Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0538
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p pro... 69 5e-12
AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA... 69 5e-12
U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome ass... 69 7e-12
AY113255-1|AAM29260.1| 283|Drosophila melanogaster AT14585p pro... 58 1e-08
AE014297-4190|AAF56755.2| 283|Drosophila melanogaster CG5017-PA... 58 1e-08
AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p pro... 38 0.019
AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.1... 38 0.019
AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA ... 38 0.019
AY058597-1|AAL13826.1| 607|Drosophila melanogaster LD29172p pro... 30 2.9
AE014296-2838|AAN11720.1| 607|Drosophila melanogaster CG11905-P... 30 2.9
AE014296-2837|AAN11719.1| 607|Drosophila melanogaster CG11905-P... 30 2.9
AE014296-2836|AAF49392.3| 607|Drosophila melanogaster CG11905-P... 30 2.9
>BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p
protein.
Length = 370
Score = 69.3 bits (162), Expect = 5e-12
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +1
Query: 1 SVRTVTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
+VRT+ K V DSFFNFF+PP +P D V D Q +L DFEIGH++R R++ +AV
Sbjct: 260 AVRTIVKQVPTDSFFNFFSPPEVPSD-QEEVDDDSQQILATDFEIGHFLRARIIPKAV 316
>AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA
protein.
Length = 370
Score = 69.3 bits (162), Expect = 5e-12
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +1
Query: 1 SVRTVTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
+VRT+ K V DSFFNFF+PP +P D V D Q +L DFEIGH++R R++ +AV
Sbjct: 260 AVRTIVKQVPTDSFFNFFSPPEVPSD-QEEVDDDSQQILATDFEIGHFLRARIIPKAV 316
>U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome
assembly protein NAP-1 protein.
Length = 370
Score = 68.9 bits (161), Expect = 7e-12
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +1
Query: 1 SVRTVTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
+VRT+ K V DSFFNFF+PP +P D + D Q +L DFEIGH++R R++ +AV
Sbjct: 260 AVRTIVKQVPTDSFFNFFSPPEVPSD-QEEIDDDSQQILATDFEIGHFLRARIIPKAV 316
>AY113255-1|AAM29260.1| 283|Drosophila melanogaster AT14585p
protein.
Length = 283
Score = 58.4 bits (135), Expect = 1e-08
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +1
Query: 28 QADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
Q SFF FF+PP LPED DV A+L DFE+G Y++ERV+ +AV
Sbjct: 198 QEPSFFEFFSPPLLPEDTLDPNYCDVNAMLQNDFEVGFYLKERVIPKAV 246
>AE014297-4190|AAF56755.2| 283|Drosophila melanogaster CG5017-PA
protein.
Length = 283
Score = 58.4 bits (135), Expect = 1e-08
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +1
Query: 28 QADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
Q SFF FF+PP LPED DV A+L DFE+G Y++ERV+ +AV
Sbjct: 198 QEPSFFEFFSPPLLPEDTLDPNYCDVNAMLQNDFEVGFYLKERVIPKAV 246
>AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p
protein.
Length = 375
Score = 37.5 bits (83), Expect = 0.019
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 13 VTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
VTK + +SFF FF PP + S + +L DFE+G +R ++V +AV
Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAV 344
>AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.18
protein.
Length = 375
Score = 37.5 bits (83), Expect = 0.019
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 13 VTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
VTK + +SFF FF PP + S + +L DFE+G +R ++V +AV
Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAV 344
>AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA
protein.
Length = 375
Score = 37.5 bits (83), Expect = 0.019
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 13 VTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
VTK + +SFF FF PP + S + +L DFE+G +R ++V +AV
Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAV 344
>AY058597-1|AAL13826.1| 607|Drosophila melanogaster LD29172p
protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331
TK PVP F +R+D+R P+ +KPQ+
Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290
>AE014296-2838|AAN11720.1| 607|Drosophila melanogaster CG11905-PG,
isoform G protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331
TK PVP F +R+D+R P+ +KPQ+
Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290
>AE014296-2837|AAN11719.1| 607|Drosophila melanogaster CG11905-PD,
isoform D protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331
TK PVP F +R+D+R P+ +KPQ+
Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290
>AE014296-2836|AAF49392.3| 607|Drosophila melanogaster CG11905-PA,
isoform A protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331
TK PVP F +R+D+R P+ +KPQ+
Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,424,794
Number of Sequences: 53049
Number of extensions: 471114
Number of successful extensions: 1001
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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