Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0537
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 40 0.006
AL117478-1|CAB55951.1| 698|Homo sapiens hypothetical protein pr... 35 0.24
AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein. 35 0.24
AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein. 35 0.32
AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-ri... 34 0.42
AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-ri... 34 0.42
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 34 0.56
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 33 0.74
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 33 0.74
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 33 0.74
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 33 0.74
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 33 0.74
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 33 1.3
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 33 1.3
AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isofor... 32 1.7
AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein. 32 1.7
AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein. 32 1.7
AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein. 32 1.7
AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein. 32 1.7
AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein. 32 1.7
AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein. 32 1.7
AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein. 32 1.7
AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein. 32 1.7
AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein. 32 1.7
AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein. 32 1.7
AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein. 32 1.7
AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein. 32 1.7
AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein. 32 1.7
AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein. 32 1.7
AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein. 32 1.7
AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein. 32 1.7
AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein. 32 1.7
AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein. 32 1.7
AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein. 32 1.7
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 32 2.3
BC034718-1|AAH34718.1| 633|Homo sapiens EPB41L2 protein protein. 32 2.3
BC033256-1|AAH33256.1| 319|Homo sapiens FAM83H protein protein. 31 4.0
AK127960-1|BAC87207.1| 886|Homo sapiens protein ( Homo sapiens ... 31 4.0
U82468-1|AAB53700.1| 542|Homo sapiens tubby related protein 1 T... 31 5.2
BC122524-1|AAI22525.1| 134|Homo sapiens putative protein produc... 31 5.2
AF034923-1|AAB97966.1| 542|Homo sapiens tubby like protein 1 pr... 31 5.2
BC103911-1|AAI03912.1| 753|Homo sapiens transcription elongatio... 30 6.9
AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein. 30 6.9
AK128694-1|BAC87575.1| 291|Homo sapiens protein ( Homo sapiens ... 30 6.9
AK128076-1|BAC87261.1| 140|Homo sapiens protein ( Homo sapiens ... 30 6.9
AK123191-1|BAC85553.1| 221|Homo sapiens protein ( Homo sapiens ... 30 6.9
AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein. 30 6.9
AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isofo... 30 6.9
AB030834-1|BAA90665.1| 753|Homo sapiens transcription factor El... 30 6.9
BX284686-2|CAM26210.1| 306|Homo sapiens proline-rich transmembr... 30 9.1
BC063046-1|AAH63046.1| 306|Homo sapiens proline-rich transmembr... 30 9.1
BC036022-1|AAH36022.1| 753|Homo sapiens transcription elongatio... 30 9.1
BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology... 30 9.1
AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 30 9.1
AL845464-1|CAI41794.2| 306|Homo sapiens proline-rich transmembr... 30 9.1
AL662884-7|CAI18339.2| 306|Homo sapiens proline-rich transmembr... 30 9.1
AL662828-7|CAI17422.2| 306|Homo sapiens proline-rich transmembr... 30 9.1
AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens ... 30 9.1
AK054885-1|BAB70821.1| 306|Homo sapiens protein ( Homo sapiens ... 30 9.1
AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein. 30 9.1
AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein. 30 9.1
AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein. 30 9.1
AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein. 30 9.1
AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein. 30 9.1
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 40.3 bits (90), Expect = 0.006
Identities = 50/225 (22%), Positives = 72/225 (32%), Gaps = 2/225 (0%)
Frame = +3
Query: 12 SLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGAL 191
S P PG +P+P S S R + P S TS+ + + +
Sbjct: 2 SAPTTSTTSGPGTTPSPVPTTSTTSAPTTRTTSAPKSSTTSAATTSTTSGPETTPRPVPT 61
Query: 192 PSTCPSRQTRPRQGICARTLPXXXXXXXXXXXXXXXXXXXXXXXTLPREGSRTCACSLPR 371
ST S T T + P + + S
Sbjct: 62 TSTTSSPTTSTTSAPTTSTTSASTTSTTSGAGTTPSPVPTTSTTSAPTTRTTSAPISSTT 121
Query: 372 IQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*STR*PPSACPC*ETS 551
TST+ GP P + T++ P PG SA+P S ++ P T+
Sbjct: 122 SATTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSAVPTTSI----TSVPTTSTN 177
Query: 552 SVPREGTSARPLPRREAHP--IPSPHREARACAHRETRTVPG*GT 680
S P T++ R + P PSP A + T T G GT
Sbjct: 178 SAPISSTTSATTTSRISGPETTPSPVPTASTTSASTTSTTSGPGT 222
>AL117478-1|CAB55951.1| 698|Homo sapiens hypothetical protein
protein.
