Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0525
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 27 0.21
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.65
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 1.1
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 1.1
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 1.1
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 1.1
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 1.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 1.1
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 1.1
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 8.0
AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical pro... 21 8.0
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 26.6 bits (56), Expect = 0.21
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 589 YPVLSWHFRQIFATEQHGFIKARSTTTN 672
+P SW F + HG IK+ S T+N
Sbjct: 160 HPYESWPFNTMSGATHHGGIKSDSVTSN 187
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.65
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 163 LDDTTATNGSSICNLFAAHFSSVYNTTSIHSFIESVESSNMNFLTCISVTKSQIYRVLKR 342
L +T+ G + + + SS ++TS S E ++N N + S QIY +KR
Sbjct: 147 LSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNPPQIYPWMKR 206
Query: 343 LDVNK 357
+ + +
Sbjct: 207 VHLGQ 211
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 163 LDDTTATNGSSICNLFAAHFSSVYNTTSIHSFIESVESSNMNFLTCISVTKSQIYRVLKR 342
L +T+ G + + + SS ++TS S E ++N N + S QIY +KR
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR 206
Query: 343 LDVNK 357
+ + +
Sbjct: 207 VHLGQ 211
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 163 LDDTTATNGSSICNLFAAHFSSVYNTTSIHSFIESVESSNMNFLTCISVTKSQIYRVLKR 342
L +T+ G + + + SS ++TS S E ++N N + S QIY +KR
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR 206
Query: 343 LDVNK 357
+ + +
Sbjct: 207 VHLGQ 211
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 163 LDDTTATNGSSICNLFAAHFSSVYNTTSIHSFIESVESSNMNFLTCISVTKSQIYRVLKR 342
L +T+ G + + + SS ++TS S E ++N N + S QIY +KR
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR 206
Query: 343 LDVNK 357
+ + +
Sbjct: 207 VHLGQ 211
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 163 LDDTTATNGSSICNLFAAHFSSVYNTTSIHSFIESVESSNMNFLTCISVTKSQIYRVLKR 342
L +T+ G + + + SS ++TS S E ++N N + S QIY +KR
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR 206
Query: 343 LDVNK 357
+ + +
Sbjct: 207 VHLGQ 211
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 163 LDDTTATNGSSICNLFAAHFSSVYNTTSIHSFIESVESSNMNFLTCISVTKSQIYRVLKR 342
L +T+ G + + + SS ++TS S E ++N N + S QIY +KR
Sbjct: 103 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR 162
Query: 343 LDVNK 357
+ + +
Sbjct: 163 VHLGQ 167
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 163 LDDTTATNGSSICNLFAAHFSSVYNTTSIHSFIESVESSNMNFLTCISVTKSQIYRVLKR 342
L +T+ G + + + SS ++TS S E ++N N + S QIY +KR
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR 206
Query: 343 LDVNK 357
+ + +
Sbjct: 207 VHLGQ 211
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 163 LDDTTATNGSSICNLFAAHFSSVYNTTSIHSFIESVESSNMNFLTCISVTKSQIYRVLKR 342
L +T+ G + + + SS ++TS S E ++N N + S QIY +KR
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKR 206
Query: 343 LDVNK 357
+ + +
Sbjct: 207 VHLGQ 211
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 676 MSFVEDLTQGVDHGDSLDTIY 738
MS++ED + + SLD Y
Sbjct: 1 MSYIEDANETDSNNTSLDAFY 21
>AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical
protein protein.
Length = 102
Score = 21.4 bits (43), Expect = 8.0
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 181 TNGSSICNLFAAHFSSVYNTTSIHSFIESVESSNMNFLTCISVTKSQIYRVLKRLDVNKG 360
TNGS+ H++S + S + S S + + IS IY + + + +G
Sbjct: 14 TNGSNFSKFINCHYTSGHLLGSSSLPLRSFYRSRIRYQGRISSLILPIYGLSTKPKIMQG 73
Query: 361 AGSD 372
A S+
Sbjct: 74 AISN 77
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,214
Number of Sequences: 336
Number of extensions: 4064
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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