Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0518
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 32 0.076
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 29 0.94
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 28 1.2
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 2.9
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 27 3.8
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 3.8
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 27 3.8
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 27 3.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 5.0
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 26 5.0
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 26 5.0
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 26 6.6
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 26 6.6
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 26 6.6
SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr ... 26 6.6
SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces pom... 26 6.6
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 26 6.6
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 25 8.7
SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces ... 25 8.7
SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 25 8.7
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 8.7
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1052
Score = 32.3 bits (70), Expect = 0.076
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Frame = +1
Query: 94 LNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVK----VIVEEIKPSLKSDLEK 261
+ VE ELID+A DI + + VD V+ ++ +E++ + + D+EK
Sbjct: 867 IGFVEKPDKVTELIDEAEENIDISQDISMTETNAVDDEVQAENSILQDEVEETRQDDIEK 926
Query: 262 FEVPDENE-EIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAE 423
E+ D E + L L + E Q+PE ++S +ND T E
Sbjct: 927 DELEDIKEVKEDENLTTLEETIEIPANDIEVQDPEQC----SCMNSTENDNITTE 977
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 28.7 bits (61), Expect = 0.94
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Frame = +1
Query: 106 ENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVP---- 273
+N E +D +N +++ + +NK E ++ + EE K S+ E +
Sbjct: 78 DNSKKESTNLDDSNMLEEPKHHDNSNK-ESTNLDDLNMSEEPKHHDSSNKESTNLDNSNM 136
Query: 274 DENEEIK-------RPLVDLRNPGPPQHQEHETQNPEHHEDA--EKIVSSVKNDINTAE 423
DE+E K +P D RN GP Q + + + PE H ++ E+ + + ++ N E
Sbjct: 137 DESENQKNFKIEEPKPSGDFRNEGPKQCDDSKIEKPELHVNSKIEEPIHRIDSEHNEPE 195
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 28.3 bits (60), Expect = 1.2
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +1
Query: 49 AASIPDKVPE--AEDKPL--NVVENLSSEQELIDQANTIKDI-DNSLRANKKEVVDIPVK 213
A ++ VPE AED + + V SE + +++ ++D +NS+ +KK +P
Sbjct: 502 AIALQSSVPENKAEDSVVLKSSVPEDKSEDSVPSKSSVLEDKHENSVEIDKKADDSLPSN 561
Query: 214 VIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPG 324
E PS+ + + + P+ + + P V PG
Sbjct: 562 NKTEGYTPSVVREEKNYSEPNASPSVIPPRVPTPVPG 598
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 2.9
Identities = 31/134 (23%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Frame = +1
Query: 37 LAARAASIPDKVPEAED--KPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPV 210
+A+ I K E +D L+VV + E L+ + T K +++ + N+ + ++ V
Sbjct: 1027 IASLQTEIEKKRAENDDLQSKLSVVSS-EYENLLLISSQTNKSLED--KTNQLKYIEKNV 1083
Query: 211 KVIVEEIKPSLKSDLEKF-----EVPDENEEIKRPLVDLRNPGPPQHQ--EHETQNPEHH 369
+ +++E K +LE+ ++ +EN +IK L+ LR QH + + +
Sbjct: 1084 QKLLDE-KDQRNVELEELTSKYGKLGEENAQIKDELLALRKKSKKQHDLCANFVDDLKEK 1142
Query: 370 EDAEKIVSSVKNDI 411
DA + +++ KN++
Sbjct: 1143 SDALEQLTNEKNEL 1156
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +1
Query: 169 SLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHE 348
SL N +++ ++ E I+ S + E+ ENE + +DLR ++ E
Sbjct: 5 SLSPNVEDLKKKQIRQYKEIIRISKAQSIRIKELQLENERLLSENIDLRTTAINLEEQLE 64
Query: 349 TQNPEHHEDAEKIVS 393
T E+ E+ K+ +
Sbjct: 65 TVQNENEENKTKLAA 79
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.6 bits (56), Expect = 3.8
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +1
Query: 238 SLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINT 417
S KSD K P + E +P+ +P +H++ EK + D+++
Sbjct: 899 SSKSDAAKSIKPQKPEPALKPVEGTADP---------KSTKRNHQETEK---TADTDVSS 946
Query: 418 AEIALRQGFQEVSDGIGKWYAR---TEQINELQASLQHFQENFRRS 546
E RQ +V+D +G+ + +EQ++ Q + + E+ +S
Sbjct: 947 TEPVKRQKTADVNDDVGEEEVKQSVSEQVDSAQLTSEPKSESLPKS 992
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 328 PQHQEHETQNPEHHEDAEKIVSSVKNDIN 414
P +++ T++ E HED + V +++D N
Sbjct: 24 PNNKKSRTRSTESHEDRQAKVQKIQSDFN 52
