Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0518
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43693| Best HMM Match : ACBP (HMM E-Value=2.7) 35 0.061
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 35 0.081
SB_52323| Best HMM Match : DUF1388 (HMM E-Value=5.8) 33 0.25
SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_53715| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1) 32 0.43
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_49487| Best HMM Match : Zip (HMM E-Value=0.014) 31 0.76
SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) 31 0.76
SB_38797| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 31 0.76
SB_15610| Best HMM Match : DUF1174 (HMM E-Value=7.8) 31 0.76
SB_1285| Best HMM Match : SET (HMM E-Value=0.011) 31 1.00
SB_15397| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89) 30 1.7
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_35532| Best HMM Match : Peptidase_S49 (HMM E-Value=2.7) 30 2.3
SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30) 29 3.0
SB_2719| Best HMM Match : CUB (HMM E-Value=1.9e-24) 29 3.0
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 4.0
SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 29 4.0
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 5.3
SB_35568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3) 28 7.0
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 28 7.0
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 28 9.3
SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10) 28 9.3
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 28 9.3
SB_4772| Best HMM Match : Peptidase_U61 (HMM E-Value=3.1) 28 9.3
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 28 9.3
SB_38362| Best HMM Match : BRCT (HMM E-Value=0) 28 9.3
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18) 28 9.3
SB_9537| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_6634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_43693| Best HMM Match : ACBP (HMM E-Value=2.7)
Length = 354
Score = 35.1 bits (77), Expect = 0.061
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +1
Query: 223 EEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQE--HETQNPEHHEDAEKIVSS 396
E+ P +K + PD+ K P V R+P P HE E+ + ++ S
Sbjct: 195 EQKSPDVKRSPDVRRTPDDARAHKSPDVPRRSPDVPNRYNGVHEKSPWRDGEERKIVIKS 254
Query: 397 VKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFRRSNTKVE 561
+ D++ ++ L + F +D I R+ + ++ F FR ++V+
Sbjct: 255 EREDVSYEKLNLEEKFNSANDRITS-LMRSGSVGKVLDRRSPFSLRFRPYGSRVK 308
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 34.7 bits (76), Expect = 0.081
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = +1
Query: 70 VPEAEDKPLNVVENLSSEQ--ELIDQANTIKDIDNSL--RANKKEVVDIPVKVIVEEIKP 237
V E PL +N+ +E E++ + + D S KE V +P K ++E
Sbjct: 502 VETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAI 561
Query: 238 SLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVS 393
+++++ F+ + ++K + +NP P HE P++ D ++ S
Sbjct: 562 DSRAEVKSFD----HSKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVAS 609
>SB_52323| Best HMM Match : DUF1388 (HMM E-Value=5.8)
