Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0523
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28073| Best HMM Match : NMT (HMM E-Value=0) 227 1e-59
SB_7754| Best HMM Match : NMT_C (HMM E-Value=0) 174 7e-44
SB_7828| Best HMM Match : NMT (HMM E-Value=3.6e-11) 174 7e-44
SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_7328| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_51412| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_51793| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_30657| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_2673| Best HMM Match : UPF0154 (HMM E-Value=1.9) 31 1.00
SB_16082| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_51518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_47184| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_43357| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_37719| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_34389| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_31949| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_25885| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_22954| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_21699| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_16046| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_54957| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_54460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_44605| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_36897| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_35458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_29847| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_29479| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_21321| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12) 31 1.3
SB_15772| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_8012| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_5659| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_5116| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_1868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_31617| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_50307| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_46054| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_29718| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_15930| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_4251| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_54841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_49541| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_45414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_25809| Best HMM Match : zf-C5HC2 (HMM E-Value=3.9) 29 3.0
SB_25125| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_22449| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_51859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_50640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_41160| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_40924| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_39599| Best HMM Match : Extensin_2 (HMM E-Value=0.09) 29 3.0
SB_37764| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_33393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_31748| Best HMM Match : zf-HYPF (HMM E-Value=8.4) 29 3.0
SB_23633| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_21243| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_14480| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_11595| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_5408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_26256| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=8.9) 29 4.0
SB_1936| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_31553| Best HMM Match : RCSD (HMM E-Value=2.7) 29 5.3
SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_26198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_55774| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_52357| Best HMM Match : fn2 (HMM E-Value=4.9) 28 9.3
SB_49019| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_20862| Best HMM Match : fn2 (HMM E-Value=3.4) 28 9.3
SB_17483| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_38281| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_21690| Best HMM Match : fn2 (HMM E-Value=3.4) 28 9.3
SB_9144| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_2775| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_2013| Best HMM Match : Lipase_GDSL (HMM E-Value=2.7) 28 9.3
>SB_28073| Best HMM Match : NMT (HMM E-Value=0)
Length = 280
Score = 227 bits (554), Expect = 1e-59
