Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0519
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   2.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   3.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   3.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.6  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   6.0  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 195 NSAVSGFSFFKTSARWVPSMLDTKWT 118
           NSA+ G  FF  +  W P +++ KW+
Sbjct: 270 NSAIEGIIFFNLAKSW-PQLIE-KWS 293


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
 Frame = -1

Query: 749 VLSVGSRXSPPXDGPXGV----FHFGLLNASXTCHCSPYRPAGNTLRICVDIDRKAAAHG 582
           VLSVG+   PP D P        H   ++        P R + ++ RI      K+ + G
Sbjct: 25  VLSVGNENPPPEDTPLSFKNIESHLNAISQITNSTLDPGRKSPSSPRISSPSSTKSGSPG 84

Query: 581 SL 576
            L
Sbjct: 85  FL 86


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 377 WDWVGGRYSLWSAIGLSISLYIGH 448
           +D +GG YS WS     +  ++ H
Sbjct: 143 FDTLGGLYSTWSKKSKQVEYFLIH 166


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 377 WDWVGGRYSLWSAIGLSISLYIGH 448
           +D +GG YS WS     +  ++ H
Sbjct: 143 FDTLGGLYSTWSKKSKQVEYFLIH 166


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 497 FVTAPLEKNAPVILALLG-VWYHNFY 571
           F   PL +NA ++L LLG + YH  +
Sbjct: 49  FAWWPLTRNALLVLILLGALTYHAIF 74


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 497 FVTAPLEKNAPVILALLG-VWYHNFY 571
           F   PL +NA ++L LLG + YH  +
Sbjct: 49  FAWWPLTRNALLVLILLGALTYHAIF 74


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
          acetylcholinesterase protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 55 PNTNVDHICYSLXLYTP 5
          PNTN+   C  L ++ P
Sbjct: 5  PNTNISEDCLYLNIWVP 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,879
Number of Sequences: 336
Number of extensions: 3555
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)