Length = 302
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 223 EEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQE--HETQNPEHHEDAEKIVSS 396
E+ P +K + PD+ K P V R+P P HE E+ + ++ S
Sbjct: 221 EQKSPDVKRSPDVRRTPDDARAHKSPDVPRRSPDVPNRYNGVHEKSPWRDGEERKIVIKS 280
Query: 397 VKNDINTAEIALRQGFQEVSD 459
+ D++ ++ L + F +D
Sbjct: 281 EREDVSYEKLNLEEKFNSAND 301
>SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1951
Score = 32.7 bits (71), Expect = 0.33
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = +1
Query: 196 VDIPVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED 375
+DIPV + E++K DL K E NE+ + D R G + ++N E
Sbjct: 1671 IDIPVDEVTEDVKDEKSPDLRKEEEMKNNEKSLTSIGDDREDGGDEADVTTSRNQE---- 1726
Query: 376 AEKIVSSVKNDINTAEIALRQGFQEVSDG 462
E V S+ + A ++Q ++ DG
Sbjct: 1727 -ESAVDSISS--KEANEKIKQDSRKTGDG 1752
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 32.7 bits (71), Expect = 0.33
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Frame = +1
Query: 64 DKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSL 243
+KV E+ D + +EN EL +Q IK+ + L+ +KE+ + K+I E+ L
Sbjct: 603 EKVNESRDDEITELEN-----ELEEQREIIKENEEKLKEKEKEIEKLKKKII--ELSDKL 655
Query: 244 KS-DLEKFEVPDENEEIKRPLV---DLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDI 411
K + + +V + E ++ + D E++ + +H + +K+++ +K
Sbjct: 656 KDMETSRNKVETKLAEQEKTIACHKDEIKTARDTINEYKEISARNHHERDKMMTRLKELE 715
Query: 412 NTAEIALRQ 438
EI RQ
Sbjct: 716 TQMEILTRQ 724
>SB_53715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 32.3 bits (70), Expect = 0.43
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 64 DKVPE-AEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPS 240
DK PE A D ++V N S + L ++ +N + N E + V ++ S
Sbjct: 41 DKKPEEATDSTQSLVSNSSYQSSLTPKSKMAAAGENIIDLNDDEKTSLRVTAFLDNTLGS 100
Query: 241 LKSDLEKFEVPDENEEIKRPLVDLR 315
SDL K E E+KR ++ R
Sbjct: 101 DVSDLGKVAKLLEESELKRKAIEKR 125
>SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1)
Length = 210
Score = 32.3 bits (70), Expect = 0.43
Identities = 29/115 (25%), Positives = 53/115 (46%)
Frame = +1
Query: 61 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPS 240
P K +AE KP + ++ SS+ + + T K+ S + +K + VK+ + P
Sbjct: 66 PKKKKKAESKPKSAEKSKSSKSKTPAKKETKKESKKSPKKSKP----VTVKITSGKKTPK 121
Query: 241 LKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKN 405
KS + + D+ + PLV PP + + T + +DA+ V +VK+
Sbjct: 122 -KSPKKAHKTVDDLSSDEEPLVKKLKKQPPTNDDLVTVVKDLLKDADLKVVTVKS 175
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 32.3 bits (70), Expect = 0.43
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Frame = +1
Query: 82 EDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEK 261
+D PLN E L +Q + +++++N L + +E ++ + + + K ++S +
Sbjct: 782 DDAPLNT-EQLRYDQGM---KGVVEELENKL-SKLQEKLEQSNQQLAAKSK-RIESLNAE 835
Query: 262 FEVPDENEEIKRPLV-DLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 438
V EN E +R +V +L + Q+H+ + + E A++ +S D + LR
Sbjct: 836 MGVLRENLEDERTVVQNLEDRIGGLIQKHDVEINQLKEKAKEHQASTDEDASAITSKLRH 895
Query: 439 GFQEVSDGIGKWYARTEQINELQASLQHFQENFRR 543
+E K +TE++ ELQ L+ Q+ F R
Sbjct: 896 DLEESLRTNSK---KTEEVLELQEKLELIQQEFHR 927