Length = 698
Score = 35.1 bits (77), Expect = 0.24
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 579 RPLPRREAHPIPSPHREARACAHRETRTVPG*GTG 683
RP R+AHP P+P R + + +H R +P GTG
Sbjct: 363 RPCAHRQAHPAPTPGRRSHSHSHVLPRPLPRTGTG 397
>AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein.
Length = 440
Score = 35.1 bits (77), Expect = 0.24
Identities = 26/72 (36%), Positives = 29/72 (40%)
Frame = +3
Query: 39 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 218
LP P PR TLP T P P GT TLP+ + P T PS +T
Sbjct: 220 LPATGTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRT 279
Query: 219 RPRQGICARTLP 254
P RTLP
Sbjct: 280 LP----TPRTLP 287
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/69 (33%), Positives = 27/69 (39%)
Frame = +3
Query: 39 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 218
LP + P P S TLP T P P GT TLP+ P T P+ +T
Sbjct: 226 LPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLPTPRT 285
Query: 219 RPRQGICAR 245
P G R
Sbjct: 286 LPTPGTLPR 294
Score = 31.1 bits (67), Expect = 4.0
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +3
Query: 12 SLPRRKAHPLPGRKENPLPRESARSP--TLPRCQTCPLPS*RDCQGTSSRTATLPSRKEG 185
+LP + P PG LP P T+P T P P T TLPS +
Sbjct: 225 TLPPPRTLPSPGT----LPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTL 280
Query: 186 ALPSTCPSRQTRPRQG 233
P T P+ T PR G
Sbjct: 281 PTPRTLPTPGTLPRPG 296
>AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein.
Length = 372
Score = 34.7 bits (76), Expect = 0.32
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 384 TSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*STR*PPSACPC*ETSSVPR 563
TST+ P T + + T++ P P+P T++ P ST P P S VP
Sbjct: 98 TSTTSAPTTSTTSASTASTTSGPGTSLSPVPTTSTTSAPTTSTTSGPGTTP----SPVPT 153
Query: 564 EGTSARPLPRREAHP--IPSP 620
T++ P + P PSP
Sbjct: 154 TSTTSAPTTSTTSGPGTTPSP 174
>AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.42
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +3
Query: 15 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 194
LPR+ + P + P R + R LPR C +P R C P + LP
Sbjct: 423 LPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPIPLP 482
Query: 195 STCPS 209
+ CPS
Sbjct: 483 APCPS 487
Score = 31.5 bits (68), Expect = 3.0
Identities = 31/108 (28%), Positives = 39/108 (36%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*STR*PPSACPC*E 545
PR++ S P + LPR S+ P P + LPR P PC +
Sbjct: 406 PRLRPEPCISLEPRPRPLPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQ 465
Query: 546 TSSVPREGTSARPLPRREAHPIPSPHREARACAHRETRTVPG*GTGTN 689
P P PR E P+P+P C RET P G N
Sbjct: 466 PCEHPE------PCPRPEPIPLPAPCPSPEPC--RETWRSPSPCWGPN 505
>AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.42
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +3
Query: 15 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 194
LPR+ + P + P R + R LPR C +P R C P + LP
Sbjct: 423 LPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPIPLP 482
Query: 195 STCPS 209
+ CPS
Sbjct: 483 APCPS 487
Score = 31.5 bits (68), Expect = 3.0
Identities = 31/108 (28%), Positives = 39/108 (36%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*STR*PPSACPC*E 545
PR++ S P + LPR S+ P P + LPR P PC +
Sbjct: 406 PRLRPEPCISLEPRPRPLPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQ 465
Query: 546 TSSVPREGTSARPLPRREAHPIPSPHREARACAHRETRTVPG*GTGTN 689
P P PR E P+P+P C RET P G N
Sbjct: 466 PCEHPE------PCPRPEPIPLPAPCPSPEPC--RETWRSPSPCWGPN 505
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 33.9 bits (74), Expect = 0.56
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 384 TSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*STR*PPSACPC*ETSSVPR 563
TST+ P +T S ++ P P+P T++ P ST P P S VP
Sbjct: 1247 TSTTSAPTTRTTSAPTSSMTSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTP----SPVPT 1302
Query: 564 EGTSARPLPRREAHP--IPSP 620
T++ P+ + P PSP
Sbjct: 1303 TSTTSAPITSTTSGPGSTPSP 1323
Score = 33.5 bits (73), Expect = 0.74
Identities = 50/228 (21%), Positives = 74/228 (32%), Gaps = 2/228 (0%)
Frame = +3
Query: 3 SSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 182
S+ S P P P S S P T P+ R G ++ T P+
Sbjct: 1080 STTSAPTTSTIPASTPSTTSAPTTSTTSA--PTTSTTSAPTHRTTSGPTTSTTLAPTTST 1137
