+PP +P D V D Q +L DFEIGH++R R++ +AV Sbjct: 260 AVRTIVKQVPTDSFFNFFSPPEVPSD-QEEVDDDSQQILATDFEIGHFLRARIIPKAV 316 >U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome assembly protein NAP-1 protein. Length = 370 Score = 68.9 bits (161), Expect = 7e-12 Identities = 29/58 (50%), Positives = 40/58 (68%) Frame = +1 Query: 1 SVRTVTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174 +VRT+ K V DSFFNFF+PP +P D + D Q +L DFEIGH++R R++ +AV Sbjct: 260 AVRTIVKQVPTDSFFNFFSPPEVPSD-QEEIDDDSQQILATDFEIGHFLRARIIPKAV 316 >AY113255-1|AAM29260.1| 283|Drosophila melanogaster AT14585p protein. Length = 283 Score = 58.4 bits (135), Expect = 1e-08 Identities = 26/49 (53%), Positives = 33/49 (67%) Frame = +1 Query: 28 QADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174 Q SFF FF+PP LPED DV A+L DFE+G Y++ERV+ +AV Sbjct: 198 QEPSFFEFFSPPLLPEDTLDPNYCDVNAMLQNDFEVGFYLKERVIPKAV 246 >AE014297-4190|AAF56755.2| 283|Drosophila melanogaster CG5017-PA protein. Length = 283 Score = 58.4 bits (135), Expect = 1e-08 Identities = 26/49 (53%), Positives = 33/49 (67%) Frame = +1 Query: 28 QADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174 Q SFF FF+PP LPED DV A+L DFE+G Y++ERV+ +AV Sbjct: 198 QEPSFFEFFSPPLLPEDTLDPNYCDVNAMLQNDFEVGFYLKERVIPKAV 246 >AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p protein. Length = 375 Score = 37.5 bits (83), Expect = 0.019 Identities = 20/54 (37%), Positives = 30/54 (55%) Frame = +1 Query: 13 VTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174 VTK + +SFF FF PP + S + +L DFE+G +R ++V +AV Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAV 344 >AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.18 protein. Length = 375 Score = 37.5 bits (83), Expect = 0.019 Identities = 20/54 (37%), Positives = 30/54 (55%) Frame = +1 Query: 13 VTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174 VTK + +SFF FF PP + S + +L DFE+G +R ++V +AV Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAV 344 >AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA protein. Length = 375 Score = 37.5 bits (83), Expect = 0.019 Identities = 20/54 (37%), Positives = 30/54 (55%) Frame = +1 Query: 13 VTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174 VTK + +SFF FF PP + S + +L DFE+G +R ++V +AV Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAV 344 >AY058597-1|AAL13826.1| 607|Drosophila melanogaster LD29172p protein. Length = 607 Score = 30.3 bits (65), Expect = 2.9 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +2 Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331 TK PVP F +R+D+R P+ +KPQ+ Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290 >AE014296-2838|AAN11720.1| 607|Drosophila melanogaster CG11905-PG, isoform G protein. Length = 607 Score = 30.3 bits (65), Expect = 2.9 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +2 Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331 TK PVP F +R+D+R P+ +KPQ+ Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290 >AE014296-2837|AAN11719.1| 607|Drosophila melanogaster CG11905-PD, isoform D protein. Length = 607 Score = 30.3 bits (65), Expect = 2.9 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +2 Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331 TK PVP F +R+D+R P+ +KPQ+ Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290 >AE014296-2836|AAF49392.3| 607|Drosophila melanogaster CG11905-PA, isoform A protein. Length = 607 Score = 30.3 bits (65), Expect = 2.9 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +2 Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331 TK PVP F +R+D+R P+ +KPQ+ Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,424,794 Number of Sequences: 53049 Number of extensions: 471114 Number of successful extensions: 1001 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 990 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 998 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3417159966 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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