>SB_49487| Best HMM Match : Zip (HMM E-Value=0.014)
Length = 510
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = +1
Query: 235 PSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDIN 414
P ++D +V ++ I+ LR+ H ++ + HH +KI S
Sbjct: 39 PQKRTDGSGSDVSSGSDSIENEKFTLRDDHTDNHHQNHHDHHHHHHHDKKIDSKTSIATV 98
Query: 415 TAEIALRQGFQEVSDGI 465
+ + GF +SDG+
Sbjct: 99 AWMVIVSDGFHNLSDGL 115
>SB_48596| Best HMM Match : Filament (HMM E-Value=0.23)
Length = 458
Score = 31.5 bits (68), Expect = 0.76
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Frame = +1
Query: 115 SSEQELIDQANTIKDIDNSLRANKKEVVDIPVKV-IVEEIKPSLK---SDL-EKFE-VPD 276
SS ++LID I+D ++S +KE + + +V +E K SL+ SDL EK + V +
Sbjct: 152 SSRRDLIDAHRKIRDAEDSKETLRKENLHVKRQVKDLEMEKQSLEKSVSDLREKVKLVEN 211
Query: 277 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVS 456
E E+K +L + E+ + +ED + V + L++ +++
Sbjct: 212 EKSELKFAFDEL-DSKYRVCDENRSSITNEYEDMRARFNEVDTERQEIRRELKEALRQIK 270
Query: 457 DGIGKWYARTEQINELQASLQHFQENFRRSNTKVE*NA 570
G+ + +L+ L+ QE RR +++ E NA
Sbjct: 271 MLSGECLQGKKDATDLKDRLE--QEEGRRLDSRQEMNA 306
>SB_38797| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 308
Score = 31.5 bits (68), Expect = 0.76
Identities = 25/103 (24%), Positives = 51/103 (49%)
Frame = +1
Query: 100 VVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPDE 279
VVE+ SE+E ++ + + ++++EVV +V+ E P +++ E P+E
Sbjct: 47 VVESKPSEEE-----TSVPSVVVNGDSHQEEVVQSSAEVVAESAPPPAQTETEDTTTPEE 101
Query: 280 NEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKND 408
+E+ ++D ++ P + E ET PE E + V ++
Sbjct: 102 VKELSN-VLDEQDTKPEEPAEAETA-PEAVESVPEPAHEVVSE 142
>SB_15610| Best HMM Match : DUF1174 (HMM E-Value=7.8)
Length = 200
Score = 31.5 bits (68), Expect = 0.76
Identities = 25/103 (24%), Positives = 51/103 (49%)
Frame = +1
Query: 100 VVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPDE 279
VVE+ SE+E ++ + + ++++EVV +V+ E P +++ E P+E
Sbjct: 47 VVESKPSEEE-----TSVPSVVVNGDSHQEEVVQSSAEVVAESAPPPAQTETEDTTTPEE 101
Query: 280 NEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKND 408
+E+ ++D ++ P + E ET PE E + V ++
Sbjct: 102 VKELSN-VLDEQDTKPEEPAEAETA-PEAVESVPEPAHEVVSE 142
>SB_1285| Best HMM Match : SET (HMM E-Value=0.011)
Length = 829
Score = 31.1 bits (67), Expect = 1.00
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 256 EKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE-KIVSSVKNDI 411
+K+ V + EE+ R LV L GPP + T+ P E ++S VK ++
Sbjct: 554 KKYSVAEFREELVRQLVGLEEFGPPPAHKPPTRAPNQFETVHMPMMSDVKRNL 606
>SB_15397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Frame = +1
Query: 100 VVENLSSEQELIDQANTIKD-IDNSLRANKK--EVVDIPVKVIVEEI---KPSL-KSDLE 258
+V++L + + +++ D + N R +K E +D+ K ++E KP+ K L+
Sbjct: 96 MVKSLEDKDQFMEEERLFSDKLYNLQRTKEKLEEQIDLANKALMEATPKKKPNFFKKVLQ 155
Query: 259 KFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDA 378
K + + ++ K P+ LR+ P + T +HH+D+
Sbjct: 156 KAGIK-KKKDAKNPVHLLRHEQLPDDVDSSTMGCDHHDDS 194
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Frame = +1
Query: 100 VVENLSSEQELIDQANTIKD-IDNSLRANKK--EVVDIPVKVIVEEI---KPSL-KSDLE 258
+V++L + + +++ D + N R +K E +D+ K ++E KP+ K L+
