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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0518
         (750 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375...    36   0.026
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466...    33   0.18 
05_01_0143 - 944169-947273                                             31   0.74 
05_01_0558 - 4880811-4880996,4881098-4881178,4881247-4881393,488...    31   0.98 
06_02_0346 - 14837982-14838122,14838208-14838327,14838411-148385...    30   2.3  
05_01_0020 + 143273-143592,144278-144371,144466-144537,144675-14...    30   2.3  
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    30   2.3  
03_06_0204 + 32341756-32341843,32341943-32342025,32342690-323427...    29   3.0  
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886...    29   3.9  
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600...    29   3.9  
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277...    29   3.9  
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076...    29   3.9  
08_02_0860 + 21970888-21971833,21973400-21974127                       28   6.9  
02_02_0233 + 8105765-8107840                                           28   6.9  
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176...    28   6.9  
10_08_0520 - 18495118-18498237                                         28   9.1  
07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213           28   9.1  

>03_05_0175 +
           21513767-21513903,21534361-21535385,21537375-21537547,
           21537849-21538679
          Length = 721

 Score = 36.3 bits (80), Expect = 0.026
 Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 2/187 (1%)
 Frame = +1

Query: 64  DKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSL 243
           ++V E E +    +E    E+E+ ++   I++ +  +R   +E  +      V+E +   
Sbjct: 56  EEVEEEEVEEEEEIEEEEVEEEIEEEEEEIEEEEEEVREEVQEAGEE-----VDEEQQGA 110

Query: 244 KSDLEKF-EVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTA 420
             +++K  E  DE+ +   P V  +     + +  E ++ E H D    ++S ++DI   
Sbjct: 111 NEEMQKSKEDADESSKSAIP-VQKQEEDEAEKEIIEAKDEEQHGDK---LASQEHDIGEN 166

Query: 421 EIALRQGFQEVSDGIGKWYARTEQINELQ-ASLQHFQENFRRSNTKVE*NATFY*TS*HH 597
                QG Q+V+DG     A++E+ NE +  S++H  E      ++ + N      S H 
Sbjct: 167 GDVDAQGVQQVADG-ETMEAKSEEQNEAKVTSMEHDIEEGDEKASREQGNRALPSCSDHL 225

Query: 598 RGPFCRG 618
           RG  C G
Sbjct: 226 RG-VCAG 231


>01_07_0374 +
           43144861-43144998,43145695-43145794,43146499-43146651,
           43147383-43150081
          Length = 1029

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 17/69 (24%), Positives = 34/69 (49%)
 Frame = +1

Query: 340 EHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQ 519
           ++ T  P   ++A + +S ++ +I   +            GI K++   +QIN++Q  + 
Sbjct: 252 KNTTSAPIDKDNAREEISRLQKEILVMQTEKEFIKSSYESGIAKYWDLEKQINDMQEQVC 311

Query: 520 HFQENFRRS 546
           HFQ+ F  S
Sbjct: 312 HFQDKFDES 320


>05_01_0143 - 944169-947273
          Length = 1034

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +1

Query: 370 EDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFRRS 546
           E+A++ +S ++ +I   +            G+ K++   +QIN++Q  + +FQE F  S
Sbjct: 130 ENAQEEISRLQKEILVLQTQKEFLKSSYESGMAKYWDLEKQINDMQEEVCYFQEEFNES 188


>05_01_0558 -
           4880811-4880996,4881098-4881178,4881247-4881393,
           4881985-4882029,4882370-4883134
          Length = 407

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 295 RPLVDLRNPGPPQHQEHETQNPEHHEDAEK 384
           RPL  L +P PP  Q  ET+  E  +++E+
Sbjct: 98  RPLPSLASPPPPTQQPQETEEQEQQQESEE 127


>06_02_0346 -
           14837982-14838122,14838208-14838327,14838411-14838564,
           14838793-14838866,14838962-14839095,14839207-14839326,
           14843174-14843308,14843842-14843976,14844343-14845003,
           14845103-14845264,14845348-14845510,14880834-14881021
          Length = 728

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +1

Query: 196 VDIPVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED 375
           +DIP + I++   P+++  L  F VP+        L+ L      +  EH TQ    H+D
Sbjct: 476 IDIPTQGIIQPTAPAVEPALPDFGVPN-------TLLALTAYVQDETAEHNTQGDSSHDD 528

