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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0538
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p pro...    69   5e-12
AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA...    69   5e-12
U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome ass...    69   7e-12
AY113255-1|AAM29260.1|  283|Drosophila melanogaster AT14585p pro...    58   1e-08
AE014297-4190|AAF56755.2|  283|Drosophila melanogaster CG5017-PA...    58   1e-08
AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p pro...    38   0.019
AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.1...    38   0.019
AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA ...    38   0.019
AY058597-1|AAL13826.1|  607|Drosophila melanogaster LD29172p pro...    30   2.9  
AE014296-2838|AAN11720.1|  607|Drosophila melanogaster CG11905-P...    30   2.9  
AE014296-2837|AAN11719.1|  607|Drosophila melanogaster CG11905-P...    30   2.9  
AE014296-2836|AAF49392.3|  607|Drosophila melanogaster CG11905-P...    30   2.9  

>BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p
           protein.
          Length = 370

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = +1

Query: 1   SVRTVTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
           +VRT+ K V  DSFFNFF+PP +P D    V  D Q +L  DFEIGH++R R++ +AV
Sbjct: 260 AVRTIVKQVPTDSFFNFFSPPEVPSD-QEEVDDDSQQILATDFEIGHFLRARIIPKAV 316


>AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA
           protein.
          Length = 370

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = +1

Query: 1   SVRTVTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
           +VRT+ K V  DSFFNFF+PP +P D    V  D Q +L  DFEIGH++R R++ +AV
Sbjct: 260 AVRTIVKQVPTDSFFNFFSPPEVPSD-QEEVDDDSQQILATDFEIGHFLRARIIPKAV 316


>U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome
           assembly protein NAP-1 protein.
          Length = 370

 Score = 68.9 bits (161), Expect = 7e-12
 Identities = 29/58 (50%), Positives = 40/58 (68%)
 Frame = +1

Query: 1   SVRTVTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
           +VRT+ K V  DSFFNFF+PP +P D    +  D Q +L  DFEIGH++R R++ +AV
Sbjct: 260 AVRTIVKQVPTDSFFNFFSPPEVPSD-QEEIDDDSQQILATDFEIGHFLRARIIPKAV 316


>AY113255-1|AAM29260.1|  283|Drosophila melanogaster AT14585p
           protein.
          Length = 283

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = +1

Query: 28  QADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
           Q  SFF FF+PP LPED       DV A+L  DFE+G Y++ERV+ +AV
Sbjct: 198 QEPSFFEFFSPPLLPEDTLDPNYCDVNAMLQNDFEVGFYLKERVIPKAV 246


>AE014297-4190|AAF56755.2|  283|Drosophila melanogaster CG5017-PA
           protein.
          Length = 283

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = +1

Query: 28  QADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
           Q  SFF FF+PP LPED       DV A+L  DFE+G Y++ERV+ +AV
Sbjct: 198 QEPSFFEFFSPPLLPEDTLDPNYCDVNAMLQNDFEVGFYLKERVIPKAV 246


>AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p
           protein.
          Length = 375

 Score = 37.5 bits (83), Expect = 0.019
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +1

Query: 13  VTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
           VTK +  +SFF FF PP   +   S      + +L  DFE+G  +R ++V +AV
Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAV 344


>AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.18
           protein.
          Length = 375

 Score = 37.5 bits (83), Expect = 0.019
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +1

Query: 13  VTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
           VTK +  +SFF FF PP   +   S      + +L  DFE+G  +R ++V +AV
Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAV 344


>AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA
           protein.
          Length = 375

 Score = 37.5 bits (83), Expect = 0.019
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +1

Query: 13  VTKSVQADSFFNFFNPPTLPEDPNSTVASDVQALLTADFEIGHYIRERVVSRAV 174
           VTK +  +SFF FF PP   +   S      + +L  DFE+G  +R ++V +AV
Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAV 344


>AY058597-1|AAL13826.1|  607|Drosophila melanogaster LD29172p
           protein.
          Length = 607

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331
           TK PVP  F  +R+D+R  P+  +KPQ+
Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290


>AE014296-2838|AAN11720.1|  607|Drosophila melanogaster CG11905-PG,
           isoform G protein.
          Length = 607

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331
           TK PVP  F  +R+D+R  P+  +KPQ+
Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290


>AE014296-2837|AAN11719.1|  607|Drosophila melanogaster CG11905-PD,
           isoform D protein.
          Length = 607

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331
           TK PVP  F  +R+D+R  P+  +KPQ+
Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290


>AE014296-2836|AAF49392.3|  607|Drosophila melanogaster CG11905-PA,
           isoform A protein.
          Length = 607

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 248 TKTPVPRKFPTWRIDTRPSPLAFYKPQR 331
           TK PVP  F  +R+D+R  P+  +KPQ+
Sbjct: 265 TKAPVPVNFKEYRLDSREKPV--HKPQK 290


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,424,794
Number of Sequences: 53049
Number of extensions: 471114
Number of successful extensions: 1001
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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