Sbjct: 315 MVKSLEDKDQFMEEERLFSDKLYNLQRTKEKLEEQIDLANKALMEATPKKKPNFFKKVLQ 374
Query: 259 KFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDA 378
K + + ++ K P+ LR+ P + T +HH+D+
Sbjct: 375 KAGIK-KKKDAKNPVHLLRHEQLPDDVDSSTMGCDHHDDS 413
>SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 256 EKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE-KIVSSVKND 408
+K+ V + EE+ R LV L GPP + T+ P E ++S VK +
Sbjct: 554 KKYSVAEFREELVRQLVGLEEFGPPPAHKPPTRAPNQFETVHMPMMSDVKRN 605
>SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89)
Length = 589
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = +1
Query: 235 PSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDIN 414
P +S+ ++ P + ++R P P H+ ++ + D+E+ SSV ND
Sbjct: 426 PVQRSNSQRSSSPTKEVTVQRSSSQRGPPSPSAHKSLQSSHQVQRSDSERAFSSVLNDPQ 485
Query: 415 TAEI 426
++
Sbjct: 486 AGDV 489
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = +1
Query: 235 PSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDIN 414
P +S+ ++ P + ++R P P H+ ++ + D+E+ SSV ND
Sbjct: 3532 PVQRSNSQRSSSPTKEVTVQRSSSQRGPPSPSAHKSLQSSHQVQRSDSERAFSSVLNDPQ 3591
Query: 415 TAEI 426
++
Sbjct: 3592 AGDV 3595
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 319 PGPPQHQEHETQNPEHHEDAEKIVSSVKN---DINTAEIALRQGFQEVSDGIGKWYARTE 489
P PP H + E H E E+I S K+ D+ A+ L++ +++ + +G Y R
Sbjct: 282 PNPPPHLDEEKIKQLHEELKEEIKSMAKDSEKDLEDAKKDLKEEIEQIKEEVG--YLRYM 339
Query: 490 QINEL 504
+ +L
Sbjct: 340 EAKQL 344
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/141 (17%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Frame = +1
Query: 112 LSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKF-EVPDENEE 288
L E+ + + KD++N++ A + E + K + EE++ +K + E E+ D N+
Sbjct: 947 LQCEEHKMQISTLQKDLENNVSAEEMEALRKAAKEVEEELQ-RVKEERESMQELKDTNDF 1005
Query: 289 IKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIG 468
K + + E E H+E+ S ++ + +L +V +
Sbjct: 1006 EKEEVKSALELANARITELEKHLESHYEELNHSRSEKNTELESLRTSLEASEGKVKELRL 1065
Query: 469 KWYARTEQINELQASLQHFQE 531
+ A+ +L+ + +++
Sbjct: 1066 QLVAKDSDFEKLKVQVGEYED 1086
>SB_35532| Best HMM Match : Peptidase_S49 (HMM E-Value=2.7)
Length = 149
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 55 SIPDKVPEAEDKPLNVVENLSSEQELIDQ-ANTIKDIDNSLRANKKEVVDIPVKVIVEEI 231
SIP P+ + K LN VEN++ +E ++ A+ + D+ N + + K E V V+ +
Sbjct: 74 SIPLAKPQKQQKVLNAVENINWPEEKKERFADVLNDVHN-ISSEKSEEEGDGVVFFVKSL 132
Query: 232 K 234
K
Sbjct: 133 K 133
>SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30)
Length = 796
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +1
Query: 205 PVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEK 384
P+ V + I S+ S+ + E + + K ++ + PP+ + TQ+PE
Sbjct: 465 PMSVGICRITESMSSNQAEKETSGLDPKFKA--LEQQQSNPPRKHKFHTQDPEKTPAKRV 522
Query: 385 IVSSVKNDINTAEIALRQGFQE 450
S+ KN+ A + QG +E
Sbjct: 523 CTSNEKNNSAAASLVSTQGNKE 544
>SB_2719| Best HMM Match : CUB (HMM E-Value=1.9e-24)
Length = 614
Score = 29.5 bits (63), Expect = 3.0
Identities = 30/127 (23%), Positives = 54/127 (42%)
Frame = +1
Query: 40 AARAASIPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVI 219
