Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0515
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006C02C2 Cluster: PREDICTED: hypothetical protein;...    36   1.3  
UniRef50_UPI0000E4657D Cluster: PREDICTED: similar to mKIAA0297 ...    35   2.2  
UniRef50_UPI0001509F2A Cluster: Protein kinase domain containing...    34   2.9  
UniRef50_UPI0000382DE1 Cluster: hypothetical protein Magn0300313...    34   3.9  
UniRef50_Q0RZB8 Cluster: Probable 6-aminopenicillanic-acid-acylt...    33   5.1  
UniRef50_Q23EC2 Cluster: Cyclin, N-terminal domain containing pr...    33   5.1  
UniRef50_P64428 Cluster: Uncharacterized lipoprotein yddW precur...    33   5.1  
UniRef50_Q01MA5 Cluster: OSIGBa0115D20.3 protein; n=9; Oryza sat...    33   8.9  
UniRef50_Q8IJW2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  

>UniRef50_UPI00006C02C2 Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 320

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 38/127 (29%), Positives = 50/127 (39%), Gaps = 8/127 (6%)
 Frame = +3

Query: 9   HQFRLHQVTERRRGPASLTADGAPGNDPPASRIDR-QLYQNEPQTSPNGIQMQTTE---- 173
           HQ   H+ T R RGPA   A G     P A R+ + Q  +  P + P     +       
Sbjct: 149 HQRSAHK-TSRSRGPAEPPAPGGMEGRPEAPRLAKTQRLEPAPFSEPGSAPRRRVSPPHC 207

Query: 174 -ARDL*PRWWIATSRECQGRGRE-RTLTGTQHGS-KRDRTITTQTWRLRTSTRARLHTEV 344
             R L PR      R C G+GR   TL+  + G     RTI T+  + RT          
Sbjct: 208 LVRTLHPRAGCCPER-C-GKGRNTHTLSAKERGGVSHARTIPTEVAKERTERAEEEQAAR 265

Query: 345 VEAVPGR 365
            E +P R
Sbjct: 266 AEEIPRR 272


>UniRef50_UPI0000E4657D Cluster: PREDICTED: similar to mKIAA0297
            protein; n=1; Strongylocentrotus purpuratus|Rep:
            PREDICTED: similar to mKIAA0297 protein -
            Strongylocentrotus purpuratus
          Length = 1666

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 146  ERNSNANDRGERSVTALVDSYQQRMSGSW 232
            E  S  +D GE   T+L DS QQ+++GSW
Sbjct: 1044 ETESQESDEGEEGETSLPDSIQQKLAGSW 1072


>UniRef50_UPI0001509F2A Cluster: Protein kinase domain containing
           protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
           kinase domain containing protein - Tetrahymena
           thermophila SB210
          Length = 941

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 152 NSNANDRGERSVTALVDSYQQRMSGSWQGKDANRNTTWQQERQNNNYTN 298
           N+N N         + D Y+ R    W  +D NRN     +RQNNNY++
Sbjct: 211 NNNNNSNSNYKKENVEDYYKNRDYKDWNNRDGNRN-----DRQNNNYSS 254


>UniRef50_UPI0000382DE1 Cluster: hypothetical protein Magn03003130;
           n=1; Magnetospirillum magnetotacticum MS-1|Rep:
           hypothetical protein Magn03003130 - Magnetospirillum
           magnetotacticum MS-1
          Length = 178

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 45  RGPASLTADGAPGNDPPASRIDRQLYQNEPQTSP 146
           RGP S      PG  PP +  DR L +++P+ SP
Sbjct: 141 RGPGSAVGPRVPGEYPPRASKDRNLRKSQPKASP 174


>UniRef50_Q0RZB8 Cluster: Probable
           6-aminopenicillanic-acid-acyltransferase; n=1;
           Rhodococcus sp. RHA1|Rep: Probable
           6-aminopenicillanic-acid-acyltransferase - Rhodococcus
           sp. (strain RHA1)
          Length = 358

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
 Frame = +3

Query: 216 ECQGRGRERTLTGTQHGSK-RDRT-ITTQTWRLRTSTRARLH---TEVVEAVPGRRPWLV 380
           EC G GRER   G  HG + RD        WR  TSTR+R H   T ++ AV    P L 
Sbjct: 5   ECTGNGRER---GRAHGEQARDLVHAALDRWREGTSTRSRRHLASTGLLAAVEAAVPDLA 61

Query: 381 AE 386
            E
Sbjct: 62  EE 63


>UniRef50_Q23EC2 Cluster: Cyclin, N-terminal domain containing
           protein; n=3; Eukaryota|Rep: Cyclin, N-terminal domain
           containing protein - Tetrahymena thermophila SB210
          Length = 2106

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +2

Query: 137 NLPERNSNANDRGERSVTALVDSYQQRMSGSWQGKDANRNTTWQQERQNNNYTNVET 307
           N+    S  N++ +     ++   Q   S   Q + AN  + +Q +RQNNNY  +++
Sbjct: 685 NMDSSFSRQNNQLKVDTNVIIQQQQDFSSYRLQDQKANNQSFYQDQRQNNNYEQIQS 741


>UniRef50_P64428 Cluster: Uncharacterized lipoprotein yddW
           precursor; n=31; Enterobacteriaceae|Rep: Uncharacterized
           lipoprotein yddW precursor - Shigella flexneri
          Length = 439

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = -3

Query: 278 VSLAAMLCSC*RPFPATTLTFSAGSYPPARSQIS 177
           V+LA +LCSC    P + +T  AGS PPA +Q S
Sbjct: 19  VALALLLCSCKSTPPESMVTPPAGSKPPATTQQS 52


>UniRef50_Q01MA5 Cluster: OSIGBa0115D20.3 protein; n=9; Oryza
           sativa|Rep: OSIGBa0115D20.3 protein - Oryza sativa
           (Rice)
          Length = 653

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 275 SLAAMLCSC*RPFPATTLTFSAGSYPPARS 186
           S+A  LC C +PF   T  FS  +YP A+S
Sbjct: 337 SMAIALCKCLKPFHEATELFSGTTYPTAKS 366


>UniRef50_Q8IJW2 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 3853

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 137  NLPERNSNANDRGERSVTALVDSYQQRMSGSWQGKDANRNTTWQQERQNNNYTNVET 307
            N    N N ND    +    +D  + + + S Q    N N+T   + QNNNYTN  +
Sbjct: 3018 NNDNNNDNNNDNTINNNDLKIDDKENKTNIS-QENITNNNSTTNNKTQNNNYTNASS 3073


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,634,548
Number of Sequences: 1657284
Number of extensions: 7398668
Number of successful extensions: 29336
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29214
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)