Identities = 100/152 (65%), Positives = 123/152 (80%), Gaps = 1/152 (0%)
Frame = +3
Query: 12 LKDLKMAMEVLNLQQ-KPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPEEI 188
LK+L+ EVL L + KPAKTTEEA K YQFW TQPVPK+D+++ + PIE KS EEI
Sbjct: 93 LKNLQRYFEVLRLNEGKPAKTTEEAKKKTYQFWDTQPVPKIDDEVKESGPIEDNKSVEEI 152
Query: 189 RAEPYTLPDGFQWDTLNLNEPLVLKELYTLLNENYVEDDDCMFRFDYQTDFLKWALQPPG 368
R EPY+LP GF W+T+++ +P VLKELYTLLNENYVEDDD MFRFDY ++FL+WAL+PPG
Sbjct: 153 RPEPYSLPQGFVWNTMDIGDPAVLKELYTLLNENYVEDDDNMFRFDYSSEFLQWALKPPG 212
Query: 369 WKMEWHCGVRVVKSGRLVGFISATPADLRIYN 464
WKM+WHCGVRV + +LVGFISA PA + +YN
Sbjct: 213 WKMDWHCGVRVASNNKLVGFISAIPAHINVYN 244
>SB_7754| Best HMM Match : NMT_C (HMM E-Value=0)
Length = 247
Score = 174 bits (423), Expect = 7e-44
Identities = 78/90 (86%), Positives = 86/90 (95%)
Frame = +3
Query: 477 VVEINFLCVHKKLRSKRVAPVLIREITRRVNLTGIFQGVYTAGIVLPKPIATCRYWHRSL 656
+VEINFLCVHKKLRSKRVAPVLIREITRRVN GIFQ VYTAG+VLPKP+A CRYWHRSL
Sbjct: 2 MVEINFLCVHKKLRSKRVAPVLIREITRRVNKEGIFQAVYTAGVVLPKPVACCRYWHRSL 61
Query: 657 NPKKLIDIKFSHLSRNMTMQRTLKLFKLPD 746
NPKKLID+KFSHLSRNMTMQRT+KL++LP+
Sbjct: 62 NPKKLIDVKFSHLSRNMTMQRTVKLYRLPE 91
>SB_7828| Best HMM Match : NMT (HMM E-Value=3.6e-11)
Length = 104
Score = 174 bits (423), Expect = 7e-44
Identities = 78/90 (86%), Positives = 86/90 (95%)
Frame = +3
Query: 477 VVEINFLCVHKKLRSKRVAPVLIREITRRVNLTGIFQGVYTAGIVLPKPIATCRYWHRSL 656
+VEINFLCVHKKLRSKRVAPVLIREITRRVN GIFQ VYTAG+VLPKP+A CRYWHRSL
Sbjct: 2 MVEINFLCVHKKLRSKRVAPVLIREITRRVNKEGIFQAVYTAGVVLPKPVACCRYWHRSL 61
Query: 657 NPKKLIDIKFSHLSRNMTMQRTLKLFKLPD 746
NPKKLID+KFSHLSRNMTMQRT+KL++LP+
Sbjct: 62 NPKKLIDVKFSHLSRNMTMQRTVKLYRLPE 91
>SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 35.5 bits (78), Expect = 0.046
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSILKVRS 241
PH HH+AI + ++ P+S + +Q +HH PH+ H T+ I+ S
Sbjct: 490 PHHHHSAITTIHIIITAPLSPSTSSSQR---HHHHPHHHHSAIITIHIIITAPS 540
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSILKVRSNS 235
PH +H+AI N ++ P + +Q +HH P+++H T+ I+ +R+ S
Sbjct: 654 PHHYHSAITTINIIITAPSPPSTSSSQR---HHHHPYHYHSAITTIHIIILIRAPS 706
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSILKVRS 241
PH HH+AI + ++ P + +Q +HH PH++H T+ I+ S
Sbjct: 622 PHHHHSAITTIHIIITAPSPPSTSSSQR---HHHHPHHYHSAITTINIIITAPS 672
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSILKVRS 241
PH HH+AI + ++ P + +Q +HH PH+ H T+ I+ +S
Sbjct: 230 PHHHHSAITTIHIIITAPSPPSTSSSQR---HHHHPHHHHSAIITIHIIITAQS 280
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSIL 253
PH HH+AI + ++ P S + +Q +HH PH+ H T+ I+
Sbjct: 458 PHHHHSAIITIHIIITAPSSPSTSSSQR---HHHHPHHHHSAITTIHIII 504
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSILKVRS 241
PH HH+AI + ++ P + +Q +HH PH+ H T+ I+ S
Sbjct: 68 PHHHHSAITTIHIIITAPSPPSTSSSQR---HHHHPHHHHSAIITIHIIITAPS 118
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHN 289
PH HH+AI + ++ P S + +Q NHH PH+
Sbjct: 164 PHHHHSAITTIHIIITAPSSPSISSSQR---NHHHPHH 198
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHN 289
PH HH+AI + ++ P S + +Q NHH PH+
Sbjct: 326 PHHHHSAITTIHIIITAPSSPSISSSQR---NHHHPHH 360
Score = 31.1 bits (67), Expect = 1.00
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSILKVRSN 238
PH HH+AI + ++ P + +Q +HH PH+ H T+ I+ S+
Sbjct: 294 PHHHHSAIITIHIIITVPSPPSTSSSQR---HHHHPHHHHSAITTIHIIITAPSS 345
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSILKVRS 241
PH HH+AI + + P + +Q Y+HH PH+ H T+ I+ S
Sbjct: 36 PHHHHSAITTIHIITTVPSPTSTSSSQR--YHHH-PHHHHSAITTIHIIITAPS 86
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSIL 253
PH HH+AI + ++ P S + +Q ++HH H+ H T + I+
Sbjct: 392 PHHHHSAITTIHIIITAPSSPSISSSQR--HHHHPHHHSHHSAITNIHII 439
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 399 HEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSILKVRS 241
H HH+AI + ++ P + +Q Y+HH PH+ H T+ I+ S
Sbjct: 199 HSHHSAITNIHIIITAPSPPSTSSSQR--YHHH-PHHHHSAITTIHIIITAPS 248
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -1
Query: 399 HEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSILKVRSN 238
H HH+AI + ++ P + +Q +HH PH+ H T+ I+ S+
Sbjct: 427 HSHHSAITNIHIIITAPSPPSTSSSQR---HHHHPHHHHSAIITIHIIITAPSS 477
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -1
Query: 399 HEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSILKVRSN 238
H HH+AI + ++ P + +Q +HH PH+ H T+ I+ S+
Sbjct: 361 HSHHSAITNIHIIITVPSPPSTSSSQR---HHHHPHHHHSAITTIHIIITAPSS 411
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 402 PHEHHNAIPFSNQVVVEPISKNQFGNQNETYNHHLPHNFH*VKCTVLSIL 253
PH H+AI + ++ P + Q Y+HH PH+ H T+ I+
Sbjct: 754 PHHQHSAIITIHIIITAPSPPSTSSTQR--YHHH-PHHHHSAIITIYIIV 800
>SB_7328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P WKM