Query: 376 AEKIVSSVKND 408
            + +  S+  D
Sbjct: 529 DDNLSHSLPPD 539


>05_01_0020 +
           143273-143592,144278-144371,144466-144537,144675-144786,
           145179-145327,145484-145510,145931-145981
          Length = 274

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/106 (19%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +1

Query: 64  DKVPEAEDKPLNVVENLSSEQELIDQA-NTIKDIDNSLRANKKEVVDIPVKVIVEEIKPS 240
           + +   +D+ +++++  +  QE + ++ N   DID      + + ++  +      +   
Sbjct: 159 EDIDSLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEELMGELDALEADMDFESNSVPSY 218

Query: 241 LKSDLEKFEVPDENEEIKRPLVDL-RNPGPPQHQEHETQNPEHHED 375
           L+ D E     D + E+  P       P PP  Q++   +P H+ED
Sbjct: 219 LQPDKES----DLDSELNLPAAPTGHTPAPPNRQQNLVLHPFHNED 260


>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 32/150 (21%), Positives = 71/150 (47%)
 Frame = +1

Query: 79  AEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLE 258
           AE+K + V ++     EL    +++K+++ S   +  + +      +++  K SL S+L+
Sbjct: 424 AEEKEMLVSKHSKCLTELEKAQSSVKELE-STNGDLNDKI-----AVLQNEKNSLSSELQ 477

Query: 259 KFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 438
           + E   EN         L N    Q  E  +   +++ED E + S+++ND+ T +    +
Sbjct: 478 QLEASFEN---------LGND-LEQELERISIMHKNNEDLELVNSNLQNDLATVQGQKNE 527

Query: 439 GFQEVSDGIGKWYARTEQINELQASLQHFQ 528
                 +   K   + +QI+ LQ ++++ +
Sbjct: 528 AVASTLELGNKLEEKNQQISNLQEAVENLE 557


>03_06_0204 +
           32341756-32341843,32341943-32342025,32342690-32342765,
           32342876-32342943,32343001-32343045,32343308-32343392,
           32344270-32344385,32344497-32344580,32345394-32345540,
           32345845-32345956,32346027-32346146,32346338-32346411
          Length = 365

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = +1

Query: 334 HQEHETQNPEHH---EDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQIN 498
           H+  + Q  + H   EDAEK+V SVK  +   E     G  +V    G ++     +N
Sbjct: 152 HEHEDEQKKQEHTFNEDAEKMVKSVKQAMENGEGCRVYGVLDVQRVAGNFHISVHGLN 209


>08_02_0095 - 12285976-12286037,12286111-12287229,12287494-12288604,
            12288695-12288757,12288851-12288913,12289268-12289318,
            12289538-12289617,12290078-12290164,12290349-12290435,
            12290889-12290975,12292106-12292308,12292756-12292922
          Length = 1059

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +1

Query: 82   EDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEK 261
            +D  + +      EQE   Q   I+D D    AN K       + IVE+I  S K  +E+
Sbjct: 954  QDSGIEIANAEQQEQEKDVQEEHIEDPDT---ANTKGRKPKRYRRIVEKIIESSKKKIEE 1010

Query: 262  FEVPDENEEIKRP 300
             E  +EN+   RP
Sbjct: 1011 QEDAEENQNKARP 1023


>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
            21260180-21260461,21261084-21261587,21261973-21261981,
            21262122-21262196,21262375-21262449,21262557-21263494,
            21263577-21263607,21263694-21263979,21264691-21264905,
            21265329-21265437,21265556-21265611,21265730-21265822,
            21266348-21266393,21266496-21267221,21267489-21267550,
            21267738-21268013,21268604-21268735,21268835-21268909
          Length = 1394

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 18/84 (21%), Positives = 43/84 (51%)
 Frame = +1

Query: 40   AARAASIPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVI 219
            A  +A+  D++ +   + ++   + +  +ELI +     + DNS   + + V D      
Sbjct: 1146 AGHSAAAQDELVKEGKEKMSADHSTAPPKELIKEGEENMNTDNSAAVHVEPVADEK---- 1201

Query: 220  VEEIKPSLKSDLEKFEVPDENEEI 291
            +E+ +P  + D E+ E+ +++EE+
Sbjct: 1202 MEDEEPDYEEDPEEVELYEDDEEM 1225


>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
            31227790-31228014,31228097-31228255,31228393-31228551,
            31228855-31229013,31229371-31229490,31229604-31229825
          Length = 1871