Query: 183 GALPSTCPSRQTRPRQGICARTLPXXXXXXXXXXXXXXXXXXXXXXXTLPREGSRTCACS 362
+ P+T S + P T+ + P+ + A S
Sbjct: 1138 TSAPTT--STNSAPTTS----TISASTTSTISAPTTSTISSPTSSTTSTPQTSKTSAATS 1191
Query: 363 LPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*STR*PPSACPC* 542
GT+ S P T + + T++ P PG S +P ST +A
Sbjct: 1192 STTSGSGTTPSPVPTTSTTSASTTSTTSAPTTSTTSGPGTTPSPVP--STSITSAATT-- 1247
Query: 543 ETSSVPREGTSARPLPRREAHP--IPSPHREARACAHRETRTVPG*GT 680
T+S P T++ P + P PSP + T T G GT
Sbjct: 1248 STTSAPTTRTTSAPTSSMTSGPGTTPSPVPTTSTTSAPTTSTTSGPGT 1295
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 384 TSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*STR*PPSA----CPC*ETS 551
TST+ P T+P + T++ P P T++ P T P+ P T+
Sbjct: 1079 TSTTSAPTTSTIPASTPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTT 1138
Query: 552 SVPREGTSARP 584
S P T++ P
Sbjct: 1139 SAPTTSTNSAP 1149
Score = 31.1 bits (67), Expect = 4.0
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = +3
Query: 384 TSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*STR*PP----SACPC*ETS 551
TST P T + T + P P P T++ P ST P ++ P T+
Sbjct: 765 TSTISAPTTSTTSTPQTSTISSPTTSTTPTPQTSTTSSPTTSTTSAPTTSTTSAPTTSTT 824
Query: 552 SVPREGTSARPLPRREAHPIPS 617
S P+ S+ P + P S
Sbjct: 825 STPQTSISSAPTSSTTSAPTAS 846
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.5 bits (73), Expect = 0.74
Identities = 35/115 (30%), Positives = 44/115 (38%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
T PR G R + S P +R S S P PR + PRR P R+ S PR
Sbjct: 540 TSPR-GRRRRSPSPPPTRRRRSPSPAPP----PRRRRTPTPPPRRRTPSPPPRRRSPSPR 594
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARACAHRETRTVP 668
+ PP + R S P P+R A P P P R + R+ P
Sbjct: 595 RYS--PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSP 647
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.5 bits (73), Expect = 0.74
Identities = 35/115 (30%), Positives = 44/115 (38%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
T PR G R + S P +R S S P PR + PRR P R+ S PR
Sbjct: 540 TSPR-GRRRRSPSPPPTRRRRSPSPAPP----PRRRRTPTPPPRRRTPSPPPRRRSPSPR 594
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARACAHRETRTVP 668
+ PP + R S P P+R A P P P R + R+ P
Sbjct: 595 RYS--PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSP 647
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.5 bits (73), Expect = 0.74
Identities = 35/115 (30%), Positives = 44/115 (38%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
T PR G R + S P +R S S P PR + PRR P R+ S PR
Sbjct: 540 TSPR-GRRRRSPSPPPTRRRRSPSPAPP----PRRRRTPTPPPRRRTPSPPPRRRSPSPR 594
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARACAHRETRTVP 668
+ PP + R S P P+R A P P P R + R+ P
Sbjct: 595 RYS--PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSP 647
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.5 bits (73), Expect = 0.74
Identities = 35/115 (30%), Positives = 44/115 (38%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
T PR G R + S P +R S S P PR + PRR P R+ S PR
Sbjct: 538 TSPR-GRRRRSPSPPPTRRRRSPSPAPP----PRRRRTPTPPPRRRTPSPPPRRRSPSPR 592
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARACAHRETRTVP 668
+ PP + R S P P+R A P P P R + R+ P
Sbjct: 593 RYS--PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSP 645
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.5 bits (73), Expect = 0.74
Identities = 35/115 (30%), Positives = 44/115 (38%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
T PR G R + S P +R S S P PR + PRR P R+ S PR
Sbjct: 538 TSPR-GRRRRSPSPPPTRRRRSPSPAPP----PRRRRTPTPPPRRRTPSPPPRRRSPSPR 592
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARACAHRETRTVP 668
+ PP + R S P P+R A P P P R + R+ P
Sbjct: 593 RYS--PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSP 645
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.7 bits (71), Expect = 1.3
Identities = 32/112 (28%), Positives = 42/112 (37%)
Frame = +3
Query: 333 REGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*ST 512
+ G R + S P +R S S P PR + PRR P R+ S PR +
Sbjct: 551 KSGRRRRSPSPPPTRRRRSPSPAPP----PRRRRTPTPPPRRRTPSPPPRRRSPSPRRYS 606
Query: 513 R*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARACAHRETRTVP 668