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 317 IPGPRSIKSTKHRILNTTKMLKKSFLPSKMTLTQRK 424
+P P S+ HR LN K+ F P + T++K
Sbjct: 224 LPSPVSLSRYMHRSLNWKKLYDIGFAPFPLGSTEKK 259
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +1
Query: 250 DLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSS 396
D E + P + E K P + GP + H+ +H+E E+ + S
Sbjct: 388 DKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHQGPKEKHNERPEQNMQS 436
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 26.2 bits (55), Expect = 5.0
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 220 VEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIV--S 393
+ +IKP S+ ++F+ ++ + PL+D+ +P H+ N +KI +
Sbjct: 184 MNKIKPKNDSESDRFKRNSQSLSQQSPLLDVHSPDNSNHRTMLNINNSSPIKPKKIFKPN 243
Query: 394 SVKNDIN 414
VKN I+
Sbjct: 244 EVKNRIS 250
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 235 PSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQN 357
PS K E ++ E I + VD+ NPG + ET N
Sbjct: 40 PSSKFQNEPLQLNSEESSIMQRYVDMLNPGATFVNDSETFN 80
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 25.8 bits (54), Expect = 6.6
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Frame = +1
Query: 67 KVPEAEDKPLNVVENLSSEQELIDQANTIKDI--DN-----SLRANKKEV----VDIPVK 213
++ E D+ L+ ++ +++Q D N +KD+ DN S+ A++ + V+ P+K
Sbjct: 604 RISELNDRELDEIDWQAADQ---DVENALKDLSDDNDFDTGSISASQSQPEALEVNTPIK 660
Query: 214 VIVEEIKPSLKSDLEKFEVPDENEE 288
+ I+PS D EK ++N E
Sbjct: 661 RKADLIQPSYNYDGEKRRKENDNHE 685
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 25.8 bits (54), Expect = 6.6
Identities = 20/89 (22%), Positives = 35/89 (39%)
Frame = +1
Query: 94 LNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVP 273
L N ++Q + NT + + +E P E KP+ E +
Sbjct: 65 LTAAPNTHAQQANLQSGNTSITHETQSTSRGQEATTSPSLSASHE-KPARPQTGEGSDNE 123
Query: 274 DENEEIKRPLVDLRNPGPPQHQEHETQNP 360
DE+E+I + DL + + Q E ++P
Sbjct: 124 DEDEDIDALIEDLYSQDQEEEQVEEEESP 152
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 25.8 bits (54), Expect = 6.6
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 325 PPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQ 492
PP H ++ TQ HEDA+ S + + I R ++ G + EQ
Sbjct: 609 PPLHLKNTTQTNNAHEDAQSSNLSQNHSLFYERIPQRPSYRIEKQNKGIYEDENEQ 664
>SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 451
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -2
Query: 725 QFEXLQIADXDRLLKFVSKDLRPDSIVSKRSFILRFPR 612
+F +Q DRLL+F S++ + + KRS+++ P+
Sbjct: 240 EFLLVQQGKSDRLLEFTSEEKEALAKLPKRSYLIDNPK 277
>SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 537 KIFLEMLQAGLELVNLLGTSVPFSNTV 457
K+ LE++Q + + NL+ T V +NT+
Sbjct: 314 KLELEVVQFQMSIANLINTQVEVTNTI 340
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 713 LQIADXDRLLKFVSKDLRPDSIVSKRSFILRFPRQK 606
L + D+ LKF +K LR + F+ + +QK
Sbjct: 19 LNAGEYDKALKFANKSLRIHATTEGEDFVKQIEKQK 54
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 610 CRGKRKIKLLFETIESGLKSLETNFNRR 693
C + +KL F T+E LK+LE + + +
Sbjct: 901 CESMKNVKLDFVTLEDWLKALEKDVDEK 928
>SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 199
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 320 PGPRSIKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTV 463
P + + K I +K++ + LP+ +T Q K LFVK+ C+ V
Sbjct: 39 PAVNTASALKSVISEESKIIVSN-LPTDVTEAQVKELFVKSIGPCKRV 85
>SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 391 SSVKNDINTAE------IALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFRRSN 549
S +K+ +N+ E +++R+ FQ+ SD K +Q+N L ENF N
Sbjct: 276 SPIKSSLNSLECNPSNLLSVRKNFQQSSDSYLKSNKSFDQLNNLVGLSTGNSENFTPEN 334
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.4 bits (53), Expect = 8.7
Identities = 27/167 (16%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Frame = +1
Query: 70 VPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKS 249
+P + D+ + + S E +L+ ++N++ DN + K + ++ V+ + + P L++
Sbjct: 1251 LPVSNDQTDTPIISGSQEVQLLYESNSVLRKDNDAKLGKIQELEKEVEKLNASLNP-LQT 1309
Query: 250 DLEKFEVPDENEEIKRPLVDLRNPGPPQH-----QEHETQNPEHHEDAEKIVSSVKNDIN 414
++ + + + L+ N ++E +P E+ +K +++ +
Sbjct: 1310 EINELKAEIGAKTASLNLMKEYNSRWKLRFQSVLNKYERVDPTQLEELKKNCEALEKEKQ 1369
Query: 415 TAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFRRSNTK 555
E L++ +E +Q+N L +++ ++ ++NTK
Sbjct: 1370 ELETKLQETAKETD-------TFKQQVNSLNEEVENLKKEVEQANTK 1409
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,600,964
Number of Sequences: 5004
Number of extensions: 50352
Number of successful extensions: 236
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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