AA A++ D+ + K + +S + + +Q K+ + E + PVK
Sbjct: 382 AAAVAALRDQGGTPDSKRSS--NRISYCERIAEQQEDEKEEGEQTALLEPEKIPPPVKPK 439
Query: 220 VEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSV 399
+ KP+ K D V EN +P ++ QH+ HE + P H + E ++ V
Sbjct: 440 PKRQKPAPKPD-----VTSENTSANKP--EVTTEPEVQHKAHEHETPVH--EPEVTIAEV 490
Query: 400 KNDINTA 420
+D + A
Sbjct: 491 HHDESEA 497
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.1 bits (62), Expect = 4.0
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Frame = +1
Query: 97 NVVENLSSEQELI-DQANTIKDIDNSLRANKKE----VVDIPVKVIVEEIKPSLKSDLEK 261
N +L+ + +I DQ + D+DN + K++ ++D I +S++E
Sbjct: 2595 NYRTDLADKDRIIRDQKSRQVDMDNEINKLKRDLNNQIIDSEGHFKELVIANKERSEME- 2653
Query: 262 FEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAE------ 423
+ + ++KR L + + E E N EH ED +I ++KN I+ E
Sbjct: 2654 MAIGNLRGQLKRELSNKNSECDGYITEIERLNQEHSEDQMEI-ETLKNKISKLERLLADT 2712
Query: 424 -----IALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFRRSNTKVE 561
+A+ Q S G + EQI E+Q ++ F+ T +E
Sbjct: 2713 RHEHEVAVVQAEDLKSMGESEASVLNEQITEIQTRVEEFRLEVIEKETIIE 2763
>SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 244 KSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQ--EHETQNPEHHEDAEKIVSSVKNDINT 417
K D+ K E+ N + K LR + +TQ + EK + +KN++
Sbjct: 276 KMDVAKSELEIYNSQHKNAQTQLREAHANLESVIQKQTQRKSEIKSIEKELPDLKNNLKK 335
Query: 418 AEIALRQGFQEVSDGIGKWYARTEQINELQASLQ 519
AE L + Q + + + ++ E ++SLQ
Sbjct: 336 AEADLEKAVQGEAKSSQELRSIRSKVEEARSSLQ 369
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +1
Query: 64 DKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKP-- 237
+K + +KP V E +EQE D+ +D + KE D E+ KP
Sbjct: 797 EKTDQELEKPDMVQEKQDNEQEKPDKGEEKQDQEQGKPDKNKEKQD------REQEKPDK 850
Query: 238 SLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE 381
L+ +K E PD+ +E K+ + + Q+ E + P+ ++ +
Sbjct: 851 DLEKQYQKQEKPDKGQE-KQDREQEKPDKDQEKQDREQEKPDKDQEKQ 897
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.7 bits (61), Expect = 5.3
Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 2/149 (1%)
Frame = +1
Query: 121 EQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLE--KFEVPDENEEIK 294
+QEL N + +++ R ++E VD+ K V + ++ DLE K E + IK
Sbjct: 1218 KQELQSYKNRYEKLESDYRKLQQENVDLRAK--VNALNKRIR-DLEAAKDRAEKEKQAIK 1274
Query: 295 RPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKW 474
LV N EH+T ++ +++ D N R+ + I +
Sbjct: 1275 EELVQANNDLADLEIEHDTVQKDYDSLKKQLA-----DANERLAKAREENMNLQQQIVEL 1329
Query: 475 YARTEQINELQASLQHFQENFRRSNTKVE 561
R E A + +N + S +E
Sbjct: 1330 KMRLESEERESAEKDNLTDNLQASKEYIE 1358
>SB_35568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 380 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRPACNISKKIFGAQIQKL 559
++ + ++T + K +K S + N LVP K RP N+ K + +QK+
Sbjct: 482 EEKLIDEEITKLKSKGAIIKVSPCTGEFISNIFLVPKKTADMRPVINL--KPLNSLVQKI 539
Query: 560 NETLHFIKPA-DTIA 601
+ + I A D IA
Sbjct: 540 HFKMENINVALDAIA 554
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +1
Query: 271 PDENEEIKRPLVDLRNPGPPQHQEHETQN---PEHHEDAEKI--VSSVKNDINTAEIALR 435
PDE E + + DL NP + E E Q+ + +D EKI V S N + I L
Sbjct: 831 PDEREIVLSEIYDLDNPSDDEELETEIQDALETANEQDKEKILAVYSALRSPNLSGIELA 890