PP + R S P P+R A P P P R + R+ P
Sbjct: 607 --PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSP 656
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.7 bits (71), Expect = 1.3
Identities = 32/112 (28%), Positives = 42/112 (37%)
Frame = +3
Query: 333 REGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*ST 512
+ G R + S P +R S S P PR + PRR P R+ S PR +
Sbjct: 551 KSGRRRRSPSPPPTRRRRSPSPAPP----PRRRRTPTPPPRRRTPSPPPRRRSPSPRRYS 606
Query: 513 R*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARACAHRETRTVP 668
PP + R S P P+R A P P P R + R+ P
Sbjct: 607 --PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSP 656
>AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isoform B
protein.
Length = 837
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 436 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 473
>AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1554 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1591
>AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1554 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1591
>AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein.
Length = 837
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 436 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 473
>AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1556 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1593
>AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1551 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1588
>AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1531 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1568
>AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1554 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1591
>AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1556 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1593
>AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1551 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1588
>AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1531 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1568
>AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1554 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1591
>AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1556 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1593
>AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1551 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1588
>AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1531 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1568
>AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1554 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1591
>AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1556 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1593
>AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1551 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1588
>AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 366 PRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGR 482
P+IQ + + +GP + + R +SQ+ +LPRR R +P R
Sbjct: 1554 PKIQAKSKSLRGP-REKIQRLWSQSVSLPRRLMRKVPNR 1591
>AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein.
Length = 1382
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = +3
Query: 417 LPRAYSQTSALPRREARPIPGRKTSALPR*STR*PPSACPC*ETSSVPREGTSARPLPRR 596
LP S + LP P+P +ALPR P + P + + P A PLPR
Sbjct: 17 LPAVQSASPRLPPGPRGPLPPASPAALPRCPLPSPGAPGPLLPSGAGPSPRPGAPPLPRV 76
Query: 597 EAHPIPSPHREARACA 644
+P P A A
Sbjct: 77 LRPRMPGPRGAAGGLA 92
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 31.9 bits (69), Expect = 2.3
Identities = 28/104 (26%), Positives = 40/104 (38%)
Frame = +3
Query: 384 TSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR*STR*PPSACPC*ETSSVPR 563
TST+ GP P + T++ P P T++ P ST PSA P T+ P
Sbjct: 29 TSTTSGPGTTPSPVPTTSTTSAPTTSTTSAPTTSTTSAPTTST---PSA-PTTSTTLAPT 84
Query: 564 EGTSARPLPRREAHPIPSPHREARACAHRETRTVPG*GTGTNSS 695
T++ P + P S + + T G GT S
Sbjct: 85 TSTTSAPTTSTTSTPTSSTTSTPQTSTTSASTTSITCGPGTTPS 128
>BC034718-1|AAH34718.1| 633|Homo sapiens EPB41L2 protein protein.
