BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0523 (750 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_0440 + 29401405-29401407,29401721-29401920,29402406-294024... 126 2e-29 08_02_0456 - 17362080-17364156,17364853-17364942,17372615-173733... 29 3.0 03_05_0554 - 25551220-25551310,25551562-25551695,25552115-255522... 29 3.0 10_07_0009 - 11770674-11771000,11771079-11771378,11771487-11771807 29 3.9 01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 29 3.9 01_02_0106 - 11175200-11175385,11175463-11175496,11175987-111762... 29 3.9 11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 28 6.9 02_05_0374 + 28381456-28381785,28382302-28382555,28382665-283827... 28 6.9 09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 28 9.1 03_04_0214 + 18688480-18688832,18688956-18688999,18689039-186891... 28 9.1 03_02_1029 - 13488535-13493037 28 9.1 03_02_1026 + 13313672-13313876,13341211-13342005,13363815-133638... 28 9.1 02_05_0994 - 33369971-33370759,33370856-33370956,33371092-333710... 28 9.1 01_05_0178 - 18971075-18971863,18971960-18972197,18972791-18973041 28 9.1 >01_06_0440 + 29401405-29401407,29401721-29401920,29402406-29402490, 29403038-29403121,29403853-29404147,29404228-29404322, 29406118-29406858 Length = 500 Score = 126 bits (303), Expect = 2e-29 Identities = 56/79 (70%), Positives = 66/79 (83%) Frame = +3 Query: 510 KLRSKRVAPVLIREITRRVNLTGIFQGVYTAGIVLPKPIATCRYWHRSLNPKKLIDIKFS 689 KLRSKR+APVLIRE+TRRV+ I+Q YTAG+VLP PI TCRYWHRSLNPKKLID+ FS Sbjct: 255 KLRSKRLAPVLIREVTRRVHQENIWQAAYTAGVVLPTPITTCRYWHRSLNPKKLIDVGFS 314 Query: 690 HLSRNMTMQRTLKLFKLPD 746 L MTM RT++L+KLP+ Sbjct: 315 RLGPRMTMSRTVRLYKLPE 333 >08_02_0456 - 17362080-17364156,17364853-17364942,17372615-17373318, 17373421-17373451,17374366-17374448,17374517-17374640, 17376427-17376560 Length = 1080 Score = 29.5 bits (63), Expect = 3.0 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -2 Query: 665 LWIKRPMPIATCGNRLRQHNSSCIHTLEYTS*VNSSCYFPY*DRSYSLRTQFFVHTKKIY 486 LW I C R S I T + V SC FP+ R Y LR FV +K+++ Sbjct: 397 LWNIESWKIIRCAFS-RSITGSRIITTTRINEVAESCCFPHVHRVYKLRPLHFVDSKRLF 455 >03_05_0554 - 25551220-25551310,25551562-25551695,25552115-25552221, 25552359-25552437,25552524-25552613,25552790-25553044, 25553388-25553537,25553677-25553976 Length = 401 Score = 29.5 bits (63), Expect = 3.0 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +3 Query: 501 VHKKLRSKRVAPVLIREITRRVNLTGIF 584 +H+ LR +APV+ R+ T V++ G F Sbjct: 267 IHEALRLANIAPVMFRKATEDVHIKGFF 294 >10_07_0009 - 11770674-11771000,11771079-11771378,11771487-11771807 Length = 315 Score = 29.1 bits (62), Expect = 3.9 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +3 Query: 42 LNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPEEI 188 ++ Q KP TT +A + +PK +IIA + + LP SP +I Sbjct: 1 MSQQGKPISTTTSGSSRARTPRTGNKIPKERFRIIAVDAVGLPTSPRKI 49 >01_05_0687 + 24288648-24292746,24293737-24293844,24294333-24294442, 24295208-24295282 Length = 1463 Score = 29.1 bits (62), Expect = 3.9 Identities = 16/60 (26%), Positives = 25/60 (41%) Frame = +3 Query: 57 KPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQWDTL 236 +P E+ + +Q P P + ++EP ELP P YT PD + D + Sbjct: 232 EPPTPPLESGQEGFQQQQPHPPPTTHPECDSSEPAELPLPPTSPAEIAYTSPDSVEVDVV 291 >01_02_0106 - 11175200-11175385,11175463-11175496,11175987-11176247, 11176501-11176831,11176899-11177589,11177611-11178156, 11178441-11178680 Length = 762 Score = 29.1 bits (62), Expect = 3.9 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +3 Query: 276 LLNENYVEDDDCMFRFDYQTDFL-KWALQPPGWKMEWHCGVRVVKSGRLVGFISAT 