Query: 436 Q 438
Q
Sbjct: 891 Q 891
>SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 217 IVEEIKPSLKSDLEKFEVPDENEEIKRP---LVDLRNPGPPQHQEHETQNPEHHED 375
+ +I P+ L +PDE+ E RP L DL + PP E + +HED
Sbjct: 172 VTAKITPAASVRLVNTRMPDESPEPTRPPPPLDDLDDLPPPPPPPPEDDSIHNHED 227
>SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3)
Length = 1168
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/83 (24%), Positives = 38/83 (45%)
Frame = +1
Query: 181 NKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNP 360
N K+ KV++E+++ ++SD E E + E +PL P ++ ET
Sbjct: 604 NAKDEFSPEAKVVIEQLRLQIESDKEVIEDLKQELEGTQPL--------PSGEDEETDEV 655
Query: 361 EHHEDAEKIVSSVKNDINTAEIA 429
+ E+ +SS++ + E A
Sbjct: 656 DVLEEQRHRISSLEGHLKLVEKA 678
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 28.3 bits (60), Expect = 7.0
Identities = 23/124 (18%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Frame = +1
Query: 82 EDKPLNVVENLSSEQE--LIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDL 255
+++ L +V+ E++ L D+ + ++ ++++ KEV+ + K +E++ + + +
Sbjct: 1567 QEQKLQLVQEFEREKDDILSDKQQEKQSLEATIQSLLKEVIKL--KQQRKEMRQNHRQEA 1624
Query: 256 EKFE--VPDENEEIKRPLVDL-RNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEI 426
+ E + E E IK + R +HE + E+I+ +++ +++ AE+
Sbjct: 1625 QGIEELLEKEREGIKDNMDKYKRELFEKMKNDHEQDLTSERKKYEEIIEALQGELSKAEV 1684
Query: 427 ALRQ 438
L++
Sbjct: 1685 RLKE 1688
>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4247
Score = 27.9 bits (59), Expect = 9.3
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
Frame = +1
Query: 67 KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLK 246
+ P AED V+ LS L D N I+ + + V+D+ +E++K LK
Sbjct: 104 QAPVAEDSESPVLLELS----LSDAKNLYSGIEVCIPSAVPPVLDV-----MEKLKQQLK 154
Query: 247 SDLEKFEVPDENEEIKRPLVDLRNPGP-PQHQEHETQNPEHHEDAEKIVSSVKNDINTAE 423
S+LEK++ ++ K P P QH +D++K + I+ A
Sbjct: 155 SELEKYQSSAQHLPQKTKEDFPVKPLPVKQHGAPSDATSASSDDSDKTTKWITCKISLAA 214
Query: 424 IALRQGFQEVSDGIGKWY 477
AL F + + K Y
Sbjct: 215 GALLCAFDGMVVHLHKSY 232
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Frame = +1
Query: 76 EAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDL 255
+AE+KP + E+E+ + + +++ S K+ + +EE++ + + D
Sbjct: 101 QAEEKPKESEQPDKPEEEVQKEEDKDGEVEKSEEKPKEAKAETEESGKIEEVETTTEQDK 160
Query: 256 EKFEV-----PDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDA 378
+ EV + N E + PL+ + H++ ET+ E E A
Sbjct: 161 QPEEVVKNSEEEGNHEDQEPLLSFED----THEDPETKPVEGEEPA 202
>SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10)
Length = 624
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 530 SWKCCKLAWSSLICSVRAYHFPIPSDTSWK 441
SW+ + W S++ S +++ + SD SW+
Sbjct: 107 SWQSMVVQWQSMVVSDKSWQSMVVSDKSWQ 136
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 100 VVENLSSEQELIDQANTIKDIDNSLRANKKEVVD 201
V E + S++E+ D N +KD+ +S+ KK+ D
Sbjct: 302 VKEAMPSKKEIPDMRNNLKDLKSSINEVKKQTDD 335
>SB_4772| Best HMM Match : Peptidase_U61 (HMM E-Value=3.1)
Length = 363
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +1
Query: 382 KIVSSVKNDINTAEIALRQGFQEVSDGIGKW----YARTEQINELQASLQHFQEN 534