Length = 633
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -1
Query: 427 ARGRVCPHGPLLVLVPLCIRGKEQAHVREPSRGKVLSSLLGKERARALRLEHELSFQR 254
A G + +GP LV + + G + VR P++ L + GK L + E S QR
Sbjct: 570 AAGEISAYGPGLVSIAVVQDGDGRREVRSPTKAPHLQLIEGKSSHETLNIVEEKSGQR 627
>BC033256-1|AAH33256.1| 319|Homo sapiens FAM83H protein protein.
Length = 319
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 432 SQTSALPRREARPIPGRKTSALPR*STR*PPSACPC*ETSSVP-REGTSARPLPRREAHP 608
S TSA P R+ P PG T + P TS+ P R G+ P+P R + P
Sbjct: 10 SPTSAYPERKGSPTPGFSTRRGSPTTGFIEQKGSP---TSAYPERRGSPVPPVPERRSSP 66
Query: 609 IP 614
+P
Sbjct: 67 VP 68
>AK127960-1|BAC87207.1| 886|Homo sapiens protein ( Homo sapiens
cDNA FLJ46072 fis, clone TESTI1000459. ).
Length = 886
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 432 SQTSALPRREARPIPGRKTSALPR*STR*PPSACPC*ETSSVP-REGTSARPLPRREAHP 608
S TSA P R+ P PG T + P TS+ P R G+ P+P R + P
Sbjct: 577 SPTSAYPERKGSPTPGFSTRRGSPTTGFIEQKGSP---TSAYPERRGSPVPPVPERRSSP 633
Query: 609 IP 614
+P
Sbjct: 634 VP 635
>U82468-1|AAB53700.1| 542|Homo sapiens tubby related protein 1
TULP1 protein.
Length = 542
Score = 30.7 bits (66), Expect = 5.2
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 450 PRR-EARPIPGRKTSALPR*STR*PPSACPC*ETSSVPRE-GTSARPLPRREAHPIPSPH 623
PRR + RP P ++ L + T P S CP T S PR+ G R PR E P P+
Sbjct: 28 PRRPKQRPAPAQR---LRKKRTEAPESPCP---TGSKPRKPGAGRRGRPREEPSPDPAQA 81
Query: 624 R 626
R
Sbjct: 82 R 82
>BC122524-1|AAI22525.1| 134|Homo sapiens putative protein product
of Nbla00301 protein.
Length = 134
Score = 30.7 bits (66), Expect = 5.2
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Frame = +3
Query: 21 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD-------CQGTS-SRTATLPSR 176
R ++ P PG L S R P P QT PS CQ S +R A LP+R
Sbjct: 6 RNQSSPPPG----DLHFRSLRLPVTPERQTADWPSCLKTQPDSDACQPASPTRAAALPTR 61
Query: 177 KEGALPSTCP-SRQTRPRQGI 236
G P CP + ++R GI
Sbjct: 62 MGGTTPPRCPRAERSRGSTGI 82
>AF034923-1|AAB97966.1| 542|Homo sapiens tubby like protein 1
protein.
Length = 542
Score = 30.7 bits (66), Expect = 5.2
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 450 PRR-EARPIPGRKTSALPR*STR*PPSACPC*ETSSVPRE-GTSARPLPRREAHPIPSPH 623
PRR + RP P ++ L + T P S CP T S PR+ G R PR E P P+
Sbjct: 28 PRRPKQRPAPAQR---LRKKRTEAPESPCP---TGSKPRKPGAGRRGRPREEPSPDPAQA 81
Query: 624 R 626
R
Sbjct: 82 R 82
>BC103911-1|AAI03912.1| 753|Homo sapiens transcription elongation
factor B polypeptide 3B (elongin A2) protein.
Length = 753
Score = 30.3 bits (65), Expect = 6.9
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +3
Query: 21 RRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQGTSSRTATLPSRK--EGA 188
RR A P ++ P PR +R P R C + P S R + + +RTA LP + E A
Sbjct: 129 RRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YRASPTRTAPLPMPEGPEPA 187
Query: 189 LPSTCPSR-QTRPRQG 233
P P R T QG
Sbjct: 188 APGKQPGRGHTHAAQG 203
>AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein.
Length = 1450
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +3
Query: 36 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 203
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 75 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC 128
>AK128694-1|BAC87575.1| 291|Homo sapiens protein ( Homo sapiens
cDNA FLJ46861 fis, clone UTERU3011092. ).
