Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0513
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    25   0.49 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.0  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   2.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   2.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   2.0  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    23   2.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.6  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.0  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 326 FSCTIPYKSPPVMWDPTLTFNGLNSQSTSL 237
           F   I    PP   +P +TFN LN   T L
Sbjct: 167 FLAIIACMGPPPQPEPPVTFNSLNGAHTPL 196


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -1

Query: 155 PSKMEPK-IPGPSSTDKGFPVRSTGSPTVTPEVSSYTWMVAMS 30
           P K  P+  P PSST    P + T   T  P  SS + M + S
Sbjct: 66  PWKKSPQGAPSPSSTPSSLPTQRTS--TSNPTYSSRSVMTSCS 106



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +1

Query: 499 VTEKLPA-NHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKT 621
           +T  L A NH L +GQ +L   +  +  G   +  +FG   T
Sbjct: 218 LTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGASFGLHAT 259


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 359 PKPREQLPISHRPGTTKSPTWCWRRSSTVSGRSTA 463
           P+P  ++P++  P    SP      SST S  S A
Sbjct: 80  PEPDPEIPVAPEPAPLASPLVQEPGSSTTSATSGA 114


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 130 QDQVLLTKAFQYGVLDHLQLHLKFLRIPG 44
           +D VL+T  ++ G+L  L+   + L +PG
Sbjct: 125 EDVVLVTLNYRLGILGFLRFEDQSLGVPG 153


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 130 QDQVLLTKAFQYGVLDHLQLHLKFLRIPG 44
           +D VL+T  ++ G+L  L+   + L +PG
Sbjct: 127 EDVVLVTLNYRLGILGFLRFEDQSLGVPG 155


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 130 QDQVLLTKAFQYGVLDHLQLHLKFLRIPG 44
           +D VL+T  ++ G+L  L+   + L +PG
Sbjct: 125 EDVVLVTLNYRLGILGFLRFEDQSLGVPG 153


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 130 QDQVLLTKAFQYGVLDHLQLHLKFLRIPG 44
           +D VL+T  ++ G+L  L+   + L +PG
Sbjct: 127 EDVVLVTLNYRLGILGFLRFEDQSLGVPG 155


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 130 QDQVLLTKAFQYGVLDHLQLHLKFLRIPG 44
           +D VL+T  ++ G+L  L+   + L +PG
Sbjct: 99  EDVVLVTLNYRLGILGFLRFEDQSLGVPG 127


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +2

Query: 281 DPTSPVEICMVLYMRTLWSSTGCWSRPKPREQLPISHRPGTTK 409
           D T PV++    +++    S G  S   P E LP+   PG  K
Sbjct: 314 DITEPVKV----FIQLRRPSDGATSEALPFELLPLDSEPGMLK 352


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 167 GR*IPSKMEPKIPGPSSTDKGFP 99
           GR  PS   P+I  PSST  G P
Sbjct: 63  GRKSPSS--PRISSPSSTKSGSP 83


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 347 CWSRPKPREQLPISHRP 397
           C SRPK +E  P  H P
Sbjct: 92  CTSRPKLQEPQPSQHCP 108


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 205  IPKGINVPSLAREVDW 252
            I  G +VP LA+ +DW
Sbjct: 1569 IDAGYDVPVLAQNLDW 1584


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = +2

Query: 392 RPGTTKSPTW-CWRRSSTVS 448
           RPG   +P W C R SS  +
Sbjct: 46  RPGVVTTPRWGCARASSATT 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.140    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,413
Number of Sequences: 336
Number of extensions: 4110
Number of successful extensions: 26
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)