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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0529
         (750 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)                    93   3e-19
SB_44005| Best HMM Match : CUE (HMM E-Value=0.38)                      35   0.081
SB_11031| Best HMM Match : VPS9 (HMM E-Value=8.3e-21)                  33   0.33 
SB_32651| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.57 
SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0)              31   0.76 
SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)                   30   2.3  
SB_13773| Best HMM Match : TolA (HMM E-Value=0.042)                    29   3.0  
SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_29288| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.0  
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)          29   5.3  
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.3  
SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)         29   5.3  
SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0)                      29   5.3  
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)            28   7.0  
SB_16625| Best HMM Match : Death (HMM E-Value=1.5)                     28   7.0  
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)                   28   9.3  
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)                   28   9.3  
SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01)                   28   9.3  

>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
          Length = 750

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
 Frame = +3

Query: 120 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNP 299
           +++++ F  S L+ V+T EK  LP+ + +A EK + + F G+E F  ++LKH ET EKNP
Sbjct: 451 RAEVKSFEKSKLQHVETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVETLEKNP 509

Query: 300 LPDKDAIEAE--KEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 443
           LPD   I AE   E     + +  FD +KLKH ET EK  +PTKDVIE E
Sbjct: 510 LPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559



 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
 Frame = +3

Query: 120 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFD--GIEKFDSSQLKHTETQEK 293
           +++++ F+ S L+ V+T EK  LPSA  +  E   + L D   +  FD+S+LKH E QEK
Sbjct: 640 RAEVKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEK 699

Query: 294 NPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 452
           NPLP KD I  E  + +    ++ FD +KLKH +T EKNPLP    I QEK++
Sbjct: 700 NPLPTKDDITTESTETR--AEVKTFDHSKLKHVQTEEKNPLPDAKTIAQEKAS 750



 Score = 84.6 bits (200), Expect = 8e-17
 Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
 Frame = +3

Query: 123 SQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIE--KFDSSQLKHTETQEKN 296
           S +E F  + L+ V+T EK  LP A+++  E   + L D  E  KFD+S+LKH ET+EK 
Sbjct: 489 SGVEVFQKNKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKV 548

Query: 297 PLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 443
            +P KD IEAE   ++    +++FD +KLKH  T EKNPLPT   + +E
Sbjct: 549 VMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVVTQEKNPLPTPQTLHEE 595



 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
 Frame = +3

Query: 120 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNP 299
           +S++  F+TS L+ V+T EK+V+P+ + +  E         ++ FD S+LKH  TQEKNP
Sbjct: 528 RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVVTQEKNP 585

Query: 300 LPDKDAIEAEK-EKNK-FLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 443
           LP    +  E   KNK   + + +FD TKLKH  T EK+ +P+++ I++E
Sbjct: 586 LPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635



 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
 Frame = +3

Query: 165 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNK 344
           DT ++I  P +E    +   K     + KFD++ LKH +T+EKN LP  + I+ E + ++
Sbjct: 389 DTPQQI-WPGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDE 447

Query: 345 FLN--GIENFDPTKLKHTETCEKNPLPTKDVIEQEK 446
           F +   +++F+ +KL+H ET EKN LPTKD I  EK
Sbjct: 448 FPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIADEK 483


>SB_44005| Best HMM Match : CUE (HMM E-Value=0.38)
          Length = 761

 Score = 34.7 bits (76), Expect = 0.081
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
 Frame = +3

Query: 102 RSPQXLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTE 281
           R+P    SQ +G ++ CL   D+       S+        + SL       D  Q K  E
Sbjct: 282 RAPASFDSQSQGSDSDCLNSQDSQTSRTSNSSGKRKKLTPEDSLRRKQAAQDKKQAKVRE 341

Query: 282 TQEKNPLPDKDAIEAEKEKNKFLNGIEN--FDPTKLKHTETCEKNPLPTK 425
            Q K    +K     EKE++K L  +     DP+ L  T+ C ++P+ +K
Sbjct: 342 KQAKQQAQEKK--RQEKERDKLLKKLIKVCLDPS-LIATDPCSEDPILSK 388


>SB_11031| Best HMM Match : VPS9 (HMM E-Value=8.3e-21)
          Length = 900

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +3

Query: 159 DVDTNEKIVLPSAEDVATEKTQKSLFDG-IEKFDSSQLKHTETQEKNPLPDKDAIEAEKE 335
           DV      + P+    A EKT K + DG +EK+     +  +T   + L D D    E+E
Sbjct: 341 DVIGKPPAIPPAQVQAAEEKTPKDIIDGLLEKYKEIGSQMADTSADDGLDDDD---VEEE 397

Query: 336 KNKFLNGIENFDPTKLK 386
            +  L+  + F  TK K
Sbjct: 398 DDDVLDEADRFRDTKRK 414


>SB_32651| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 725

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
 Frame = +3

Query: 192 SAEDVATEKTQ--KSLF--DGIE-KFDSSQLKHTETQEKNPLPDKDAIEAEK-----EKN 341
           S+E+VA  KT+  +SL   D ++ K+ SSQ+   ET++      K   ++E+     EK 
Sbjct: 142 SSEEVAKWKTKLRRSLSKTDALDGKYSSSQIDKLETKQAIKSKKKKRRKSEEKELLGEKV 201

