Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0518
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   6.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   6.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   6.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   6.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   6.0  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = +1

Query: 187 KEVVDIPVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPP------QHQEHE 348
           KEV D+P   + E  KP       +F     NE+I  PL D+  P         +H+   
Sbjct: 25  KEVFDVPNNFLPERYKPIGVQIANRFG-EQANEKI--PLKDITPPDLEGILDLGRHENFS 81

Query: 349 TQNPEHHEDAEKIV 390
              P+H + A K++
Sbjct: 82  LFIPKHRKVAGKLI 95


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 23/144 (15%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
 Frame = +1

Query: 100 VVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSD--LEKFEVP 273
           +V ++  +Q    + + IK+I         + +  P+K++VE+ +    SD   E+ +  
Sbjct: 179 IVLHMKEDQTEFLEEHKIKEIVKK----HSQFIGYPIKLVVEKEREKELSDDEAEEEKKE 234

Query: 274 DENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEV 453
           +E E+  +    + + G  + ++ + ++ +  +  ++  +  +    T  I  R      
Sbjct: 235 EEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKTKPIWTRNADDIS 294

Query: 454 SDGIGKWYARTEQINELQASLQHF 525
            +  G++Y       E   +++HF
Sbjct: 295 QEEYGEFYKSLTNDWEDHLAVKHF 318


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 107 STTFKGLSSASGTLSGMEAARAASTNIVSNRAACS 3
           STT + LSS + + S   +   A TN  +++++ S
Sbjct: 160 STTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQS 194


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 298 PLVDLRNPGPPQHQEHETQNPEHHED 375
           P ++ +N   P  + HE     HHE+
Sbjct: 96  PPINHQNYNEPYQRTHENMLLRHHEE 121


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 298 PLVDLRNPGPPQHQEHETQNPEHHED 375
           P ++ +N   P  + HE     HHE+
Sbjct: 96  PPINHQNYNEPYQRTHENMLLRHHEE 121


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 298 PLVDLRNPGPPQHQEHETQNPEHHED 375
           P ++ +N   P  + HE     HHE+
Sbjct: 96  PPINHQNYNEPYQRTHENMLLRHHEE 121


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 334 HQEHETQNPEHHE 372
           HQ+H  QN  H E
Sbjct: 314 HQQHHQQNMSHEE 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,990
Number of Sequences: 336
Number of extensions: 2863
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)