Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0516
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 214 9e-58
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 214 9e-58
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 9.3
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 214 bits (522), Expect = 9e-58
Identities = 98/115 (85%), Positives = 107/115 (93%)
Frame = +3
Query: 177 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 356
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 357 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYF 521
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF RYF
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYF 115
Score = 89.8 bits (213), Expect = 2e-20
Identities = 45/62 (72%), Positives = 49/62 (79%)
Frame = +1
Query: 559 TSLCFVYPLDFARTRLAADVGKGDGQREFXGLGNCISKIFKXRRSDRSVQRFSGVSVQGI 738
TSLCFVYPLDFARTRLAADVGK G+REF GLGNC++KIFK + R GVSVQGI
Sbjct: 128 TSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFK-ADGITGLYRGFGVSVQGI 186
Query: 739 II 744
II
Sbjct: 187 II 188
Score = 28.7 bits (61), Expect = 0.062
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +3
Query: 204 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 383
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 384 LSFWRGNFANVIRYFPTQALNFAFKD 461
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.14
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +3
Query: 264 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 422
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +1
Query: 577 YPLDFARTRLAADVGKGDGQREFXGLGNCISKIFK 681
YP D R R+ G+ + + +C + I+K
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYK 265
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 214 bits (522), Expect = 9e-58
Identities = 98/115 (85%), Positives = 107/115 (93%)
Frame = +3
Query: 177 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 356
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 357 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYF 521
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF RYF
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYF 115
Score = 89.8 bits (213), Expect = 2e-20
Identities = 45/62 (72%), Positives = 49/62 (79%)
Frame = +1
Query: 559 TSLCFVYPLDFARTRLAADVGKGDGQREFXGLGNCISKIFKXRRSDRSVQRFSGVSVQGI 738
TSLCFVYPLDFARTRLAADVGK G+REF GLGNC++KIFK + R GVSVQGI
Sbjct: 128 TSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFK-ADGITGLYRGFGVSVQGI 186
Query: 739 II 744
II
Sbjct: 187 II 188
Score = 28.7 bits (61), Expect = 0.062
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +3
Query: 204 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 383
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 384 LSFWRGNFANVIRYFPTQALNFAFKD 461
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.14
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +3
Query: 264 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 422
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +1
Query: 577 YPLDFARTRLAADVGKGDGQREFXGLGNCISKIFK 681
YP D R R+ G+ + + +C + I+K
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYK 265
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/30 (30%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 480 LGGVDKKTQFWRYFRW*SGLRWCR-RSHLS 566
LG ++ + FW+ + W G+ C+ R+++S
Sbjct: 92 LGLPNELSLFWQQYPWVLGVSLCKIRAYVS 121
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,244
Number of Sequences: 438
Number of extensions: 4143
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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