Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0513
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 321 3e-88
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 289 2e-78
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 37 0.020
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 36 0.026
02_03_0138 - 15629421-15629440,15629521-15629752,15630115-156303... 31 1.3
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 30 1.7
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149... 30 1.7
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 30 2.3
11_06_0092 + 19973364-19975983,19976272-19976648 29 3.0
05_07_0004 + 26990250-26990516,26990877-26990931,26991286-269914... 29 3.0
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 29 3.0
01_07_0036 + 40647046-40647100,40647120-40647571,40648135-406482... 29 3.0
12_01_0869 + 8282399-8282858,8282990-8283066 29 3.9
12_01_0962 - 9579051-9579707,9579804-9580706 29 5.2
10_06_0112 + 10899079-10900656,10900761-10900920,10900948-109010... 29 5.2
08_02_1328 + 26170248-26170493,26170702-26170798,26171325-261713... 28 6.9
05_06_0108 - 25620685-25621115,25621517-25621602,25621963-25622507 28 6.9
02_03_0087 + 15073687-15074179,15074490-15074509 28 6.9
01_03_0219 - 13897138-13897525,13898798-13899062,13899359-13899455 28 6.9
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 28 6.9
12_02_0881 - 23970143-23970433,23970814-23971116,23971490-239720... 28 9.1
06_03_0970 + 26424209-26424910,26425053-26425109,26425251-264254... 28 9.1
02_04_0296 - 21685860-21686234 28 9.1
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 321 bits (789), Expect = 3e-88
Identities = 152/234 (64%), Positives = 183/234 (78%), Gaps = 5/234 (2%)
Frame = +1
Query: 13 IIRLEGDMATIQVYEETSGVTVGDPVLRTGK-----PLSVELGPGILGSIFDGIQRPLKD 177
IIRLEGD ATIQVYEET+G+ V DPVLRT K PLSVELGPGILG+IFDGIQRPLK
Sbjct: 55 IIRLEGDSATIQVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKT 114
Query: 178 INELTQSIYIPKGINVPSLAREVDWEFNPLNVKVGSHITGGDLYGIVHENTLVKHRMLVP 357
I + +YIP+G++VP+L ++ W F P + VG ITGGDLY IV+ENTL++H++ +P
Sbjct: 115 IAIKSGDVYIPRGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP 174
Query: 358 PKAKGTVTYIAPAGNYKVTDVVLETEFDGERQKYSMLQVWPVRQPRPVTEKLPANHPLLT 537
P A G ++YIAPAG Y + D VLE EF G +++++MLQ WPVR PRPV EKL A+ PLLT
Sbjct: 175 PGAMGKISYIAPAGQYSLQDTVLELEFQGIKKEFTMLQTWPVRSPRPVMEKLAADTPLLT 234
Query: 538 GQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYXNFDVIIYXGCGERXNQ 699
GQRVLD+LFP V GGT AIPGAFGCGKTVISQALSKY N ++Y GCGER N+
Sbjct: 235 GQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSQAVVYVGCGERGNE 288
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 289 bits (709), Expect = 2e-78
Identities = 142/229 (62%), Positives = 168/229 (73%)
Frame = +1
Query: 13 IIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELT 192
IIRLEGD ATIQVYEET+G+ V DPVLRT KPLSVELGPGILG+IFDGIQRPLK I +
Sbjct: 93 IIRLEGDSATIQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKS 152
Query: 193 QSIYIPKGINVPSLAREVDWEFNPLNVKVGSHITGGDLYGIVHENTLVKHRMLVPPKAKG 372
+YIP+G++VP+L ++ W+F P + VG ITGGDLY V ENTL+KH + +PP + G
Sbjct: 153 GDVYIPRGVSVPALDKDQLWDFEPKKLGVGDAITGGDLYATVFENTLMKHHVALPPGSMG 212
Query: 373 TVTYIAPAGNYKVTDVVLETEFDGERQKYSMLQVWPVRQPRPVTEKLPANHPLLTGQRVL 552
++YIAPAG Y LQ WPVR PRPV+ KL A+ PLLTGQRVL
Sbjct: 213 KISYIAPAGQYS-------------------LQTWPVRSPRPVSSKLAADTPLLTGQRVL 253
Query: 553 DSLFPCVQGGTTAIPGAFGCGKTVISQALSKYXNFDVIIYXGCGERXNQ 699
D+LFP V GGT AIPGAFGCGKTVISQALSKY N + ++Y GCGER N+
Sbjct: 254 DALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSEAVVYVGCGERGNE 302
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 IIRLEGDMATIQVYEETSGV-TVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINEL 189
++ ++G+ A +QV+E TSG+ V TG+ L + +LG IF+G +P+ + +
Sbjct: 100 VLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPI 159
Query: 190 TQSIYI 207
Y+
Sbjct: 160 LPEAYL 165
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 36.3 bits (80), Expect = 0.026
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 IIRLEGDMATIQVYEETSGV-TVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINEL 189
++ ++G+ A +QV+E TSG+ V TG+ L + +LG +F+G +P+ + +
Sbjct: 60 VLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPI 119
Query: 190 TQSIYI 207
Y+
Sbjct: 120 LPEAYL 125
>02_03_0138 -
15629421-15629440,15629521-15629752,15630115-15630348,
15630486-15630709,15631225-15631509,15631549-15631690
Length = 378
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 361 KAKGTVTYIAPAGNYKVTDVVLE 429
KA+ T++ AGNY+VTDVVLE
Sbjct: 71 KARMTISLDRGAGNYEVTDVVLE 93
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 641 DRAWEMTVLPQPKAPGMAVVPPCTQGKSESS 549
+R+W + PQP PG A++PP +GK +S
Sbjct: 745 ERSWALGRSPQPSPPGHALLPP--EGKEMTS 773
>06_01_0193 -
1491710-1491739,1492194-1492319,1492631-1492766,
1493048-1493112,1493213-1493305,1493433-1493498,
1493763-1493843,1493977-1494032,1494692-1494780,
1495340-1495425,1495531-1495647,1496109-1496254,
1496665-1496725,1496831-1496914,1497028-1497135,
1497286-1497388,1497802-1497845,1498100-1498584,
1499417-1499603,1500150-1500362,1501066-1501323
Length = 877
Score = 30.3 bits (65), Expect = 1.7
Identities = 30/118 (25%), Positives = 49/118 (41%)
Frame = +1
Query: 61 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAR 240
+ +TVGD V+ G + L LGS++ ++ L D+ + Q + GI A+
Sbjct: 555 SGALTVGDLVMVNGLLFQLSLPLNFLGSVYRESRQSLIDMKSMFQLLEEKPGIKDEPHAQ 614
Query: 241 EVDWEFNPLNVKVGSHITGGDLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKVT 414
PL K G +G V E ++K P K +V + +G+ K T
Sbjct: 615 -------PLQFKGGRIEFENVHFGYVPERKILKGATFTVPAGK-SVAIVGTSGSGKST 664
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = -3
Query: 645 LGQSLGDDSFAATEGPGDGRGTSLHAREERVEHALPGEQRVVGGQLLGD 499
LG S GD+ A+T GP RG R R P R GG GD
Sbjct: 85 LGLSSGDEGEASTRGPAASRG----GRRGRDSRGPPPRSRFGGGDFGGD 129
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 43 IQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 171
I V E +G+ D RTG L + PG+ G + D + R L
Sbjct: 892 ILVLETVTGMRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKL 934
>05_07_0004 +
26990250-26990516,26990877-26990931,26991286-26991461,
26991702-26991923,26992001-26992239,26992437-26992962,
26993042-26993315,26993391-26994009,26994082-26994121,
26994263-26994310,26994548-26994814,26994892-26995155,
26995260-26995904
Length = 1213
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 520 NHPLLTGQRVLDSLFPCVQGGTT-AIPGAFGCGKTVISQALSKY 648
++P + Q + D CV GTT AI G G GK+ + + ++
Sbjct: 377 SYPSRSEQLIFDGFSMCVSNGTTMAIVGESGSGKSTVINLVERF 420
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 533 SSGWLAGSFSVTGRGWRTGHTCNMLYFCR 447
+SGWLAG+ V G G T + +L CR
Sbjct: 43 TSGWLAGALGVAGAGAATFYCMLLLLDCR 71
>01_07_0036 +
40647046-40647100,40647120-40647571,40648135-40648257,
40648407-40648461,40648613-40648722,40649352-40649531,
40650003-40650101,40651182-40651280,40652195-40652289,
40652290-40652378,40652739-40652901,40653299-40653404,
40655647-40655829,40656059-40656286,40656373-40656486
Length = 716
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 190 TQSIYIPKGINVPSLAREVDWEFNPLNVKVGS--HITGGDLYGIVHENTLVKHRMLVPPK 363
++S+ IPKGI +PS D E + N K S G DL + H+N LV PK
Sbjct: 457 SKSLKIPKGIKIPSYCNGCDCEGDCANNKNCSCAQRNGSDLPYVSHKNI----GRLVEPK 512