K S N+ + ++ GF +V G G W Y E +N Q +L F+++
Sbjct: 43 KFTGSCTNESDVGQMRFDNGFLQVCTGTGGWRSMQYQGCEPLNVAQRNLDAFKKS 97
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 27.9 bits (59), Expect = 9.3
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +1
Query: 277 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVS 456
ENE+I+ V LR+ Q +E + E+ D E+ + S+K + AE + + ++
Sbjct: 259 ENEKIRLEHV-LRDR-ERQLKEKDRIIEENKADYEEDLKSLKELLRKAEEKSKSKMKAIN 316
Query: 457 DG----IGKWYARTEQINELQASLQHFQENFRR 543
D + + +EQI+ L+A+LQH QE R
Sbjct: 317 DYEIQILDFKSSFSEQISTLEAALQHEQEQKTR 349
>SB_38362| Best HMM Match : BRCT (HMM E-Value=0)
Length = 1572
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +1
Query: 154 KDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPD-ENEEIKRPLVDL---RNP 321
KD++ L+ ++ + + V I+E K K E + PD +NEE L R P
Sbjct: 425 KDVE-LLKGSELQPHVVTVDWIIESAKSGRKLPEEDYTHPDFQNEETDDSFPSLKENREP 483
Query: 322 GPPQHQEHETQNPEHHEDAEKIVSSVKNDIN 414
G + P+ A+K + + D+N
Sbjct: 484 GADGKGKRSKTQPDETTKADKTANKSEFDVN 514
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 27.9 bits (59), Expect = 9.3
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Frame = +1
Query: 73 PEA-EDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKS 249
PE+ E+KP + N ++E+ + K + + + ++ VEE KP KS
Sbjct: 469 PESFEEKPKHA-RNKEKKKEVKKKKGKEKSTTSGTSKKSEAEIQEKKEIKVEEAKPVAKS 527
Query: 250 DLEKFEVPD-ENEEIKRPL-VDLRNPGPPQHQEHE-----TQNPEHHEDAEKIVSSVKND 408
D + V D E E+ + L D +N E E + E+ +D + + K D
Sbjct: 528 DKPQESVKDIERSEVYQKLATDYKNTEKALLIEQEKLSEMEKELENSKDEKVKIEQEKAD 587
Query: 409 INTAEIALRQG----FQEVSDGIGKWYARTEQI-NELQASLQHFQENFRRSNTKVE 561
++ A L++ +E+ D I +++ E++ + + Q +R N E
Sbjct: 588 LDIAIENLKRNQEIELEELKDNIEDLERENKKLKGEIECNDEMIQYQEKRINQYAE 643
>SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18)
Length = 1051
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/97 (23%), Positives = 46/97 (47%)
Frame = +1
Query: 271 PDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQE 450
P + +I++ + +++EH + E DAEK ++ +K T E LR +E
Sbjct: 147 PTRSNQIRQQGSNFETKLSRENEEHLIELKEKLHDAEKEIAQLK----TIEPMLR---KE 199
Query: 451 VSDGIGKWYARTEQINELQASLQHFQENFRRSNTKVE 561
+ D + + +Q +EL+ ++ Q+ N K+E
Sbjct: 200 LDDCLEEKRHLVQQRDELENTVNKKQDEIEALNAKLE 236
>SB_9537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +1
Query: 88 KPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFE 267
KP N++ S Q + I +ANK++ D+ V+ E IK K D KFE
Sbjct: 108 KPYNILSRPGSAQPKNFTKENVNHIKKIQKANKEKQKDL--SVVGEPIKAVYKPD--KFE 163
Query: 268 VPDEN--EEIKRPLVDLRNPGPPQHQEHETQNP 360
+ +E+K P R+ + H P
Sbjct: 164 HVESKVAKEVKAPPPPPRSNSATYLRAHSRNGP 196
>SB_6634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 256 EKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE-KIVSSVKND 408
+K+ V + EE+ R L+ L GPP + T+ P E ++S VK +
Sbjct: 59 KKYLVAEFREELVRQLLGLEEFGPPPAHKPPTKAPNQFETVHMPMMSDVKRN 110
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,313,258
Number of Sequences: 59808
Number of extensions: 365770
Number of successful extensions: 1457
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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