Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0516
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...   206   4e-55
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...   206   4e-55
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...   206   4e-55
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   1.8  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.6  

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score =  206 bits (504), Expect = 4e-55
 Identities = 98/115 (85%), Positives = 103/115 (89%)
 Frame = +3

Query: 177 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 356
           M+  ADP  FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ  SKQIA D++YKGIVD F
Sbjct: 1   MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60

Query: 357 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYF 521
           VRIPKEQG+ +FWRGN ANVIRYFPTQALNFAFKD YKQVFLGGVDK TQFWRYF
Sbjct: 61  VRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWRYF 115



 Score = 75.4 bits (177), Expect = 2e-15
 Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
 Frame = +1

Query: 559 TSLCFVYPLDFARTRLAADVGKGDGQREFXGLGNCISKIFKXRRSDRSVQRFSG--VSVQ 732
           TSLCFVYPLDFARTRL ADVG G G+REF GL +C+ K  K   SD  +  + G  VSVQ
Sbjct: 128 TSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVK---SDGIIGLYRGFNVSVQ 184

Query: 733 GIII 744
           GIII
Sbjct: 185 GIII 188



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 22/69 (31%), Positives = 39/69 (56%)
 Frame = +3

Query: 264 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 443
           P + V+  + +Q  S    ++  YK  +D +V+I K++G  +F++G F+NV+R     AL
Sbjct: 232 PFDTVRRRMMMQ--SWPCKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR-GTGGAL 288

Query: 444 NFAFKDKYK 470
              F D+ K
Sbjct: 289 VLVFYDEVK 297


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score =  206 bits (504), Expect = 4e-55
 Identities = 98/115 (85%), Positives = 103/115 (89%)
 Frame = +3

Query: 177 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 356
           M+  ADP  FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ  SKQIA D++YKGIVD F
Sbjct: 1   MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60

Query: 357 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYF 521
           VRIPKEQG+ +FWRGN ANVIRYFPTQALNFAFKD YKQVFLGGVDK TQFWRYF
Sbjct: 61  VRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWRYF 115



 Score = 75.4 bits (177), Expect = 2e-15
 Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
 Frame = +1

Query: 559 TSLCFVYPLDFARTRLAADVGKGDGQREFXGLGNCISKIFKXRRSDRSVQRFSG--VSVQ 732
           TSLCFVYPLDFARTRL ADVG G G+REF GL +C+ K  K   SD  +  + G  VSVQ
Sbjct: 128 TSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVK---SDGIIGLYRGFNVSVQ 184

Query: 733 GIII 744
           GIII
Sbjct: 185 GIII 188



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 22/69 (31%), Positives = 39/69 (56%)
 Frame = +3

Query: 264 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 443
           P + V+  + +Q  S    ++  YK  +D +V+I K++G  +F++G F+NV+R     AL
Sbjct: 232 PFDTVRRRMMMQ--SWPCKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR-GTGGAL 288

Query: 444 NFAFKDKYK 470
              F D+ K
Sbjct: 289 VLVFYDEVK 297


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score =  206 bits (504), Expect = 4e-55
 Identities = 98/115 (85%), Positives = 103/115 (89%)
 Frame = +3

Query: 177 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 356
           M+  ADP  FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ  SKQIA D++YKGIVD F
Sbjct: 1   MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60

Query: 357 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYF 521
           VRIPKEQG+ +FWRGN ANVIRYFPTQALNFAFKD YKQVFLGGVDK TQFWRYF
Sbjct: 61  VRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWRYF 115



 Score = 76.6 bits (180), Expect = 8e-16
 Identities = 41/64 (64%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
 Frame = +1

Query: 559 TSLCFVYPLDFARTRLAADVGKGDGQREFXGLGNCISKIFKXRRSDRSVQRFSG--VSVQ 732
           TSLCFVYPLDFARTRL ADVG+G G+REF GL +C+ K  K   SD  +  + G  VSVQ
Sbjct: 128 TSLCFVYPLDFARTRLGADVGRGAGEREFNGLLDCLKKTVK---SDGIIGLYRGFNVSVQ 184

Query: 733 GIII 744
           GIII
Sbjct: 185 GIII 188



 Score = 36.7 bits (81), Expect = 8e-04
 Identities = 22/69 (31%), Positives = 40/69 (57%)
 Frame = +3

Query: 264 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 443
           P + V+  + +Q  S +  ++  YK  +D +V+I K++G  +F++G F+NV+R     AL
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR-GTGGAL 288

Query: 444 NFAFKDKYK 470
              F D+ K
Sbjct: 289 VLVFYDEVK 297


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 22.6 bits (46), Expect(2) = 1.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 351 RRRYPCNAGRR 319
           RRRYP NAG +
Sbjct: 346 RRRYPTNAGHK 356



 Score = 21.0 bits (42), Expect(2) = 1.8
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 408 RSYHARMKGDPAPWGCGRRRRRYP 337
           R    R++  P P    R RRR P
Sbjct: 315 REAAGRLRTGPVPGAAERHRRRRP 338


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 572 SCTPLTSHVPVLPP 613
           SC  L  H+P LPP
Sbjct: 376 SCNSLGDHIPPLPP 389


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,854
Number of Sequences: 2352
Number of extensions: 15431
Number of successful extensions: 61
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)