Length = 291
Score = 30.3 bits (65), Expect = 6.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 411 VHMDLYWYLYLFVYGVRSRHMYGNLHGVRYFLLY 310
VH+ Y Y+ +F+Y +MY ++H Y +Y
Sbjct: 81 VHIHAYAYICIFIYTHMHTYMYIHMHAYAYIYVY 114
>AK128076-1|BAC87261.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ46197 fis, clone TESTI4007565. ).
Length = 140
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +3
Query: 3 SSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLP 122
S C P + P PG + P + PT RC+ P P
Sbjct: 14 SCCPCPCKTGDPGPGNRRRATPMWMPKGPTQERCRPYPPP 53
>AK123191-1|BAC85553.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ41197 fis, clone BRACE2045947. ).
Length = 221
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 69 RESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEG---ALPSTCPSRQ 215
R + + P CQ CP PS T SR ++ P R G ALP R+
Sbjct: 114 RRQRPAASRPHCQQCPWPSEPRRSSTPSRPSSTPPRPAGQGQALPQILIGRE 165
>AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein.
Length = 1450
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +3
Query: 36 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 203
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 75 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC 128
>AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isoform
a variant protein.
Length = 1474
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +3
Query: 36 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 203
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 110 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC 163
>AB030834-1|BAA90665.1| 753|Homo sapiens transcription factor
Elongin A2 protein.
Length = 753
Score = 30.3 bits (65), Expect = 6.9
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +3
Query: 21 RRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQGTSSRTATLPSRK--EGA 188
RR A P ++ P PR +R P R C + P S R + + +RTA LP + E A
Sbjct: 129 RRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YRASPTRTAPLPMPEGPEPA 187
Query: 189 LPSTCPSR-QTRPRQG 233
P P R T QG
Sbjct: 188 APGKQPGRGHTHAAQG 203
>BX284686-2|CAM26210.1| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.9 bits (64), Expect = 9.1
Identities = 38/105 (36%), Positives = 45/105 (42%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
TLPR G+ A S QRG S+S TLPR P A P PG T LP
Sbjct: 55 TLPRLGAGGLASSAATAQRGPSSS-----ATLPRPPHHAPPGPAAGAPP-PGCAT--LP- 105
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARA 638
R PP P + + EG P P A P P+P + A+A
Sbjct: 106 ---RMPPD--PYLQETRF--EGPLPPPPPAAAAPPPPAPAQTAQA 143
>BC063046-1|AAH63046.1| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.9 bits (64), Expect = 9.1
Identities = 38/105 (36%), Positives = 45/105 (42%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
TLPR G+ A S QRG S+S TLPR P A P PG T LP
Sbjct: 55 TLPRLGAGGLASSAATAQRGPSSS-----ATLPRPPHHAPPGPAAGAPP-PGCAT--LP- 105
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARA 638
R PP P + + EG P P A P P+P + A+A
Sbjct: 106 ---RMPPD--PYLQETRF--EGPLPPPPPAAAAPPPPAPAQTAQA 143
>BC036022-1|AAH36022.1| 753|Homo sapiens transcription elongation
factor B polypeptide 3B (elongin A2) protein.
Length = 753
Score = 29.9 bits (64), Expect = 9.1
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +3
Query: 21 RRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQGTSSRTATL--PSRKEGA 188
RR A P ++ P PR +R P R C + P S R + + +RTA L P E A
Sbjct: 129 RRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YRASPTRTAPLRMPEGPEPA 187
Query: 189 LPSTCPSR-QTRPRQG 233
P P R T QG
Sbjct: 188 APGKQPGRGHTHAAQG 203
>BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology
domain containing 1 protein.
Length = 780
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 36 PLPGR--KENPLPRESARSPTLPRCQTCPLP 122
P PGR +E+P P++ P+ P Q PLP
Sbjct: 326 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 356
>AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3
protein.