440 L Y DDC ++ + FL +WAL+ W+M + K +GF+ T Sbjct: 567 LAGPTYFATDDCPEKYKHGKAFLLEWALKEGPWEMRRMQYMDAKKKKEPIGFLDPT 622 >11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 Length = 581 Score = 28.3 bits (60), Expect = 6.9 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 111 TQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQW 227 T P+ K ++ ANE E+ K EE++ + Y P W Sbjct: 17 TTPLHKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPW 55 >02_05_0374 + 28381456-28381785,28382302-28382555,28382665-28382773, 28383272-28383410,28383525-28383582,28384179-28384196, 28384301-28384423,28384483-28384681,28384763-28384796, 28385044-28385153 Length = 457 Score = 28.3 bits (60), Expect = 6.9 Identities = 23/90 (25%), Positives = 37/90 (41%) Frame = +3 Query: 9 SLKDLKMAMEVLNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPEEI 188 ++K K + L Q P + T + F+ST V K ++ + + + K P Sbjct: 270 TIKPTKWSYPGGGLNQIPGECTISGDIRLTPFYSTTSVVKKLQEYVHDINENIEKLPTRG 329 Query: 189 RAEPYTLPDGFQWDTLNLNEPLVLKELYTL 278 Y LPD L +N PL+ +L L Sbjct: 330 PVSKYVLPDENLRGRLIINSPLLTIDLARL 359 >09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 Length = 383 Score = 27.9 bits (59), Expect = 9.1 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 111 TQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQW 227 T P+ K ++ ANE E+ K EE++ + Y P W Sbjct: 119 TTPLYKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPW 157 >03_04_0214 + 18688480-18688832,18688956-18688999,18689039-18689101, 18689883-18689956,18691526-18692017 Length = 341 Score = 27.9 bits (59), Expect = 9.1 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +3 Query: 39 VLNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKS 176 VLNL+ T+ L PVP+ E+++A P E P+S Sbjct: 267 VLNLKVGKIVTSVPVLQSTNSLTEPLPVPEPIEEVMAISPFEAPES 312 >03_02_1029 - 13488535-13493037 Length = 1500 Score = 27.9 bits (59), Expect = 9.1 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 111 TQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQW 227 T P+ K ++ ANE E+ K EE++ + Y P W Sbjct: 561 TTPLYKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPW 599 >03_02_1026 + 13313672-13313876,13341211-13342005,13363815-13363855, 13363967-13364140 Length = 404 Score = 27.9 bits (59), Expect = 9.1 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 111 TQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQW 227 T P+ K ++ ANE E+ K EE++ + Y P W Sbjct: 143 TTPLYKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPW 181 >02_05_0994 - 33369971-33370759,33370856-33370956,33371092-33371093, 33373009-33373610 Length = 497 Score = 27.9 bits (59), Expect = 9.1 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +3 Query: 123 PKMDEKIIANEPIELPKSPEEIR 191 PKMD+++ E + P SPE+I+ Sbjct: 359 PKMDDEVEVMEQMSTPNSPEDIK 381 >01_05_0178 - 18971075-18971863,18971960-18972197,18972791-18973041 Length = 425 Score = 27.9 bits (59), Expect = 9.1 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +3 Query: 123 PKMDEKIIANEPIELPKSPEEIR 191 PKMD+++ E + P SPE+I+ Sbjct: 287 PKMDDEVEVMEQMSTPNSPEDIK 309 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,783,732 Number of Sequences: 37544 Number of extensions: 410103 Number of successful extensions: 972 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 948 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 972 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1992480932 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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