Sbjct: 3 RFDYETDALPTALTTPSWKM 22
>SB_51412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPSWEM 22
>SB_51793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPSWEM 22
>SB_30657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 31.1 bits (67), Expect = 1.00
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P WKM
Sbjct: 61 RFDYETDALPIALTTPTWKM 80
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALAIALTTPTWEM 22
>SB_2673| Best HMM Match : UPF0154 (HMM E-Value=1.9)
Length = 322
Score = 31.1 bits (67), Expect = 1.00
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 189 RAEPYTLPDGFQ-WDTLNLNEPLVLKELYTLLNENY-VEDDDCMFRFDYQTDFL 344
+ P + D Q W L+ LK+LY +Y + +++C F F Y+T+FL
Sbjct: 130 KGRPVVVTDAAQNWSALDTFNFTFLKKLYDSSKNSYKITEEECQF-FPYKTEFL 182
>SB_16082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 288 NYVEDDDCMFRFDYQTDFLKWALQPPGWKM 377
+Y D + RFDYQTD L AL P W+M
Sbjct: 34 DYRTHDLQISRFDYQTDALPIALTTPTWEM 63
>SB_51518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 25 RFDYQTDALPIALTTPTWEM 44
>SB_47184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 18 RFDYQTDALPIALTTPTWEM 37
>SB_43357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RF+Y+TD L AL P WKM
Sbjct: 24 RFEYETDALPTALTTPSWKM 43
>SB_37719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPTWEM 22
>SB_34389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPTWEM 22
>SB_31949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 44 RFDYQTDALPIALTTPTWEM 63
>SB_25885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 44 RFDYQTDALPIALTTPTWEM 63
>SB_22954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 24 RFDYQTDALPIALTTPTWEM 43
>SB_21699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPTWEM 22
>SB_16046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPTWEM 22
>SB_54957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPTWEM 22
>SB_54460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPTWEM 22
>SB_44605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 41 RFDYQTDALPIALTTPTWEM 60
>SB_36897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPTWEM 22
>SB_35458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 18 RFDYQTDALPIALTTPTWEM 37
>SB_29847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 45 RFDYQTDALPIALTTPTWEM 64
>SB_29479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 44 RFDYQTDALPIALTTPTWEM 63
>SB_21321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 44 RFDYQTDALPIALTTPTWEM 63
>SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
Length = 917
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 48 LQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQ 224
L+Q P +EA+ + + QP + + ++ P+E P+ PE R + + DG Q
Sbjct: 609 LEQPPEPLPQEAVEQPAR--KAQPQSQQQQVVVPEPPVEPPQVPEPPRVDRISPFDGMQ 665
>SB_15772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 25 RFDYQTDALPIALTTPTWEM 44
>SB_8012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPTWEM 22
>SB_5659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RF+Y+TD L AL P WKM
Sbjct: 3 RFEYETDALPTALTTPSWKM 22
>SB_5116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 3 RFDYQTDALPIALTTPTWEM 22
>SB_1868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L AL P W+M
Sbjct: 18 RFDYQTDALPIALTTPTWEM 37
>SB_31617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALPIALTTPSWEM 22
>SB_50307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL+ P W+M
Sbjct: 41 RFDYETDALPIALRTPTWEM 60
>SB_46054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALPIALTTPSWEM 22
>SB_29718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL+ P W+M
Sbjct: 3 RFDYETDALPIALRTPTWEM 22
>SB_15930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALPIALTTPSWEM 22
>SB_4251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALPIALTTPSWEM 22
>SB_54841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALPIALTTPTWEM 22
>SB_49541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 18 RFDYETDALPIALTTPTWEM 37
>SB_45414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 13 RFDYETDALPIALTTPTWEM 32
>SB_25809| Best HMM Match : zf-C5HC2 (HMM E-Value=3.9)
Length = 149
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 44 RFDYETDALPIALTTPTWEM 63
>SB_25125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 17 RFDYETDALPIALTTPTWEM 36
>SB_22449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALPIALTTPTWEM 22
>SB_51859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 114 RFDYETDALPIALTTPTWEM 133
>SB_50640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 40 RFDYETDALPIALTTPTWEM 59
>SB_41160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALPIALTTPTWEM 22
