Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0521
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    25   1.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   6.6  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    23   6.6  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    23   6.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   6.6  
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    23   8.7  

>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
 Frame = -3

Query: 399 LNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR-------SRDARVKKKTDSID 241
           L RS   +++ ++T ++  +    Y + R +     DLR         D  ++   D +D
Sbjct: 62  LRRSSRPSSMRASTMKKLNEWLDAYQQERGKGRSMTDLRLAGYGSSEEDENLRAPRDFLD 121

Query: 240 LRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGST 136
              PN L++       E    K    EPP+ +  T
Sbjct: 122 AGKPNDLQQEGETLNKEPVETKPQESEPPEMQEVT 156


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 140 EPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSM 247
           + R   GSK     S  + S+ E  RR+P    RSM
Sbjct: 106 DARPRFGSKAAAANSSATSSESEDERRTPPQDMRSM 141


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 409 RAESQQIAARRCSTEHNTPPGTEVVYRL 326
           R  S  +  R CS  H  P   E VYR+
Sbjct: 485 RVVSVSLRCRYCSVPHYEPLDPERVYRV 512


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 409 RAESQQIAARRCSTEHNTPPGTEVVYRL 326
           R  S  +  R CS  H  P   E VYR+
Sbjct: 485 RVVSVSLRCRYCSVPHYEPLDPEHVYRV 512


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +2

Query: 11   FGHLVH-ALGRAAGGAKLPSAGLCLNASKA 97
            +  L+H A+G   GG  L   G CL   +A
Sbjct: 936  YSFLMHTAVGHGGGGQSLSGPGSCLEDFRA 965


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 432 FTDESPGAGLSLNRSQHDAALPSTTPRQERKSS 334
           +T ++PG     NRSQ       T P Q  + S
Sbjct: 25  YTRQNPGTNRPPNRSQKAKQTVKTPPAQGNRRS 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,372
Number of Sequences: 2352
Number of extensions: 10311
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)