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 1/152 (0%)
 Frame = +1

Query: 79   AEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLE 258
            +E K +  ++ +  E    D+A T K  +++   ++K+ ++  +     E++  L     
Sbjct: 1592 SELKYMEEIQTMQVETTEKDEALTTKMQEHANLVHEKDALEQQLL----EVRKELNDAYH 1647

Query: 259  KFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 438
                 +E   ++    D          E E Q   H  + E  VSS+K  +   EI  + 
Sbjct: 1648 TIANQEEQVSVREIKWDAYKKFSEDQLEAEQQ---HVAELEVQVSSLKQQLQETEIHYKH 1704

Query: 439  GFQEVSDGIGKWYARTE-QINELQASLQHFQE 531
              ++VS    +W A  E  ++EL+A  Q+  E
Sbjct: 1705 KEEQVSLREVQWEADQEHSVSELKAQRQYAAE 1736


>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
            34007684-34007851,34007908-34008099,34008164-34008346,
            34008414-34008590,34008667-34012074
          Length = 1748

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 24/100 (24%), Positives = 44/100 (44%)
 Frame = +1

Query: 64   DKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSL 243
            DK+P+  +  ++   N++S    + +A    D D  L   KK+  D+P +V+  E     
Sbjct: 897  DKIPQPLENAISD-SNMTSVFSGVPEAENA-DTDKGLFLAKKDSEDMPKEVVGAEGSQQD 954

Query: 244  KSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPE 363
            +      EV DE+ E+      L  P    H + + + P+
Sbjct: 955  QFTTSTHEVVDEHNEVAEVEPVLAEPN--MHGQCDGEKPD 992


>08_02_0860 + 21970888-21971833,21973400-21974127
          Length = 557

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -2

Query: 170 LLSMSLIVLAWSMSSCSLDKFSTTFKGLSSAS--GTLSGMEAARAASTNIVSNRAAC 6
           LL +S   L+WSMS+ S   +  T  G +++S  GT       R+     +SN+  C
Sbjct: 99  LLDLSSDELSWSMSTTSSSSYQPTNAGAATSSHVGTGDARSDLRSWLGGALSNQDTC 155


>02_02_0233 + 8105765-8107840
          Length = 691

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 361 EHHEDAEKIVSSVKNDINTAEIALRQ--GFQEVSDGIGKWYARTEQ 492
           EH     KI+  ++ D+ +  ++LR     +  +D  G W  R EQ
Sbjct: 426 EHRSSTAKIIGFIRKDLTSGWVSLRSVADHRRFNDRRGHWTLRREQ 471


>02_01_0267 -
           1766071-1766261,1766368-1766569,1766719-1766814,
           1767414-1767560,1767635-1767800,1767907-1767973,
           1772850-1772949,1773029-1773099,1773199-1773382,
           1773784-1773929,1774484-1774663,1774737-1774824,
           1775634-1775838,1775945-1776081,1776529-1776612,
           1776718-1776894,1777050-1777194,1777642-1777763,
           1777846-1778091,1778571-1778789,1779016-1779094,
           1779178-1779257,1779291-1779320
          Length = 1053

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = +1

Query: 70  VPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIK 234
           +  A+ K L++ E  S EQEL    +++ D+   L+AN   + +  +K  +EE+K
Sbjct: 673 ISSADSKTLSL-EAESKEQELNSSKSSLDDLTAMLKANVDAINNFTIK--IEELK 724


>10_08_0520 - 18495118-18498237
          Length = 1039

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 403 NDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASL 516
           +D+N + + LR+G + + D +  W A  E  NE  A L
Sbjct: 476 SDLNKSRV-LRKGLEHIPDSVRLWKAVVELANEEDARL 512


>07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213
          Length = 343

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +1

Query: 37  LAARAASIPDKVPEAEDKPLNVVENLSSEQELIDQANTIK 156
           LA  AA++P  VP+A       +E+ S+  ++++  NT++
Sbjct: 207 LAVAAAAVPAPVPDATSSITGSLESDSAGDDVVEYMNTLQ 246


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,862,404
Number of Sequences: 37544
Number of extensions: 318200
Number of successful extensions: 1256
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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