>SB_40924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 17 RFDYETDALPIALTTPTWEM 36
>SB_39599| Best HMM Match : Extensin_2 (HMM E-Value=0.09)
Length = 564
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 457 ILKSAGVAEMKPTSRPDFTTRTPQCHSIF 371
IL+ A ++ + P + TT+TP+CH +F
Sbjct: 358 ILRVANISRITPYALIITTTKTPRCHKVF 386
>SB_37764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALPIALTTPTWEM 22
>SB_33393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALPIALTTPTWEM 22
>SB_31748| Best HMM Match : zf-HYPF (HMM E-Value=8.4)
Length = 98
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 24 RFDYETDALPTALTRPTWEM 43
>SB_23633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 61 RFDYETDALPIALTTPTWEM 80
>SB_21243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 102 RFDYETDALPIALTTPTWEM 121
>SB_14480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALPIALTTPTWEM 22
>SB_11595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 3 RFDYETDALAIALTTPTWEM 22
>SB_5408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+TD L AL P W+M
Sbjct: 119 RFDYETDALPIALTTPTWQM 138
>SB_26256| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=8.9)
Length = 313
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 51 QQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSP 179
++ P KTTE A+ +TQP K+D I P P P
Sbjct: 14 EELPVKTTEPAVLTPALTSATQPSVKLDRLSIPGNPFFTPSGP 56
>SB_1936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDYQTD L L P W+M
Sbjct: 3 RFDYQTDALPIGLTTPTWEM 22
>SB_31553| Best HMM Match : RCSD (HMM E-Value=2.7)
Length = 139
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 120 VPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQWDTLNLNEPL 254
VP +D N ++PKSPE++++ +P + + N + PL
Sbjct: 43 VPPIDTGDNENGDYDVPKSPEDVQSSTEDVPSSSKQELPNYDMPL 87
>SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 123 PKMDEKIIANEPIELPKSPEEIRAEPYTLPD 215
PK +EK+ EP+E+ +E + EPY PD
Sbjct: 284 PKSEEKL---EPMEVDDKKKESKLEPYWFPD 311
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 162 ELPKSP-EEIRAEPYTLPDGFQWDTLNLNEPLVLKELYTLLNENYVEDDDCMFRFDYQTD 338
EL KS E +R EP +P Q L EP +KEL + + + F ++
Sbjct: 933 ELKKSVLESLRQEPAPIPPEVQHGWWRLTEPSNIKELVKACHSRGIREKMLQKNFQKYSE 992
Query: 339 FLKWALQPP 365
++ + + P
Sbjct: 993 YISSSCKKP 1001
>SB_26198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 321 FDYQTDFLKWALQPPGWKM 377
FDY+TD L AL P W+M
Sbjct: 4 FDYETDALSTALTTPTWEM 22
>SB_55774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 321 FDYQTDFLKWALQPPGWKM 377
FDY+TD L AL P W+M
Sbjct: 19 FDYETDALPTALTTPTWEM 37
>SB_52357| Best HMM Match : fn2 (HMM E-Value=4.9)
Length = 100
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 321 FDYQTDFLKWALQPPGWKM 377
FDY+TD L AL P W+M
Sbjct: 27 FDYETDALPTALTTPTWEM 45
>SB_49019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 321 FDYQTDFLKWALQPPGWKM 377
FDY+TD L AL P W+M
Sbjct: 4 FDYETDALPTALTTPTWEM 22
>SB_20862| Best HMM Match : fn2 (HMM E-Value=3.4)
Length = 100
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 321 FDYQTDFLKWALQPPGWKM 377
FDY+TD L AL P W+M
Sbjct: 27 FDYETDALPTALTTPTWEM 45
>SB_17483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 321 FDYQTDFLKWALQPPGWKM 377
FDY+TD L AL P W+M
Sbjct: 4 FDYETDALPTALTTPTWEM 22
>SB_38281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 318 RFDYQTDFLKWALQPPGWKM 377
RFDY+T+ L AL P W+M
Sbjct: 3 RFDYETEALPIALTTPTWEM 22
>SB_21690| Best HMM Match : fn2 (HMM E-Value=3.4)
Length = 100
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 321 FDYQTDFLKWALQPPGWKM 377
FDY+TD L AL P W+M
Sbjct: 27 FDYETDALPTALTTPTWEM 45
>SB_9144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 321 FDYQTDFLKWALQPPGWKM 377
FDY+TD L AL P W+M
Sbjct: 27 FDYETDALPTALTTPTWEM 45
>SB_2775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = -1
Query: 372 SNQVVVEPISKNQFGNQNETY--NHHLPHNFH*VKCTVLSILKVRSNSKY 229
S+QV E ++K+++ N ++T+ N+H H+F+ +C + K +S Y
Sbjct: 26 SSQVWCELLAKDKY-NASDTFDPNNHTSHHFNIPECKTRQLSKTTRSSFY 74
>SB_2013| Best HMM Match : Lipase_GDSL (HMM E-Value=2.7)
Length = 518
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +3
Query: 111 TQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQWDTLNLNEPLVLKELYTLLNEN 290
T VP++ E ++ + P+E+ +P+ + F TLNL +PL ++ +T + +
Sbjct: 330 TTAVPRLPEPLLLDNPLEIITNPKCSTSVTPNYKQDFYHRTLNL-KPLSIQG-FTFIVKR 387
Query: 291 YVEDD 305
Y+ D
Sbjct: 388 YLNFD 392
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,201,143
Number of Sequences: 59808
Number of extensions: 497650
Number of successful extensions: 1448
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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