Query: 364 A 366
A
Sbjct: 513 A 513
>12_01_0869 + 8282399-8282858,8282990-8283066
Length = 178
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 542 SACSTRSSLACKEVPRPSPGPSVAAKLSSPKLCP 643
S S ++L + P PSP PS A+ +S +L P
Sbjct: 22 SPTSGSTALVSRRSPSPSPAPSAASATASSRLLP 55
>12_01_0962 - 9579051-9579707,9579804-9580706
Length = 519
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 371 PLALGGTNILCLTRVFSCTIPYKSPPVMWDPTLTFN 264
P LGG +I TRVF T P +WD L ++
Sbjct: 382 PCTLGGYDIPARTRVFINTFAMGRDPEIWDNPLEYS 417
>10_06_0112 +
10899079-10900656,10900761-10900920,10900948-10901028,
10901264-10901517
Length = 690
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -1
Query: 356 GTNILCLTRVFSCTIPYKSPPVMWDPTLTFNGLNSQSTSLAREGTL 219
GTN T+ +P + PP + D TF+ L Q ++ E TL
Sbjct: 214 GTNDQICTQQLMALVPPRLPPELADAAATFSPLAPQGVTVKDERTL 259
>08_02_1328 +
26170248-26170493,26170702-26170798,26171325-26171342,
26171566-26171666,26173486-26173562,26173736-26173802,
26176467-26176577,26176652-26176749,26176834-26176903
Length = 294
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 623 TVLPQPKAPGMAVVPPCTQGKSESSTRCPVSSGWLAGSFSVTGRGWRTGH 474
++LP P P A T S RC +++ A +S +GWR H
Sbjct: 3 SLLPSPVFPTAAAAAASTSSSSRCRCRCRITTSSSAHGWS-NCQGWRLHH 51
>05_06_0108 - 25620685-25621115,25621517-25621602,25621963-25622507
Length = 353
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 629 EMTVLPQPKAPGMAVVPPCTQGKSESSTRCPVSSG 525
E+ LP P +PG PP T PVS+G
Sbjct: 127 EVLALPPPPSPGTPAPPPPAAEAQSPVTPAPVSTG 161
>02_03_0087 + 15073687-15074179,15074490-15074509
Length = 170
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 593 MAVVPPCTQGKSESSTRCPVSSGWLAGSFSVTG 495
MA+VP +G+ E+S R P ++ AGS ++ G
Sbjct: 79 MALVPGGQEGREETSLRDPDAAAAAAGSCTIVG 111
>01_03_0219 - 13897138-13897525,13898798-13899062,13899359-13899455
Length = 249
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 641 DRAWEMTVLPQPKAPGMAVVPPCTQGKSESSTRCPVSSG 525
D W V Q K A PCT SSTRCP++ G
Sbjct: 145 DSEWAAHVDQQHK---QAKAMPCTSACHFSSTRCPIARG 180
>01_01_0623 +
4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = -1
Query: 614 PQPKAPGMAVVPPCT---QGKSESSTRCPVSSG-WLAGSFSVTGRG 489
P P P +A C GK STRC VS L G +TG G
Sbjct: 56 PPPPPPPVAPAATCEGDLHGKGNFSTRCEVSEEVELGGDVYITGEG 101
>12_02_0881 -
23970143-23970433,23970814-23971116,23971490-23972077,
23972606-23972761,23972852-23972910,23974294-23974561
Length = 554
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 109 LSVELGPGILGSIFDGIQRPLKDINELTQSI---YIPKGINVPSLAREVDWE 255
L LGP +LG DG R ++D+ + I +P + VP E W+
Sbjct: 92 LGRRLGPRLLGRGNDGSMRVMRDLYRMLDEINSEEVPVDLKVPDSFDEFIWD 143
>06_03_0970 +
26424209-26424910,26425053-26425109,26425251-26425478,
26425788-26425881,26425955-26426161,26426581-26426711,
26426943-26426992,26427125-26427432,26427548-26427651,
26427810-26428526,26429159-26429338,26429703-26429831
Length = 968
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 426 QHHVGDFVVPGRCDIGNCSLGFGRDQHPVL 337
+HH GD VV RCD+ + +G P+L
Sbjct: 570 EHHEGDEVVWLRCDVYDTGIGIPEKSLPLL 599
>02_04_0296 - 21685860-21686234
Length = 124
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 596 GMAVVPPCTQGKSESSTRCPVSSGWLAGSFSVTGRGWR 483
G A V + + S++R +SGW A + S RGWR
Sbjct: 54 GAAAVAAGEKTRQRSASR-EETSGWSAAASSAVARGWR 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.140 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,069,781
Number of Sequences: 37544
Number of extensions: 534235
Number of successful extensions: 2086
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2080
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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