Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0518
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   1.1  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    26   1.1  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    26   1.4  
AY341156-1|AAR13720.1|   98|Anopheles gambiae BolA protein.            24   5.8  
AY341155-1|AAR13719.1|   98|Anopheles gambiae BolA protein.            24   5.8  
AY341154-1|AAR13718.1|   98|Anopheles gambiae BolA protein.            24   5.8  
AY341153-1|AAR13717.1|   98|Anopheles gambiae BolA protein.            24   5.8  
AY341152-1|AAR13716.1|   98|Anopheles gambiae BolA protein.            24   5.8  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   7.6  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 292  KRPLVDLRNPGPPQHQEHET--QNPEHHEDAEKIVSSVKNDI 411
            KR  + L++   P   ++ T    P+HH++   ++  +KN +
Sbjct: 1603 KRDRIILQDESEPNTSQYSTFIHEPKHHQEDPPVLKYIKNQV 1644


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 417 CVNVIFDGRNDFFSIFVVFRILCFVLLMLRGP 322
           C   +F+G++    IF+V  ++C   L+L  P
Sbjct: 619 CKEFMFEGQDTLQVIFIVLGLICIPWLLLAKP 650


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 417 CVNVIFDGRNDFFSIFVVFRILCFVLLMLRGP 322
           C   +F+G+N+    FV   +LC   ++L  P
Sbjct: 630 CDEFMFEGQNELQRTFVFIALLCIPWMLLGKP 661


>AY341156-1|AAR13720.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 728 PQFEXLQIADXDRLLKFVSKDLRPDSIVSKRSFILRFPRQ 609
           PQFE L +    RL+  + K       V   S + + P+Q
Sbjct: 40  PQFEGLPLIKRHRLVNEIVKSQLAGDFVHALSIVAKTPQQ 79


>AY341155-1|AAR13719.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 728 PQFEXLQIADXDRLLKFVSKDLRPDSIVSKRSFILRFPRQ 609
           PQFE L +    RL+  + K       V   S + + P+Q
Sbjct: 40  PQFEGLPLIKRHRLVNEIVKSQLAGDFVHALSIVAKTPQQ 79


>AY341154-1|AAR13718.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 728 PQFEXLQIADXDRLLKFVSKDLRPDSIVSKRSFILRFPRQ 609
           PQFE L +    RL+  + K       V   S + + P+Q
Sbjct: 40  PQFEGLPLIKRHRLVNEIVKSQLAGDFVHALSIVAKTPQQ 79


>AY341153-1|AAR13717.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 728 PQFEXLQIADXDRLLKFVSKDLRPDSIVSKRSFILRFPRQ 609
           PQFE L +    RL+  + K       V   S + + P+Q
Sbjct: 40  PQFEGLPLIKRHRLVNEIVKSQLAGDFVHALSIVAKTPQQ 79


>AY341152-1|AAR13716.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 728 PQFEXLQIADXDRLLKFVSKDLRPDSIVSKRSFILRFPRQ 609
           PQFE L +    RL+  + K       V   S + + P+Q
Sbjct: 40  PQFEGLPLIKRHRLVNEIVKSQLAGDFVHALSIVAKTPQQ 79


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +1

Query: 292 KRPLVDLRNPGPP--QHQEHETQNPEHHEDAEKIVSSVKNDINTAEI 426
           +RP+ D + PGP   Q  + + Q P       + V ++ +  N   I
Sbjct: 47  RRPVADDQQPGPSGLQRLQQQQQQPSRLTPVREAVENIPSPRNGPNI 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,012
Number of Sequences: 2352
Number of extensions: 13011
Number of successful extensions: 47
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)