Query: 342 KFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEK 446
              N  +N + TK +H++  EKN         Q+K
Sbjct: 202 DQFNSKKNLNRTKERHSKKMEKNRQDNSKTRSQQK 236


>SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0)
          Length = 1452

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = +3

Query: 252  FDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDV 431
            +D  Q K  E       PD+D +E E+E     NG+E+ D    K      +   PT DV
Sbjct: 839  YDVKQRKRLEQHASYEAPDEDEMEIERE---LQNGLESGDEDDTKADAQRSETNSPTLDV 895

Query: 432  IEQE 443
              Q+
Sbjct: 896  ETQQ 899


>SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)
          Length = 385

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 186 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLP 305
           L S  D   EKT     D +E+F S   +H  T +KNPLP
Sbjct: 194 LSSRSDHVQEKT-----DRLEQFSSQTGRHINTTKKNPLP 228


>SB_13773| Best HMM Match : TolA (HMM E-Value=0.042)
          Length = 1558

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
 Frame = +3

Query: 153  LRDVDTNEKIVLPSAEDV------ATEKTQKSLFDGIEKFDS---SQLKHTETQEKNPLP 305
            ++D+ T E+++   AED       A E  ++++F+  EK +S    + + TE Q+K    
Sbjct: 1137 MKDLTTEEELIASYAEDAERAAEAAKEYRERTMFEIAEKINSIKEQRRQQTEAQKKKMDE 1196

Query: 306  DKDAIEAEKEKNK 344
            +   +EAE E+ +
Sbjct: 1197 EIRRLEAELEEER 1209


>SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1028

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 516 LM*VRSICVVHYKFYFCFCTMATLPG 593
           L+ V  IC VH  FY+C C  +++ G
Sbjct: 55  LVAVLRICSVHLDFYYCTCVWSSMAG 80


>SB_29288| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 270 KHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEK 407
           +HTE  + +P P K  I+ E  +++  + I+       KH+ +CE+
Sbjct: 212 RHTENAKSSPDPIKSEIDGEHSEDEKEHKIKVCPLVDKKHSHSCER 257


>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
          Length = 966

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 290 EEPASGQRRYRSGEGKEQIPERHRELRSH*AEAHGDVRKEP 412
           EEP+  +    +G  KE+  E  RE R H  +    V++EP
Sbjct: 840 EEPSDEEESEEAGREKEEEEEDQREGRDHNDDEESVVKEEP 880


>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2916

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +2

Query: 236 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIPERHRELRS 373
           RR +E+    AE H+    EPA  + R+ SGE  E+    H E++S
Sbjct: 35  RREQEIIELKAELHKRDDLEPAGQRHRHDSGESFEE----HEEIKS 76


>SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)
          Length = 1293

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +2

Query: 236 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIPERHRELRS 373
           RR +E+    AE H+    EPA  + R+ SGE  E+    H E++S
Sbjct: 11  RREQEIIELKAELHKRDDLEPAGQRHRHDSGESFEE----HEEIKS 52


>SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0)
          Length = 644

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 473 VTRKCISLVSPYFNIDVSQIDL 538
           +  KC  L+SPY ++D+   DL
Sbjct: 13  IAAKCTQLISPYLDLDIKYFDL 34


>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
          Length = 446

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = +3

Query: 225 KSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHT--ET 398
           KS+F      + + +  TET+E NP    D  +AE+ +     G  +   T+ K T  ET
Sbjct: 276 KSVFKRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTNMET 335

Query: 399 CEKNPL 416
             K  L
Sbjct: 336 LRKEML 341


>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
          Length = 528

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
 Frame = +3

Query: 207 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDAIEAEKEKNKFLN 353
           A   T   L DG+   D ++ +H +           T E++P  DK         +  L+
Sbjct: 226 ALRDTTHDLLDGLRYSDQAKEEHAKLIPKYHEIMIKTIEQDPTSDKSYKALRDTTHDLLD 285

Query: 354 GIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 452
           G+ +FD  K +H +   K        IEQ+ ++
Sbjct: 286 GLRDFDQAKEEHAKLIPKYHKIMIKTIEQDPTS 318


>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
          Length = 3037

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
 Frame = +3

Query: 105  SPQXLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTET 284
            +P  + S+L     S LR +D+N +  + S  D   E  +K L     +    + K  + 
Sbjct: 1416 APMNITSRLS--KISPLRALDSNAECAVSSDSDSELEDEKKPLASFCSQVKMHKTKEQQC 1473

Query: 285  QEKNPLPDKDAIEAEKEKNKF-LNGIENFDPTKLKHTETCEKN 410
              +  LP++ A +    KN+  +    N     L+ ++T EK+
Sbjct: 1474 NVEKTLPEESAQKRTFVKNRTDMASSLNIRRRHLEDSKTLEKS 1516


>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
          Length = 2049

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 195  AEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEK 332
            ++D   EKT+ S+ +  +  DSS      T+EK    +KD    E+
Sbjct: 1546 SDDGTDEKTEDSMQEDAKDLDSSNTASDTTKEKGKNKEKDKTVLER 1591


>SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01)
          Length = 590

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 257 FEPAEAHRDSGEEPASGQRRYRSGEG 334
           FEP E H DSG+E       Y   EG
Sbjct: 266 FEPMEIHDDSGDEDVDSDDDYDDREG 291


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,027,023
Number of Sequences: 59808
Number of extensions: 469312
Number of successful extensions: 1528
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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