Length = 1386
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 336 EGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
+G+ TC+ + RG+S+S+G G R+ SQ+ + +R PG+K PR
Sbjct: 1336 QGTSTCSTAGSNSSRGSSSSRGSRGPGRSRSRSQSRSQSQR-----PGQKRREEPR 1386
>AL845464-1|CAI41794.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.9 bits (64), Expect = 9.1
Identities = 38/105 (36%), Positives = 45/105 (42%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
TLPR G+ A S QRG S+S TLPR P A P PG T LP
Sbjct: 55 TLPRLGAGGLASSAATAQRGPSSS-----ATLPRPPHHAPPGPAAGAPP-PGCAT--LP- 105
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARA 638
R PP P + + EG P P A P P+P + A+A
Sbjct: 106 ---RMPPD--PYLQETRF--EGPLPPPPPAAAAPPPPAPAQTAQA 143
>AL662884-7|CAI18339.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.9 bits (64), Expect = 9.1
Identities = 38/105 (36%), Positives = 45/105 (42%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
TLPR G+ A S QRG S+S TLPR P A P PG T LP
Sbjct: 55 TLPRLGAGGLASSAATAQRGPSSS-----ATLPRPPHHAPPGPAAGAPP-PGCAT--LP- 105
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARA 638
R PP P + + EG P P A P P+P + A+A
Sbjct: 106 ---RMPPD--PYLQETRF--EGPLPPPPPAAAAPPPPAPAQTAQA 143
>AL662828-7|CAI17422.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.9 bits (64), Expect = 9.1
Identities = 38/105 (36%), Positives = 45/105 (42%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
TLPR G+ A S QRG S+S TLPR P A P PG T LP
Sbjct: 55 TLPRLGAGGLASSAATAQRGPSSS-----ATLPRPPHHAPPGPAAGAPP-PGCAT--LP- 105
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARA 638
R PP P + + EG P P A P P+P + A+A
Sbjct: 106 ---RMPPD--PYLQETRF--EGPLPPPPPAAAAPPPPAPAQTAQA 143
>AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens cDNA
FLJ43332 fis, clone NT2RI3006340, highly similar to
Myomesin 1. ).
Length = 1685
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 18 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 134
P +KA P K +PL +++ R+P P C L S RD
Sbjct: 910 PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948
>AK054885-1|BAB70821.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ30323 fis, clone BRACE2007109, highly similar to
Extensin-like protein NG5. ).
Length = 306
Score = 29.9 bits (64), Expect = 9.1
Identities = 38/105 (36%), Positives = 45/105 (42%)
Frame = +3
Query: 324 TLPREGSRTCACSLPRIQRGTSTSKGPCGQTLPRAYSQTSALPRREARPIPGRKTSALPR 503
TLPR G+ A S QRG S+S TLPR P A P PG T LP
Sbjct: 55 TLPRLGAGGLASSAATAQRGPSSS-----ATLPRPPHHAPPGPAAGAPP-PGCAT--LP- 105
Query: 504 *STR*PPSACPC*ETSSVPREGTSARPLPRREAHPIPSPHREARA 638
R PP P + + EG P P A P P+P + A+A
Sbjct: 106 ---RMPPD--PYLQETRF--EGPLPPPPPAAAAPPPPAPAQTAQA 143
>AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein.
Length = 1685
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 18 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 134
P +KA P K +PL +++ R+P P C L S RD
Sbjct: 910 PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948
>AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +3
Query: 21 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 200
R+ A P ENP P R+P P P P R Q +A +P +P +
Sbjct: 767 RKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS 826
Query: 201 ----CPSRQTRPRQGICARTLP 254
PS T PR + A P
Sbjct: 827 PLPAGPSSCTSPRSPLPAPPRP 848
>AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +3
Query: 21 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 200
R+ A P ENP P R+P P P P R Q +A +P +P +
Sbjct: 767 RKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS 826
Query: 201 ----CPSRQTRPRQGICARTLP 254
PS T PR + A P
Sbjct: 827 PLPAGPSSCTSPRSPLPAPPRP 848
>AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.
Length = 1015
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +3
Query: 21 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 200
R+ A P ENP P R+P P P P R Q +A +P +P +
Sbjct: 879 RKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS 938
Query: 201 ----CPSRQTRPRQGICARTLP 254
PS T PR + A P
Sbjct: 939 PLPAGPSSCTSPRSPLPAPPRP 960
>AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein.
Length = 797
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 36 PLPGR--KENPLPRESARSPTLPRCQTCPLP 122
P PGR +E+P P++ P+ P Q PLP
Sbjct: 344 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 374
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,502,673
Number of Sequences: 237096
Number of extensions: 2423671
Number of successful extensions: 12080
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 10736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12022
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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